CF835273

Overview
NameCF835273
Unique NameCF835273
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length577
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835273 vs. ExPASy Swiss-Prot
Match: WBS22_MOUSE (Uncharacterized methyltransferase WBSCR22 OS=Mus musculus GN=Wbscr22 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34
Identity = 86/192 (44.79%), Postives = 107/192 (55.73%), Query Frame = -2
Query:    1 HQWMGLDISQSMLNIALEREVEXXXXXXXXXXXXXLRPGVVDGAISISAVQWLCNAAPPSHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRKKQKITNRGKGREWVXRR 576
            H W+G+DIS +ML+ AL+R+ E              RPG  DG ISISAVQWLCNA   S  P  RL  FF SLY  L RGARAV Q+YPE+  Q ELI   A RAGF GGVVVD+P+S+K++K +L L  GP   S+  PKG                  + ++  S+R  P KK +     K REWV  +
Sbjct:   76 HYWVGIDISPAMLDAALDRDTEGDLLLGDMGQGVPFRPGSFDGCISISAVQWLCNANKKSDVPARRLYCFFSSLYSALVRGARAVLQLYPENSEQLELITTQATRAGFTGGVVVDFPNSAKAKKFYLCLFSGP---STSLPKG--------LTESQDADQASESMFTSER-APHKKARRDLVKKSREWVLEK 255          
BLAST of CF835273 vs. ExPASy Swiss-Prot
Match: WBS22_DICDI (Probable methyltransferase WBSCR22 homolog OS=Dictyostelium discoideum GN=DDB_G0269722 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 2.833e-34
Identity = 82/195 (42.05%), Postives = 113/195 (57.95%), Query Frame = -2
Query:    1 HQWMGLDISQSMLNIALEREVEXXXXXXXXXXXXXLRPGVVDGAISISAVQWLCNAAPPSHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKGKVGXXXXXXXXXXXXXXENRTVCISDRHRPRK---KQKITNRGKGREWVXRR 576
            H W+G DISQ ML++A++REVE              R G  D AISISA+QWLCNA    H PR RL  FF SL+  L RG +A+ Q YPE+ AQ E+I  +A+R GF+GG+++D+P+SSK++K FLVL  G  +I   A KG  G              ++  V  S+R R R+   K K + + K +EW+  +
Sbjct:   73 HYWIGCDISQHMLDVAIDREVEGDVMLRDIGQGFPFRAGSFDAAISISAIQWLCNAEKSHHNPRKRLHTFFQSLFNVLTRGGKAILQFYPENSAQIEMITASALRCGFSGGLLIDFPNSSKAKKYFLVLFTGNNNIMPSA-KGVEG-----EEYEQQEEEDSNEVKYSNRKRDRRRVTKSKGSAQHKTKEWIMNK 261          
BLAST of CF835273 vs. ExPASy Swiss-Prot
Match: WBS22_HUMAN (Uncharacterized methyltransferase WBSCR22 OS=Homo sapiens GN=WBSCR22 PE=1 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.031e-32
Identity = 70/139 (50.36%), Postives = 90/139 (64.75%), Query Frame = -2
Query:  160 HQWMGLDISQSMLNIALEREVEXXXXXXXXXXXXXLRPGVVDGAISISAVQWLCNAAPPSHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSE 576
            H W+GLDIS +ML+ A++RE+E              +PG  DG ISISAVQWLCNA   S  P  RL  FF SL+  L RG+RAV Q+YPE+  Q ELI   A +AGF+GG+VVDYP+S+K++K +L L  GP +   E
Sbjct:   76 HYWVGLDISPAMLDEAVDREIEGDLLLGDMGQGIPFKPGTFDGCISISAVQWLCNANKKSENPAKRLYCFFASLFSVLVRGSRAVLQLYPENSEQLELITTQATKAGFSGGMVVDYPNSAKAKKFYLCLFSGPSTFIPE 214          
BLAST of CF835273 vs. ExPASy Swiss-Prot
Match: WBS22_BOVIN (Uncharacterized methyltransferase WBSCR22 OS=Bos taurus GN=WBSCR22 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 7.716e-32
Identity = 73/143 (51.05%), Postives = 89/143 (62.24%), Query Frame = -2
Query:  148 HQWMGLDISQSMLNIALEREVEXXXXXXXXXXXXXLRPGVVDGAISISAVQWLCNAAPPSHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSEAPKG 576
            H W+G+DIS +ML+ AL+RE +              +PG  D  ISISAVQWLCNA   S  P  RL  FF SLY  L RG RAV Q+YPE+  Q ELI   A RAGF GGVVVDYP+S+K++K +L L  GP   S+  P+G
Sbjct:   76 HYWVGIDISPAMLDEALDRETQGDVILGDMGQGIPFKPGTFDACISISAVQWLCNANKKSDIPAKRLYCFFSSLYSVLVRGGRAVLQLYPENSEQLELITTQATRAGFTGGVVVDYPNSAKAKKFYLCLFSGP---STSLPEG 215          
BLAST of CF835273 vs. ExPASy Swiss-Prot
Match: YAU6_SCHPO (Putative methyltransferase C26A3.06 OS=Schizosaccharomyces pombe GN=SPAC26A3.06 PE=2 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 7.474e-27
Identity = 62/133 (46.62%), Postives = 84/133 (63.16%), Query Frame = -2
Query:  181 HQWMGLDISQSMLNIALE-REVEXXXXXXXXXXXXXLRPGVVDGAISISAVQWLCNAAPPSHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCG 576
            H  +G+DIS SML++ALE +E+E              RPG  DG ISISA+QWL NA    + P+ RL  FF +LY  + RG RAV Q YPE+   +++I+  A +AGFAGG+VVD+P S + +K +LVL  G
Sbjct:   70 HVVVGMDISPSMLSVALESQEIEGDLLLCDMGTGVPFRPGTFDGVISISAIQWLLNADKTCNVPQRRLNRFFQTLYISMKRGGRAVMQYYPETEKSQQMIMDTARKAGFAGGIVVDHPESKRQKKYYLVLQAG 202          
BLAST of CF835273 vs. ExPASy Swiss-Prot
Match: BUD23_YEAST (Putative methyltransferase BUD23 OS=Saccharomyces cerevisiae GN=BUD23 PE=1 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 2.840e-26
Identity = 64/139 (46.04%), Postives = 82/139 (58.99%), Query Frame = -2
Query:  160 HQWMGLDISQSMLNIALEREVEXXXXXXXXXXXXXLRPGVVDGAISISAVQWLCNAAPPSHEPRLRLKAFFGSLYRCLARGARAVFQIYPESVAQRELILGAAMRAGFAGGVVVDYPHSSKSRKEFLVLTCGPPSISSE 576
            H W GLDIS SML   L RE+E              R G  D AISISA+QWLCNA    ++P+ RL  FF +LY  L +G + V Q YP++  Q + IL +A  AGF+GG+VVD P S K++K +LVL+ G P    E
Sbjct:   71 HVWCGLDISPSMLATGLSRELEGDLMLQDMGTGIPFRAGSFDAAISISAIQWLCNADTSYNDPKQRLMRFFNTLYAALKKGGKFVAQFYPKNDDQVDDILQSAKVAGFSGGLVVDDPESKKNKKYYLVLSSGAPPQGEE 209          
The following BLAST results are available for this feature:
BLAST of CF835273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
WBS22_MOUSE2.833e-3444.79Uncharacterized methyltransferase WBSCR22 OS=Mus m... [more]
WBS22_DICDI2.833e-3442.05Probable methyltransferase WBSCR22 homolog OS=Dict... [more]
WBS22_HUMAN2.031e-3250.36Uncharacterized methyltransferase WBSCR22 OS=Homo ... [more]
WBS22_BOVIN7.716e-3251.05Uncharacterized methyltransferase WBSCR22 OS=Bos t... [more]
YAU6_SCHPO7.474e-2746.62Putative methyltransferase C26A3.06 OS=Schizosacch... [more]
BUD23_YEAST2.840e-2646.04Putative methyltransferase BUD23 OS=Saccharomyces ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06P06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835273 ID=CF835273; Name=CF835273; organism=Citrus sinensis; type=EST; length=577bp
TCTTCTTCNCACCCACTCTCTACCTTTCCCCCTGTTTGTTATTTTCTGCT
TTTTCCTGGGTCTGTGCCTGTCTGAAATGCATACCGTTCGATTTTCTTCA
TCCCCACTACTTTCATCATCAGAGCAACTCTCCATGTCTCCAACTTTTCC
CTTTGGAGCCTCTGAGCTTATGGATGGTGGACCACATGTGAGGACTAGAA
ATTCTTTTCTACTTTTGGAACTATGTGGGTAGTCAACAACAACACCACCA
GCAAAACCAGCTCGCATAGCAGCACCCAATATCAACTCACGCTGGGCTAC
ACTTTCAGGATATATCTGAAATACTGCTCTTGCTCCCCTCGCCAAGCATC
TATATAATGACCCAAAGAAAGCCTTCAATCTTAATCGTGGCTCATGTGAG
GGCGGGGCAGCATTACATAACCACTGAACAGCCGATATACTGATGGCCCC
GTCAACAACTCCAGGCCGAAGTCCCAAGCCCTGACCCATGTCTCCAAGTA
ATAGATCGCCCTCAACCTCTCGCTCCAAAGCAATATTAAGCATTGACTGG
GAAATGTCTAGACCCATCCATTGGTGC
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