CF972317

Overview
NameCF972317
Unique NameCF972317
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length203
Libraries
Library NameType
sweet orange flesh cDNAcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6861 contig Csv1_Contig6861:429..631. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_PYRCO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Pyrus communis GN=DFR PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.265e-26
Identity = 50/67 (74.63%), Postives = 64/67 (95.52%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PTING++ I++AC+ AKTVR+LVFTSSAGT++VEEH+KPVYDE++WSD++F RSVKMTGWMY
Sbjct:   97 NEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMY 163          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_MALDO (Bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase OS=Malus domestica GN=DFR PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.265e-26
Identity = 50/67 (74.63%), Postives = 64/67 (95.52%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PTING++ I++AC+ AKTVR+LVFTSSAGT++VEEH+KPVYDE++WSD++F RSVKMTGWMY
Sbjct:   97 NEVIKPTINGLLDILKACQKAKTVRKLVFTSSAGTVNVEEHQKPVYDESNWSDVEFCRSVKMTGWMY 163          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_MAIZE (Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.559e-24
Identity = 49/67 (73.13%), Postives = 60/67 (89.55%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PT+ GM+SIMRACK A TVRR+VFTSSAGT+++EE ++PVYDE SW+D+DF R VKMTGWMY
Sbjct:  102 NEVIKPTVEGMISIMRACKEAGTVRRIVFTSSAGTVNLEERQRPVYDEESWTDVDFCRRVKMTGWMY 168          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_ARATH (Dihydroflavonol-4-reductase OS=Arabidopsis thaliana GN=DFRA PE=2 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 4.535e-24
Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PT+NGM+ IM+AC  AKTVRR VFTSSAGT++VEEH+K VYDE  WSDL+F+ S KMTGWMY
Sbjct:   97 NEVIKPTVNGMLGIMKACVKAKTVRRFVFTSSAGTVNVEEHQKNVYDENDWSDLEFIMSKKMTGWMY 163          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_SOLLC (Dihydroflavonol-4-reductase OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.489e-22
Identity = 47/67 (70.15%), Postives = 57/67 (85.07%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PT+ GM+SI+ +C  A TV+RLVFTSSAGTLDV+E +K  YDETSWSDLDF+ + KMTGWMY
Sbjct:  109 NEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEDQKLFYDETSWSDLDFIYAKKMTGWMY 175          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_HORVU (Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=ANT18 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 2.489e-22
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PT+ GM+SIMRACK A TV+R+VFTSSAG++++EE  +P YD+ +WSD+D+ R VKMTGWMY
Sbjct:   97 NEVIKPTVEGMLSIMRACKEAGTVKRIVFTSSAGSVNIEERPRPAYDQDNWSDIDYCRRVKMTGWMY 163          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_VITVI (Dihydroflavonol-4-reductase OS=Vitis vinifera GN=DFR PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.250e-22
Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PTI GM+ IM++C  AKTVRRLVFTSSAGT++++EH+ PVYDE+ WSD++F R+ KMT WMY
Sbjct:   97 NEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMY 163          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_PETHY (Dihydroflavonol-4-reductase OS=Petunia hybrida GN=DFRA PE=2 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 4.245e-22
Identity = 46/67 (68.66%), Postives = 57/67 (85.07%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PT+ GM+SI+ +C  A TV+RLVFTSSAGTLDV+E +K  YD+TSWSDLDF+ + KMTGWMY
Sbjct:  107 NEVIKPTVRGMLSIIESCAKANTVKRLVFTSSAGTLDVQEQQKLFYDQTSWSDLDFIYAKKMTGWMY 173          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_ANTMA (Dihydroflavonol-4-reductase OS=Antirrhinum majus GN=DFRA PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.235e-21
Identity = 43/67 (64.18%), Postives = 59/67 (88.06%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NEVI+PTI+GM++I+++C  AKTV++ +FT+S GT++VEEH+KPVYDET  SD+DF+ S KMTGWMY
Sbjct:  109 NEVIKPTIDGMLNIIKSCVQAKTVKKFIFTTSGGTVNVEEHQKPVYDETDSSDMDFINSKKMTGWMY 175          
BLAST of CF972317 vs. ExPASy Swiss-Prot
Match: DFRA_MEDSA (Dihydroflavonol-4-reductase (Fragment) OS=Medicago sativa GN=DFR1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.107e-21
Identity = 44/67 (65.67%), Postives = 58/67 (86.57%), Query Frame = 1
Query:    1 NEVIRPTINGMVSIMRACKNAKTVRRLVFTSSAGTLDVEEHRKPVYDETSWSDLDFVRSVKMTGWMY 201
            NE+I+PTI G++ IM+AC  AKTVRRL++TSSAGTL+V E +KP++DE+ WSD++F R VKMTGWMY
Sbjct:   80 NEMIKPTIKGVLDIMKACLKAKTVRRLIYTSSAGTLNVTEDQKPLWDESCWSDVEFCRRVKMTGWMY 146          
The following BLAST results are available for this feature:
BLAST of CF972317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
DFRA_PYRCO8.265e-2674.63Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MALDO8.265e-2674.63Bifunctional dihydroflavonol 4-reductase/flavanone... [more]
DFRA_MAIZE1.559e-2473.13Dihydroflavonol-4-reductase OS=Zea mays GN=A1 PE=3... [more]
DFRA_ARATH4.535e-2473.13Dihydroflavonol-4-reductase OS=Arabidopsis thalian... [more]
DFRA_SOLLC2.489e-2270.15Dihydroflavonol-4-reductase OS=Solanum lycopersicu... [more]
DFRA_HORVU2.489e-2265.67Dihydroflavonol-4-reductase OS=Hordeum vulgare GN=... [more]
DFRA_VITVI3.250e-2267.16Dihydroflavonol-4-reductase OS=Vitis vinifera GN=D... [more]
DFRA_PETHY4.245e-2268.66Dihydroflavonol-4-reductase OS=Petunia hybrida GN=... [more]
DFRA_ANTMA1.235e-2164.18Dihydroflavonol-4-reductase OS=Antirrhinum majus G... [more]
DFRA_MEDSA2.107e-2165.67Dihydroflavonol-4-reductase (Fragment) OS=Medicago... [more]

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Properties
Property NameValue
Genbank descriptionDFR-partial sweet orange flesh cDNA Citrus sinensis cDNA similar to partial dihydroflavonol-4-reductase, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF972317 ID=CF972317; Name=CF972317; organism=Citrus sinensis; type=EST; length=203bp
AATGAAGTGATAAGGCCGACAATAAATGGGATGGTAAGCATCATGAGAGC
GTGTAAAAATGCGAAGACTGTGAGGAGGTTAGTGTTCACATCATCAGCGG
GAACTTTGGATGTTGAGGAGCACCGAAAGCCAGTTTATGATGAAACCTCC
TGGAGTGACTTGGATTTTGTTCGGTCTGTTAAGATGACTGGATGGATGTA
TTT
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