CF835168

Overview
NameCF835168
Unique NameCF835168
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length397
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROF_TOBAC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Nicotiana tabacum GN=DHAPS-1 PE=2 SV=1)

HSP 1 Score: 227.254 bits (578), Expect = 1.921e-59
Identity = 107/123 (86.99%), Postives = 115/123 (93.50%), Query Frame = 1
Query:   28 LDSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            LDSTSGLYYDCSAHF+WVGERT+ LDGAHVEFL+GVANPLGIKVSDKMDP+ LV LI+ILNP NK GRITIIT MGAENMRVKLPHLIRA RR+GQIVTWVSDPMHGNT++APCGLKT PFDS
Sbjct:  333 LDSTSGLYYDCSAHFIWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPSALVKLIEILNPDNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDS 455          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROF_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum tuberosum GN=SHKA PE=1 SV=2)

HSP 1 Score: 226.483 bits (576), Expect = 3.276e-59
Identity = 106/122 (86.89%), Postives = 114/122 (93.44%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGLYYDCSAHFLWVGERT+ LDGAHVEFL+G+ANPLGIKVSDKMDP+ LV LI+ILNP NK GRITIIT MGAENMRVKLPHLIRA RR+GQIVTWVSDPMHGNT++APCGLKT PFDS
Sbjct:  333 DSTSGLYYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDS 454          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROG_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 1.245e-58
Identity = 105/122 (86.07%), Postives = 114/122 (93.44%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGL+YDCSAHFLWVGERT+ LDGAHVEFL+G+ANPLGIKVSDKMDP+ LV LI+ILNP NK GRITIIT MGAENMRVKLPHLIRA RR+GQIVTWVSDPMHGNT++APCGLKT PFDS
Sbjct:  333 DSTSGLHYDCSAHFLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMDPSALVKLIEILNPQNKAGRITIITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDS 454          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROG_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS2 PE=2 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 6.178e-58
Identity = 103/122 (84.43%), Postives = 113/122 (92.62%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGL+YDCSAH LWVGERT+ LDGAHVEFL+GVANPLGIKVSDKM+P +LV LI+ILNP NKPGRITIIT MGAENMRVKLPHLIRA R SGQIVTW++DPMHGNT++APCGLKT PFDS
Sbjct:  324 DSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPRDLVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRNSGQIVTWITDPMHGNTIKAPCGLKTRPFDS 445          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROF_ORYSJ (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Oryza sativa subsp. japonica GN=DAHPS1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 8.921e-57
Identity = 101/122 (82.79%), Postives = 112/122 (91.80%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DST+G +YDCSAH LWVGERT+ LDGAHVEFL+GVANPLGIKVSDKM+P ELV LI+ILNP NKPGRITIIT MGAENMRVKLPHLIRA R +GQIVTW++DPMHGNT++APCGLKT PFDS
Sbjct:  339 DSTTGHFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMNPTELVKLIEILNPSNKPGRITIITRMGAENMRVKLPHLIRAVRHAGQIVTWITDPMHGNTIKAPCGLKTRPFDS 460          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROF_CATRO (Probable phospho-2-dehydro-3-deoxyheptonate aldolase, chloroplastic OS=Catharanthus roseus GN=DHS1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 8.921e-57
Identity = 102/122 (83.61%), Postives = 111/122 (90.98%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGL+YDCSAH LWVGERT+ LDGAHVEFL+GVANPLGIKVS KMDPNELVNLI+ILNP NKPGRIT+I  MGAENMRVKLPHLIRA R +GQIVTWV DPMHGNT++APCGLKT  FD+
Sbjct:  297 DSTSGLFYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELVNLIEILNPTNKPGRITVIVRMGAENMRVKLPHLIRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDA 418          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROF_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=DHS1 PE=2 SV=2)

HSP 1 Score: 218.394 bits (555), Expect = 8.921e-57
Identity = 101/123 (82.11%), Postives = 112/123 (91.06%), Query Frame = 1
Query:   28 LDSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            LDSTSGLYYDCSAH +W GERT+ LDGAHVEFL+G+ANPLGIKVS+KMDP ELV L++ILNP+NKPGRIT+I  MGAENMRVKLPHLIRA RRSGQIVTWV DPMHGNT++APCGLKT  FDS
Sbjct:  318 LDSTSGLYYDCSAHMVWCGERTRQLDGAHVEFLRGIANPLGIKVSNKMDPFELVKLVEILNPNNKPGRITVIVRMGAENMRVKLPHLIRAVRRSGQIVTWVCDPMHGNTIKAPCGLKTRAFDS 440          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROG_SOLTU (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Solanum tuberosum GN=SHKB PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 2.197e-55
Identity = 99/122 (81.15%), Postives = 109/122 (89.34%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGL+YDCSAH +WVGERT+ LDGAHVEFL+GVANPLGIKVS KMDPNEL+ LIDILNP NKPGRIT+I  MGAENMRVKL HL+RA R +GQIVTWV DPMHGNT++APCGLKT  FDS
Sbjct:  306 DSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPNELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDS 427          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROF_SOLLC (Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 1.091e-54
Identity = 98/122 (80.33%), Postives = 108/122 (88.52%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGL+YDCSAH +WVGERT+ LDGAHVEFL+GVANPLGIKVS KMDP EL+ LIDILNP NKPGRIT+I  MGAENMRVKL HL+RA R +GQIVTWV DPMHGNT++APCGLKT  FDS
Sbjct:  306 DSTSGLFYDCSAHMVWVGERTRQLDGAHVEFLRGVANPLGIKVSQKMDPKELIKLIDILNPANKPGRITVIVRMGAENMRVKLSHLVRAVRGAGQIVTWVCDPMHGNTIKAPCGLKTRAFDS 427          
BLAST of CF835168 vs. ExPASy Swiss-Prot
Match: AROG_ARATH (Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=DHS2 PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 5.412e-54
Identity = 99/122 (81.15%), Postives = 109/122 (89.34%), Query Frame = 1
Query:   31 DSTSGLYYDCSAHFLWVGERTKHLDGAHVEFLKGVANPLGIKVSDKMDPNELVNLIDILNPHNKPGRITIITTMGAENMRVKLPHLIRACRRSGQIVTWVSDPMHGNTVQAPCGLKTPPFDS 396
            DSTSGLYYDCSAH LWVGERT+ LDGAHVEFL+G+ANPLGIKVSDKM P+ELV LI+ILNP NKPGRIT+I  MGAENMRVKLP+LIRA R +GQIVTWVSDPMHGNT+ AP GLKT  FD+
Sbjct:  296 DSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGIANPLGIKVSDKMVPSELVKLIEILNPQNKPGRITVIVRMGAENMRVKLPNLIRAVRGAGQIVTWVSDPMHGNTIMAPGGLKTRSFDA 417          
The following BLAST results are available for this feature:
BLAST of CF835168 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
AROF_TOBAC1.921e-5986.99Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_SOLTU3.276e-5986.89Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLLC1.245e-5886.07Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROG_ORYSJ6.178e-5884.43Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_ORYSJ8.921e-5782.79Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROF_CATRO8.921e-5783.61Probable phospho-2-dehydro-3-deoxyheptonate aldola... [more]
AROF_ARATH8.921e-5782.11Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_SOLTU2.197e-5581.15Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]
AROF_SOLLC1.091e-5480.33Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chl... [more]
AROG_ARATH5.412e-5481.15Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chl... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M16_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835168 ID=CF835168; Name=CF835168; organism=Citrus sinensis; type=EST; length=397bp
TGCCATATGAACAATCTCTAACCCGCGCTGGATTCAACTTCTGGGCTTTA
CTATGATTGCTCTGCCCATTTTCTTTGGGTTGGAGAACGTACCAAGCACC
TGGATGGTGCGCATGTTGAGTTTTTGAAAGGTGTAGCAAATCCCCTTGGC
ATTAAGGTCAGTGATAAAATGGATCCTAATGAGCTAGTGAACCTTATTGA
CATTTTGAATCCTCATAATAAACCGGGGAGGATAACTATTATCACTACAA
TGGGTGCTGAGAACATGAGAGTGAAGCTTCCTCATCTAATTAGGGCATGC
CGCCGCTCTGGCCAAATTGTTACATGGGTCAGTGACCCTATGCATGGGAA
CACCGTCCAGGCTCCCTGCGGCCTGAAAACTCCTCCCTTCGATTCTA
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