CF835267
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH_POPJC (Thioredoxin H-type OS=Populus jackii PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 2.864e-56 Identity = 99/139 (71.22%), Postives = 119/139 (85.61%), Query Frame = 2 Query: 56 MGTCLSKRQHDEEDGEHPVEFAGGNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAVDSVVPSQK 472 MG CL+KR HD +D E +E AGGNV L+TTK+ WDQK+SEAS++GKIV+ANFSA WCGPC+ IAP++ ELSE YPSLMFL++DVDEL +FS SW+IKATPTFFFL+DGQQVDKLVGANKPEL KK+ A +DS+ PS K Sbjct: 1 MGLCLAKRNHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGPCKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANKPELHKKITAILDSLPPSDK 139
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH9_ARATH (Thioredoxin H-type 9 OS=Arabidopsis thaliana GN=TRX9 PE=1 SV=1) HSP 1 Score: 207.223 bits (526), Expect = 6.602e-53 Identity = 97/137 (70.80%), Postives = 119/137 (86.86%), Query Frame = 2 Query: 56 MGTCLSKRQHDEEDGEHPVEFAGGNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAVDSVVPS 466 MG+C+SK + D+ D H VEF+GGNV L+TTK+ WD K++EA ++GKIV+ANFSATWCGPC+++APFF ELSEK+ SLMFLLVDVDEL +FS+SWDIKATPTFFFLK+GQQ+ KLVGANKPELQKKV + +DSV S Sbjct: 1 MGSCVSKGKGDD-DSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGPCKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANKPELQKKVTSIIDSVPES 136
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH_PICMA (Thioredoxin H-type OS=Picea mariana GN=SB09 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 9.600e-28 Identity = 56/108 (51.85%), Postives = 77/108 (71.30%), Query Frame = 2 Query: 119 AGGNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAA 442 A GNV + + W K+ EA ++V +F+ATWCGPCR+I P F ELS+K+P + FL VDVDEL + + WD++A PTF F+KDG+ VDK+VGA K +L++KVAA Sbjct: 2 AEGNVFACHSTEGWRSKLQEAIDTKRLVAVDFTATWCGPCRVIGPVFVELSKKFPEIFFLKVDVDELRDVAQEWDVEAMPTFIFIKDGKAVDKVVGAKKDDLERKVAA 109
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH2_TOBAC (Thioredoxin H-type 2 OS=Nicotiana tabacum PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.174e-25 Identity = 51/110 (46.36%), Postives = 78/110 (70.91%), Query Frame = 2 Query: 125 GNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAVDS 454 G V V T D W++ + + + K+++ +F+A+WCGPC+ IA F++EL++K P++ FL VDVDEL +T W ++A PTF FLK+G+ VDK+VGA K ELQ+ +A + S Sbjct: 5 GQVIGVHTVDAWNEHLQKGIDDKKLIVVDFTASWCGPCKFIASFYAELAKKMPTVTFLKVDVDELKSVATDWAVEAMPTFMFLKEGKIVDKVVGAKKDELQQTIAKHISS 114
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSJ (Thioredoxin H-type OS=Oryza sativa subsp. japonica GN=TRXH PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 2 Query: 125 GNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAVDSVVPS 466 G V KD +D +M++A + GK+VI +F+A+WCGPCR IAP F+E ++K+P +FL VDVDEL E + ++++A PTF F+KDG + DK+VGA K +LQ + V + S Sbjct: 6 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAAS 119
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH_ORYSI (Thioredoxin H-type OS=Oryza sativa subsp. indica GN=TRXH PE=1 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.533e-25 Identity = 53/114 (46.49%), Postives = 78/114 (68.42%), Query Frame = 2 Query: 125 GNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVAAAVDSVVPS 466 G V KD +D +M++A + GK+VI +F+A+WCGPCR IAP F+E ++K+P +FL VDVDEL E + ++++A PTF F+KDG + DK+VGA K +LQ + V + S Sbjct: 6 GVVIACHNKDEFDAQMTKAKEAGKVVIIDFTASWCGPCRFIAPVFAEYAKKFPGAVFLKVDVDELKEVAEKYNVEAMPTFLFIKDGAEADKVVGARKDDLQNTIVKHVGATAAS 119
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH1_ARATH (Thioredoxin H-type 1 OS=Arabidopsis thaliana GN=TRX1 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.614e-25 Identity = 49/105 (46.67%), Postives = 77/105 (73.33%), Query Frame = 2 Query: 125 GNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVA 439 G V T + W++++ +A++ +V+ +F+A+WCGPCR IAPFF++L++K P+++FL VD DEL ++ W I+A PTF FLK+G+ +DK+VGA K ELQ +A Sbjct: 6 GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKVDTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQSTIA 110
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.120e-23 Identity = 46/105 (43.81%), Postives = 74/105 (70.48%), Query Frame = 2 Query: 125 GNVSLVTTKDIWDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVA 439 G V T + W++++ + + +++ +F+A+WCGPCR IAPF +EL++K P++ FL VDVDEL + W +++ PTF FLK+G+ +DK+VGA K ELQ+ +A Sbjct: 6 GQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTASWCGPCRFIAPFLAELAKKLPNVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGAKKDELQQTIA 110
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH1_TOBAC (Thioredoxin H-type 1 OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.214e-22 Identity = 43/93 (46.24%), Postives = 68/93 (73.12%), Query Frame = 2 Query: 158 WDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKV 436 W++ + + K+V+ +F+A+WCGPCR IAP +++++K P ++FL VDVDEL S W ++A PTF F+KDG++VD++VGA K ELQ+ + Sbjct: 23 WNEYFKKGVETKKLVVVDFTASWCGPCRFIAPILADIAKKMPHVIFLKVDVDELKTVSAEWSVEAMPTFVFIKDGKEVDRVVGAKKEELQQTI 115
BLAST of CF835267 vs. ExPASy Swiss-Prot
Match: TRXH_FAGES (Thioredoxin H-type OS=Fagopyrum esculentum PE=3 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.586e-22 Identity = 42/94 (44.68%), Postives = 70/94 (74.47%), Query Frame = 2 Query: 158 WDQKMSEASKEGKIVIANFSATWCGPCRMIAPFFSELSEKYPSLMFLLVDVDELVEFSTSWDIKATPTFFFLKDGQQVDKLVGANKPELQKKVA 439 W++K +A GK+++ +F+A+WCGPCR+I P+ SEL++K+P + F VDVD+L + + + ++A P+F LK+GQ+V+++VGA K EL K+A Sbjct: 16 WNEKFQKAKDSGKLIVIDFTASWCGPCRVITPYVSELAKKFPHVAFFKVDVDDLKDVAEEYKVEAMPSFVILKEGQEVERIVGARKDELLHKIA 109 The following BLAST results are available for this feature:
BLAST of CF835267 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 78
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835267 ID=CF835267; Name=CF835267; organism=Citrus sinensis; type=EST; length=689bpback to top |