CF835193

Overview
NameCF835193
Unique NameCF835193
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length647
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1791 contig Csv1_Contig1791:143..789. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH1_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH1 PE=1 SV=1)

HSP 1 Score: 251.906 bits (642), Expect = 2.084e-66
Identity = 126/146 (86.30%), Postives = 139/146 (95.21%), Query Frame = -1
Query:  210 TDVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 647
            TDVARKV ILARESGLKL+L  LPV++LVP+PL+ACASAEEFM++LPQFDEEL+KQR+EAE AGEVLRYVGVVDA+ K+G VEL+RYKKDHPFAQLSG+DNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLA YLGAPS
Sbjct:  766 TDVARKVTILARESGLKLDLEGLPVQNLVPKPLQACASAEEFMEKLPQFDEELSKQREEAEAAGEVLRYVGVVDAVEKKGTVELKRYKKDHPFAQLSGADNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLAFYLGAPS 911          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH2_ARATH (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Arabidopsis thaliana GN=AKHSDH2 PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.133e-65
Identity = 121/146 (82.88%), Postives = 138/146 (94.52%), Query Frame = -1
Query:  210 TDVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 647
            TDVARKVIILARESGLKL+L+DLP+RSLVPEPLK C S EEFM++LPQ+D +LAK+R +AE++GEVLRYVGVVDA+N++G VELRRYKK+HPFAQL+GSDNIIAFTT RYK+ PLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS
Sbjct:  771 TDVARKVIILARESGLKLDLADLPIRSLVPEPLKGCTSVEEFMEKLPQYDGDLAKERLDAENSGEVLRYVGVVDAVNQKGTVELRRYKKEHPFAQLAGSDNIIAFTTTRYKDHPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 916          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH2_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic OS=Zea mays GN=AKHSDH2 PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 4.805e-63
Identity = 115/146 (78.77%), Postives = 136/146 (93.15%), Query Frame = -1
Query:  210 TDVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 647
            TDVARKV++LARESGL+LELSD+PV+SLVPE L +C+SA+EFM++LP FDE+ A+QR +AE AGEVLRYVG +DA+N+ G+VELRRY++DHPFAQLSGSDNIIAFTT RYKEQPLIVRGPGAGA+VTAGG+F DILRLASYLGAPS
Sbjct:  772 TDVARKVVVLARESGLRLELSDIPVKSLVPETLASCSSADEFMQKLPSFDEDWARQRSDAEAAGEVLRYVGALDAVNRSGQVELRRYRRDHPFAQLSGSDNIIAFTTSRYKEQPLIVRGPGAGAEVTAGGVFCDILRLASYLGAPS 917          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH1_MAIZE (Bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic OS=Zea mays GN=AKHSDH1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.067e-62
Identity = 116/146 (79.45%), Postives = 135/146 (92.47%), Query Frame = -1
Query:  210 TDVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 647
            TDVARKVIILARESGL LELSD+PVRSLVPE LK+C SA+E+M++LP FDE+ A++R+ AE AGEVLRYVGVVD ++K+G+VELR YK+DHPFAQLSGSDNIIAFTT RYK+QPLIVRGPGAGA+VTAGG+F DILRL+SYLGAPS
Sbjct:  775 TDVARKVIILARESGLGLELSDIPVRSLVPEALKSCTSADEYMQKLPSFDEDWARERKNAEAAGEVLRYVGVVDVVSKKGQVELRAYKRDHPFAQLSGSDNIIAFTTSRYKDQPLIVRGPGAGAEVTAGGVFCDILRLSSYLGAPS 920          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH_DAUCA (Bifunctional aspartokinase/homoserine dehydrogenase, chloroplastic (Fragment) OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.019e-61
Identity = 115/146 (78.77%), Postives = 136/146 (93.15%), Query Frame = -1
Query:  210 TDVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGAPS 647
            TDVARKVIILAR SGLKLELSD+PV+SLVPEPL+  ASAEEF+ QLPQFD ++ ++R++AE+AGEVLRYVGVVDA+N++G VEL+RYKK+HPFAQLSGSDNI AFTT+RY +QP I+RGPGAGA+VTAGG+FSDILRLASYLGAPS
Sbjct:  776 TDVARKVIILARGSGLKLELSDIPVQSLVPEPLRGIASAEEFLLQLPQFDSDMTRKREDAENAGEVLRYVGVVDAVNQKGVVELKRYKKEHPFAQLSGSDNINAFTTERYNKQPPIIRGPGAGAEVTAGGVFSDILRLASYLGAPS 921          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: DHOM_SCHPO (Probable homoserine dehydrogenase OS=Schizosaccharomyces pombe GN=SPBC776.03 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.009e-36
Identity = 77/144 (53.47%), Postives = 101/144 (70.14%), Query Frame = -1
Query:  216 DVARKVIILARESGLKLE-LSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYLGA 644
            DVARKV IL+R +G+ +E  S  PV+SL+PEPLK+  +AEEF+  LP FD E A  R+EAE  G+V+R+VG  D  NK   V+L +Y   HPFA L  SDNII+FTTKRY  +PL+V G GAGA VTA G+  D++++ S + A
Sbjct:  227 DVARKVTILSRIAGVHVESASSFPVKSLIPEPLKSAVNAEEFLAGLPNFDSEFASMREEAEKEGKVVRFVGEADVANKTTLVKLEKYDASHPFANLQSSDNIISFTTKRYHTRPLVVIGAGAGAAVTAAGVLGDMIKIMSQVRA 370          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: DHOM_YEAST (Homoserine dehydrogenase OS=Saccharomyces cerevisiae GN=HOM6 PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.146e-30
Identity = 63/142 (44.37%), Postives = 99/142 (69.72%), Query Frame = -1
Query:  222 DVARKVIILARESGLKLEL-SDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 644
            DVARKV I+ R SG+++E  +  PV+SL+P+PL++  SA+EF+++L  +D++L + ++EA    +VLR++G VD   K   V + +Y   HPFA L GSDN+I+  TKRY   P++++G GAGA VTA G+  D++++A  L
Sbjct:  219 DVARKVTIVGRISGVEVESPTSFPVQSLIPKPLESVKSADEFLEKLSDYDKDLTQLKKEAATENKVLRFIGKVDVATKSVSVGIEKYDYSHPFASLKGSDNVISIKTKRY-TNPVVIQGAGAGAAVTAAGVLGDVIKIAQRL 359          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: DHOM_EMENI (Homoserine dehydrogenase OS=Emericella nidulans GN=AN2882 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.539e-29
Identity = 70/146 (47.95%), Postives = 98/146 (67.12%), Query Frame = -1
Query:  222 DVARKVIILARESGLKLELSD-LPVRSLVPEPLKACASAEE----FMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASYL 644
            DVARK+ ILAR +GL ++  D  P+ SL+P  L +  S+ +    FM +LP+FD ++A  ++ AE AG+V+RYVG VD   KE RV L+++ KD   A L GSDNII+F T+RY   PLIV+G GAG  VTA G+ +D+L++   L
Sbjct:  223 DVARKLTILARIAGLDVQSPDSFPIESLIPAELTSLPSSADGIAQFMARLPEFDSQMAAIKEGAEKAGKVVRYVGSVDVAKKEVRVGLQQFDKDSAIAGLKGSDNIISFYTRRYGSNPLIVQGAGAGGDVTAMGVTADLLKVIERL 368          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AK1H_SERMA (Bifunctional aspartokinase/homoserine dehydrogenase 1 OS=Serratia marcescens GN=thrA PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.046e-25
Identity = 61/142 (42.96%), Postives = 92/142 (64.79%), Query Frame = -1
Query:  225 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKD--HPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILRLASY 644
            DVARK++ILARE+G KLELSD+ V  ++P    A    + F+ +LP+ D+E A+    A + G+VLRYVG++D    EGR ++R    D   P  ++   +N +AF ++ Y+  PL++RG GAG  VTA G+F+D+LR  S+
Sbjct:  678 DVARKLLILAREAGYKLELSDIEVEPVLPPSFDASGDVDTFLARLPELDKEFARNVANAAEQGKVLRYVGLID----EGRCKVRIEAVDGNDPLYKVKNGENALAFYSRYYQPLPLVLRGYGAGNDVTAAGVFADLLRTLSW 815          
BLAST of CF835193 vs. ExPASy Swiss-Prot
Match: AKH_HAEIN (Bifunctional aspartokinase/homoserine dehydrogenase OS=Haemophilus influenzae GN=thrA PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.973e-24
Identity = 61/136 (44.85%), Postives = 89/136 (65.44%), Query Frame = -1
Query:  237 DVARKVIILARESGLKLELSDLPVRSLVPEPLKACASAEEFMKQLPQFDEELAKQRQEAEDAGEVLRYVGVVDAINKEGRVELRRYKKDHPFAQLSGSDNIIAFTTKRYKEQPLIVRGPGAGAQVTAGGIFSDILR 644
            DVARK++ILARE+G++LELSD+ V  ++P+      SA+EFM  LPQ DEE   +   A+  G+VLRYVG +     + +V +     ++P  ++   +N +AF T+ Y+  PL++RG GAG  VTA GIF+DILR
Sbjct:  678 DVARKLLILAREAGIELELSDVEVEGVLPKGFSDGKSADEFMAMLPQLDEEFKTRVATAKAEGKVLRYVGKIS--EGKCKVSIVAVDLNNPLYKVKDGENALAFYTRYYQPIPLLLRGYGAGNAVTAAGIFADILR 811          
The following BLAST results are available for this feature:
BLAST of CF835193 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
AKH1_ARATH2.084e-6686.30Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_ARATH5.133e-6582.88Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH2_MAIZE4.805e-6378.77Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH1_MAIZE4.067e-6279.45Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_DAUCA2.019e-6178.77Bifunctional aspartokinase/homoserine dehydrogenas... [more]
DHOM_SCHPO1.009e-3653.47Probable homoserine dehydrogenase OS=Schizosacchar... [more]
DHOM_YEAST9.146e-3044.37Homoserine dehydrogenase OS=Saccharomyces cerevisi... [more]
DHOM_EMENI4.539e-2947.95Homoserine dehydrogenase OS=Emericella nidulans GN... [more]
AK1H_SERMA1.046e-2542.96Bifunctional aspartokinase/homoserine dehydrogenas... [more]
AKH_HAEIN1.973e-2444.85Bifunctional aspartokinase/homoserine dehydrogenas... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06N06_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835193 ID=CF835193; Name=CF835193; organism=Citrus sinensis; type=EST; length=647bp
GCCGAACTAAACATATACTTATTTATACTTTCAAGCTACTAGATAAACTT
TATTTTGAAAGTTCGTAAGTTCCAAGACGACTAAGATACGTAATTACTAA
CTCAAAACACTATCATCATCCAGCAGATAAAACTACCAATGCTACTGCCT
CAAATAACCAAAAAGAGAAGGCTAAAACCAGTCTGAAAGGCATAGAAATT
GATACACTATGATGGGGCACCAAGATATGAGGCCAGCCGCAATATATCGC
TGAAGATACCACCTGCTGTGACTTGAGCTCCGGCACCAGGTCCACGGACG
ATAAGTGGCTGCTCCTTGTATCGTTTTGTTGTGAAAGCTATGATGTTATC
AGAACCAGAGAGCTGTGCAAATGGATGATCTTTCTTGTATCTTCGCAACT
CTACACGCCCCTCTTTGTTGATAGCATCCACCACTCCCACATATCTAAGG
ACTTCCCCTGCATCCTCGGCCTCTTGTCTTTGCTTGGCCAATTCTTCGTC
AAATTGTGGTAATTGCTTCATAAACTCTTCAGCAGATGCACAAGCTTTTA
ATGGTTCTGGCACAAGACTTCGAACAGGGAGATCAGAAAGTTCCAGCTTA
AGACCGGATTCTCGGGCAAGAATTATCACCTTTCTGGCAACATCTGT
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