CF835209

Overview
NameCF835209
Unique NameCF835209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13417 contig Csv1_Contig13417:303..997. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835209 vs. ExPASy Swiss-Prot
Match: NEP1_NEPGR (Aspartic proteinase nepenthesin-1 OS=Nepenthes gracilis GN=nep1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.720e-19
Identity = 66/208 (31.73%), Postives = 99/208 (47.60%), Query Frame = 3
Query:  105 FSYCLPSFKALSFSGSLRLGPI------GQPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAG-TIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGFDTCYSVP-----IVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSKLGVARELC 692
            FSYC+    + S   +L LG +      G P     T L+++ +  + YY+ L  + VG   + I P A   N   G G  IIDSGT  T  V  AY +VR  F  ++   +   S  GFD C+  P     +  PT  + F G ++ LP +N  I S +  + CLAM ++       +++  N+QQQN  ++YD  NS +  A   C
Sbjct:  237 FSYCMTPIGS-STPSNLLLGSLANSVTAGSPN----TTLIQSSQIPTFYYITLNGLSVGSTRLPIDPSAFALNSNNGTGGIIIDSGTTLTYFVNNAYQSVRQEFISQINLPVVNGSSSGFDLCFQTPSDPSNLQIPTFVMHFDGGDLELPSENYFI-SPSNGLICLAMGSSSQG----MSIFGNIQQQNMLVVYDTGNSVVSFASAQC 434          
BLAST of CF835209 vs. ExPASy Swiss-Prot
Match: NEP2_NEPGR (Aspartic proteinase nepenthesin-2 OS=Nepenthes gracilis GN=nep2 PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.411e-18
Identity = 65/203 (32.02%), Postives = 95/203 (46.80%), Query Frame = 3
Query:  105 FSYCLPSFKALSFSGSLRLGPI--GQPKRIKYTPLLKNPRRSSLYYVNLLAIRVGRRVVDIPPGALQFNPTTGAGTIIDSGTVFTRLVAPAYTAVRDVFRRRVGSNLTVTSLGGFDTCYSVP-----IVAPTITLMFSGMNVTLPQDNLLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRILYDVPNSKLGVARELC 692
            FSYC+ S+ + S S +L LG    G P+    T L+ +    + YY+ L  I VG   + IP    Q       G IIDSGT  T L   AY AV   F  ++       S  G  TC+  P     +  P I++ F G  + L + N+LI S A  + CLAM ++       +++  N+QQQ  ++LYD+ N  +      C
Sbjct:  238 FSYCMTSYGSSSPS-TLALGSAASGVPEGSPSTTLIHSSLNPTYYYITLQGITVGGDNLGIPSSTFQLQDDGTGGMIIDSGTTLTYLPQDAYNAVAQAFTDQINLPTVDESSSGLSTCFQQPSDGSTVQVPEISMQFDGGVLNLGEQNILI-SPAEGVICLAMGSSS---QLGISIFGNIQQQETQVLYDLQNLAVSFVPTQC 435          
The following BLAST results are available for this feature:
BLAST of CF835209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
NEP1_NEPGR3.720e-1931.73Aspartic proteinase nepenthesin-1 OS=Nepenthes gra... [more]
NEP2_NEPGR2.411e-1832.02Aspartic proteinase nepenthesin-2 OS=Nepenthes gra... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06N14_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835209 ID=CF835209; Name=CF835209; organism=Citrus sinensis; type=EST; length=695bp
AGTAAAAGGCCACGGGCAACTCGGTGCCGCCCCAAGGCCTCTTGGGCCTG
GGTCGTGGCTCATTATCCCTTTTGGCACAAACACAGAACCTCTATCAGTC
CACTTTTTCTTACTGTTTGCCCAGCTTCAAGGCACTTAGCTTTTCTGGGT
CATTAAGATTAGGACCCATTGGTCAGCCCAAGCGGATTAAGTATACACCA
TTGCTTAAAAACCCAAGAAGATCATCACTTTACTATGTTAATTTGTTGGC
CATTAGGGTTGGCAGAAGAGTTGTTGATATCCCACCTGGTGCCTTACAGT
TCAATCCCACAACCGGCGCTGGCACTATTATTGATTCTGGCACAGTTTTT
ACCAGACTGGTGGCGCCAGCTTACACCGCAGTGAGAGACGTGTTCCGTAG
ACGTGTAGGGAGTAACTTAACAGTGACATCCCTAGGCGGATTCGACACGT
GCTACTCGGTCCCAATCGTTGCGCCGACAATCACGTTGATGTTCTCAGGC
ATGAACGTGACTCTACCACAAGACAACCTTCTAATCCACAGCACTGCAGG
GAGCATCACATGCTTGGCCATGGCTGCAGCTCCAGACAACGTCAACTCAG
TGCTTAATGTCATTGCCAATATGCAGCAACAAAACCACAGAATCCTCTAT
GATGTGCCCAATTCAAAGCTCGGTGTCGCCCGTGAGCTTTGCACT
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