CF835170
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 386.726 bits (992), Expect = 6.342e-107 Identity = 190/236 (80.51%), Postives = 217/236 (91.95%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 GV TSSG+KKG+LFLADVNTQLKNKN+TTD+KVDT SNLFTTITVDE APGLKTILSF+VPDQRSGK+E+QYLHDYAGI TS GLTANPIVNFS V+GTN+++LGTD+SFD+K+G+FTKCNAGLSF NADL+ASLNLNNKGD+L ASYYH V+PL TAVGAEV HSFST +N ITVGTQH LDPLT++KAR+NN G ASAL+QHEWRPKSLFT+SGEVDTK+++K AKFGLALA Sbjct: 38 GVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALA 273
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 369.007 bits (946), Expect = 1.368e-101 Identity = 183/236 (77.54%), Postives = 215/236 (91.10%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 GVA T+SG KKGELFLADV+TQLKNKNITTD+KVDT SN++TTITVDEPAPGLKTI SF VPDQ+SGKVELQYLH+YAGI+TS GLTA+P+VNFS V G N ++LGTDLSFD+ +GNFTKCNAGLSF+++DLIASL LN+KGD+++ASYYH V P+ TAVGAE+ HSFS+ +NT+T+GTQH+LDPLTT+KARVN+ G ASALIQHEWRPKSLFTISGEVDT+AIEKSAK GLA+A Sbjct: 38 GVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVA 273
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 350.132 bits (897), Expect = 6.578e-96 Identity = 178/236 (75.42%), Postives = 199/236 (84.32%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 GVA TSSGTKKGELFL DVNTQLKNKNITTD+KVDT SNLFTTITV+EPAPG+K ILSFKVP+Q SGKVELQYLH+YAGIS+S GL ANPIVNFS+VIGTN L+ G D+SFD+K G TK NA ++F DLI SL LN KGD L+ASYYH +NPL TAVG ++ H FST +NT T+GTQH LDPLTT+K RV N+G ASALIQHEWRPKSL TIS EVDTKAIEKSAK GL+LA Sbjct: 38 GVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAINPLSNTAVGVDISHRFSTKENTFTLGTQHALDPLTTVKGRVTNSGKASALIQHEWRPKSLITISSEVDTKAIEKSAKIGLSLA 273
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 342.043 bits (876), Expect = 1.791e-93 Identity = 177/236 (75.00%), Postives = 198/236 (83.90%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL--TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 GVA TS+GTKKG+L L DV Q + KNITTDLKV T S T TVDE APGL++I SFKVPDQ SGKVELQYLH+YAGISTS GLT NP VNFS VIG+NVL++GTD+SFD+KSGNFTK NAGLSF DLIASL +N+KGD L ASYYH VNPL TAVGAEV H S+ D+TITVGTQH LDPLT++KARVN+AGIASALIQHEW+PKS FTISGEVDTK+I+KSAK GLALA Sbjct: 38 GVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALA 273
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 323.939 bits (829), Expect = 5.049e-88 Identity = 158/234 (67.52%), Postives = 190/234 (81.20%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 GVA T++GT KG LFL DV TQ+KN N T D+KV T S+L TT+T DEPAPGLK I+ K+PD +SGK E+QY HDYAGISTS G TA PIVNFS V+GTN LSLGTD++++++SGNF NAG +F DL ASL LN+KG+ L ASYY V+P T VGAE+ H+F+T +N ITVGTQH LDPLTT+KARVNNAG+A+ALIQHEWRPKS FT+SGEVD+KAI+KSAK G+ALA Sbjct: 38 GVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASYYQIVSPSTVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANALIQHEWRPKSFFTVSGEVDSKAIDKSAKVGIALA 271
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 318.161 bits (814), Expect = 2.770e-86 Identity = 156/235 (66.38%), Postives = 193/235 (82.13%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDEPAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVN-PLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 GVA T++ TKK +L ++ +Q+KNKNIT D+K ++ SN+ TT+TVDE PGLK+ILSF VPDQRSGK ELQY HDYAG+S S GLTA+P+VN S+V GT L++G D+S D+ +GN TK NAGLSF+N DLIASLNLNNKGDSL ASYYH VN TAVGAE+ HSFS+ +N++T GTQH LDPLT +KAR NN+G ASAL+QHEWRPKS++TIS EVDTKAI+KS+K G+A+A Sbjct: 37 GVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYHIVNHSATAVGAELTHSFSSNENSLTFGTQHTLDPLTVVKARFNNSGKASALLQHEWRPKSVWTISAEVDTKAIDKSSKVGIAVA 271
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.089e-82 Identity = 155/236 (65.68%), Postives = 190/236 (80.51%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPL-TAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLALA 703 G A T++ TKK +L + ++ +Q+KNKNIT D+K ++ASN+ TTIT D+ APGLKTILSF VPDQ+SGKVELQYLHDYAGI+ S GLTANP+VN S GT+ L++G D+S D+ + NF K NA LS+ N DLIASLNLNNKGDSL ASYYH V TAVGAE+ HSFS+ +N++T GTQH LDPLT +KAR+NN+G ASALIQHE+ PKSL TIS EVDTKAIEKS+K G+A+A Sbjct: 37 GPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIA 272
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.177e-74 Identity = 139/236 (58.90%), Postives = 180/236 (76.27%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNKNITTDLKVDTASNLFTTITVDE-PAPGLKTILSFKVPDQRSGKVELQYLHDYAGISTSDGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFV--NPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSAKFGLAL 700 GVA T++GT+K E +++TQ+KNK +T D+K ++ S+L TTITVDE PGLK+I++ VPDQRSGK+E QYLH+YAG++ S GL +NP+VN S G+ LS+G D+SFD+ + +FTK NA LS + DLIASL+LNN GD+L ASYYH V + TAVGAE+ HS S ++T+ G+QH LDP TT+K R NN G+ASAL+QHEWRPKS TISG+VDTKAIEKS K GL+L Sbjct: 38 GVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKNHSGTAVGAELSHSMSRNESTLIFGSQHSLDPHTTIKTRFNNYGMASALVQHEWRPKSFVTISGDVDTKAIEKSTKVGLSL 273
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC2_XENLA (Voltage-dependent anion-selective channel protein 2 OS=Xenopus laevis GN=vdac2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12 Identity = 67/245 (27.35%), Postives = 103/245 (42.04%), Query Frame = 2 Query: 2 GVATTSSGTKKGELFLADVNTQLKNK----NITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVP-----DQRSGKVELQYLHDYAGISTS-DGLTANPIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSA-KFGLAL 700 GV T+SGT + + + + K K +T K +T + L T I + D+ A GLK L+F ++SGKV+ Y +Y + D A P ++ SAV+G G ++FDS TK N + + D N+N+ G A S Y V+ + + + ++ LD + A+VNN+ + RP T+S VD K I K GL L Sbjct: 37 GVEFTTSGTSNTDSGKVNGSLETKYKWGEYGLTFTEKWNTDNTLGTEIAIEDQIAKGLK--LTFDTTFSPNTGKKSGKVKAAYKQEYVNLGCDVDFDFAGPAIHGSAVVGYEGWLAGYQMTFDSAKSKLTKNNFAVGYKTGDFQLHTNVND-GSEFAGSIYQKVSDKMETAVNLAWTSGNNSTRFGIAAKYQLDSHAAISAKVNNSSLVGVGYTQTLRPGVKLTLSALVDGKNINAGGHKLGLGL 278
BLAST of CF835170 vs. ExPASy Swiss-Prot
Match: VDAC_DROME (Voltage-dependent anion-selective channel OS=Drosophila melanogaster GN=porin PE=1 SV=3) HSP 1 Score: 70.4774 bits (171), Expect = 1.006e-11 Identity = 58/234 (24.79%), Postives = 106/234 (45.30%), Query Frame = 2 Query: 20 SGTKKGELFLA-DVNTQLKNKNITTDLKVDTASNLFTTITV-DEPAPGLKTILSFKVPDQ---RSGKVELQYLHDYAGISTSDGLTAN-PIVNFSAVIGTNVLSLGTDLSFDSKSGNFTKCNAGLSFNNADLIASLNLNNKGDSLAASYYHFVNPLTAVGAEVIHSFSTTDNTITVGTQHILDPLTTLKARVNNAGIASALIQHEWRPKSLFTISGEVDTKAIEKSA-KFGLAL 700 S + G++F + + ++K+ +T K +T + LFT + V D+ GLK L Q ++GK ++ Y H+ + + P++N SAV+G G +FD++ T N L + D + +N+ G + S + + VG ++ + T++ +G ++ LD +++A+VNNA Q + R T+S VD K K G+ L Sbjct: 46 SNQESGKVFGSLETKYKVKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVND-GQEFSGSIFQRTSDKLDVGVQLSWASGTSNTKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLVDGKNFNAGGHKIGVGL 278 The following BLAST results are available for this feature:
BLAST of CF835170 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835170 ID=CF835170; Name=CF835170; organism=Citrus sinensis; type=EST; length=705bpback to top |