CF835190
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_ARATH (Signal recognition particle 9 kDa protein OS=Arabidopsis thaliana GN=SRP9 PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.798e-50 Identity = 93/103 (90.29%), Postives = 99/103 (96.12%), Query Frame = -2 Query: 155 MVYVTSWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFALMARGPDVDLSEVTGKEQMEAQPAKKGRGRKQ 463 MVY+ SWDEFV+RSVQL++ADP+STRY MKYRHCDGKLVLKVTDNKECLKFKTDQAQ+AKKMEKLNNIFF LMARGPDVDLSEVTGKEQME QPAKKGRGRKQ Sbjct: 1 MVYIASWDEFVDRSVQLFRADPESTRYVMKYRHCDGKLVLKVTDNKECLKFKTDQAQEAKKMEKLNNIFFTLMARGPDVDLSEVTGKEQMETQPAKKGRGRKQ 103
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_MAIZE (Signal recognition particle 9 kDa protein OS=Zea mays GN=SRP9 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 2.817e-45 Identity = 85/103 (82.52%), Postives = 95/103 (92.23%), Query Frame = -2 Query: 155 MVYVTSWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFALMARGPDVDLSEVTGKEQMEAQPAKKGRGRKQ 463 MVYV SW+EFVERSVQL++ DP +TRY MKYRHC+GKLVLKVTD++ECLKFKTDQAQDAKKMEKLNNIFFALM RGPDVD+SEV+GKEQ E Q AKKGRGR+Q Sbjct: 1 MVYVDSWEEFVERSVQLFRGDPNATRYVMKYRHCEGKLVLKVTDDRECLKFKTDQAQDAKKMEKLNNIFFALMTRGPDVDISEVSGKEQAEQQQAKKGRGRRQ 103
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_DICDI (Signal recognition particle 9 kDa protein OS=Dictyostelium discoideum GN=srp9 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 7.994e-16 Identity = 34/71 (47.89%), Postives = 55/71 (77.46%), Query Frame = -2 Query: 248 VYVTSWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFAL 460 +Y+ WDEF ++S QLY+ DP+ TR+ K+RH +GK+VLKVT++ LKF+TD+ D K+++++N++FF L Sbjct: 1 MYIEDWDEFYDKSEQLYRTDPKRTRFSFKFRHVEGKVVLKVTNDTVNLKFQTDKENDFKRIDQINSLFFRL 71
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_CAEEL (Signal recognition particle 9 kDa protein OS=Caenorhabditis elegans GN=ZK512.4 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.729e-14 Identity = 33/67 (49.25%), Postives = 49/67 (73.13%), Query Frame = -2 Query: 263 MVYVTSWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNN 463 M Y TSWDEF + + +L+ A+P+ R+ KY H G+LVLK+TD+ CL++ T+Q QD KK+EKL++ Sbjct: 1 MTYFTSWDEFAKAAERLHSANPEKCRFVTKYNHTKGQLVLKLTDDVVCLQYSTNQLQDVKKLEKLSS 67
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_HUMAN (Signal recognition particle 9 kDa protein OS=Homo sapiens GN=SRP9 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = -2 Query: 245 SWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFALM 448 +W+EF + +LY ADP R +KYRH DG L +KVTD+ CL +KTDQAQD KK+EK ++ LM Sbjct: 6 TWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTDQAQDVKKIEKFHSQLMRLM 73
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_CANFA (Signal recognition particle 9 kDa protein OS=Canis familiaris GN=SRP9 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 9.772e-14 Identity = 35/73 (47.95%), Postives = 47/73 (64.38%), Query Frame = -2 Query: 245 MVYVTSWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFALM 463 M +W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD KK+EK ++ LM Sbjct: 1 MAQYQTWEEFSRAAEKLYLADPMKARVVLKYRHSDGSLCIKVTDDLVCLVYRTDQAQDVKKIEKFHSQLMRLM 73
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_MOUSE (Signal recognition particle 9 kDa protein OS=Mus musculus GN=Srp9 PE=1 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 1.667e-13 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = -2 Query: 245 SWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFALM 448 +W+EF + +LY ADP R +KYRH DG L +KVTD+ CL ++TDQAQD KK+EK ++ LM Sbjct: 6 TWEEFSRAAEKLYLADPMKVRVVLKYRHVDGNLCIKVTDDLVCLVYRTDQAQDVKKIEKFHSQLMRLM 73
BLAST of CF835190 vs. ExPASy Swiss-Prot
Match: SRP09_MACFA (Signal recognition particle 9 kDa protein OS=Macaca fascicularis GN=SRP9 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.843e-13 Identity = 34/68 (50.00%), Postives = 46/68 (67.65%), Query Frame = -2 Query: 245 SWDEFVERSVQLYKADPQSTRYCMKYRHCDGKLVLKVTDNKECLKFKTDQAQDAKKMEKLNNIFFALM 448 +W+EF + +LY ADP R +KYRH DG L +KVTD+ CL +KT+QAQD KK+EK ++ LM Sbjct: 6 TWEEFSRAAEKLYLADPMKARVVLKYRHSDGNLCVKVTDDLVCLVYKTEQAQDVKKIEKFHSQLMRLM 73 The following BLAST results are available for this feature:
BLAST of CF835190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835190 ID=CF835190; Name=CF835190; organism=Citrus sinensis; type=EST; length=671bpback to top |