CK932591

Overview
NameCK932591
Unique NameCK932591
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length605
Libraries
Library NameType
Developing fruit juice sac at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CK932591 vs. ExPASy Swiss-Prot
Match: UFC1_DICDI (Probable Ufm1-conjugating enzyme 1 OS=Dictyostelium discoideum GN=ufc1 PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.134e-50
Identity = 87/127 (68.50%), Postives = 105/127 (82.68%), Query Frame = 2 
Query:   56 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCRYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKN 436
            D +TK T+ QIPLL+ KAGPRDG  W  RLKEEY+ALI Y ++NK  DNDWF I + NP GTRW GKC Y++N  KYEFDL+FD+PVTYP TAPE+ +P+LDGKT+KMYRGGKICLT+HFKPLW++N
Sbjct:    2 DNHTKQTVQQIPLLTVKAGPRDGDKWIDRLKEEYQALIKYVEINKKADNDWFNIES-NPLGTRWQGKCWYIYNFKKYEFDLEFDMPVTYPETAPEIAIPELDGKTEKMYRGGKICLTIHFKPLWSRN 127
[Close]
BLAST of CK932591 vs. ExPASy Swiss-Prot
Match: UFC1_HUMAN (Ufm1-conjugating enzyme 1 OS=Homo sapiens GN=UFC1 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 1.720e-48
Identity = 84/127 (66.14%), Postives = 104/127 (81.89%), Query Frame = 2 
Query:   56 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCRYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKN 436
            D  T+  +++IP+L T AGPRD   W QRLKEEY++LI Y + NK+ DNDWFR+ + N EGTRW GKC Y+H+LLKYEFD++FDIP+TYP TAPE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N
Sbjct:    3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARN 128
[Close]
BLAST of CK932591 vs. ExPASy Swiss-Prot
Match: UFC1_BOVIN (Ufm1-conjugating enzyme 1 OS=Bos taurus GN=UFC1 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 1.720e-48
Identity = 84/127 (66.14%), Postives = 104/127 (81.89%), Query Frame = 2 
Query:   56 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCRYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKN 436
            D  T+  +++IP+L T AGPRD   W QRLKEEY++LI Y + NK+ DNDWFR+ + N EGTRW GKC Y+H+LLKYEFD++FDIP+TYP TAPE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N
Sbjct:    3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARN 128
[Close]
BLAST of CK932591 vs. ExPASy Swiss-Prot
Match: UFC1_MOUSE (Ufm1-conjugating enzyme 1 OS=Mus musculus GN=Ufc1 PE=2 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 6.534e-48
Identity = 82/127 (64.57%), Postives = 104/127 (81.89%), Query Frame = 2 
Query:   56 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCRYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKN 436
            D  T+  +++IP+L T AGPRD   W QRLKEEY++LI Y + NK++DNDWFR+ + N EGTRW GKC Y+H+ LKYEFD++F+IP+TYP TAPE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N
Sbjct:    3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNSDNDWFRLES-NKEGTRWFGKCWYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARN 128
[Close]
BLAST of CK932591 vs. ExPASy Swiss-Prot
Match: UFC1_RAT (Ufm1-conjugating enzyme 1 OS=Rattus norvegicus GN=Ufc1 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.456e-47
Identity = 82/127 (64.57%), Postives = 103/127 (81.10%), Query Frame = 2 
Query:   56 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCRYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKN 436
            D  T+  +++IP+L T AGPRD   W QRLKEEY++LI Y + NK+ DNDWFR+ + N EGTRW GKC Y+H+ LKYEFD++F+IP+TYP TAPE+ +P+LDGKT KMYRGGKICLT HFKPLWA+N
Sbjct:    3 DEATRRVVSEIPVLKTNAGPRDRELWVQRLKEEYQSLIRYVENNKNADNDWFRLES-NKEGTRWFGKCWYIHDFLKYEFDIEFEIPITYPTTAPEIAVPELDGKTAKMYRGGKICLTDHFKPLWARN 128
[Close]
BLAST of CK932591 vs. ExPASy Swiss-Prot
Match: UFC1_CAEEL (Probable Ufm1-conjugating enzyme OS=Caenorhabditis elegans GN=C40H1.6 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 2.102e-46
Identity = 83/127 (65.35%), Postives = 100/127 (78.74%), Query Frame = 2 
Query:   56 DPNTKSTLTQIPLLSTKAGPRDGAAWTQRLKEEYKALIAYTQMNKSNDNDWFRISAANPEGTRWTGKCRYVHNLLKYEFDLQFDIPVTYPATAPELELPQLDGKTQKMYRGGKICLTVHFKPLWAKN 436
            D  TKS+L  IPL  TKA PRDG  W +RLKEEY+A+IA  Q NK  D DWF++ + N  GT+W GKC Y HN++KYEFD++FDIP+TYP TAPE+ LP+LDGKT KMYRGGKICL+ HFKPLWA+N
Sbjct:    2 DDATKSSLKAIPLCKTKASPRDGDLWIERLKEEYEAIIAAVQNNKDCDRDWFQLES-NERGTKWFGKCWYFHNMVKYEFDVEFDIPITYPVTAPEIALPELDGKTAKMYRGGKICLSEHFKPLWARN 127
The following BLAST results are available for this feature:
BLAST of CK932591 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
UFC1_DICDI3.134e-5068.50Probable Ufm1-conjugating enzyme 1 OS=Dictyosteliu... [more]
UFC1_HUMAN1.720e-4866.14Ufm1-conjugating enzyme 1 OS=Homo sapiens GN=UFC1 ... [more]
UFC1_BOVIN1.720e-4866.14Ufm1-conjugating enzyme 1 OS=Bos taurus GN=UFC1 PE... [more]
UFC1_MOUSE6.534e-4864.57Ufm1-conjugating enzyme 1 OS=Mus musculus GN=Ufc1 ... [more]
UFC1_RAT1.456e-4764.57Ufm1-conjugating enzyme 1 OS=Rattus norvegicus GN=... [more]
UFC1_CAEEL2.102e-4665.35Probable Ufm1-conjugating enzyme OS=Caenorhabditis... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004531_H03 Developing fruit juice sac at 38 DAFB Citrus sinensis cDNA clone JSJune0002_IIIF_H03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK932591 ID=CK932591; Name=CK932591; organism=Citrus sinensis; type=EST; length=605bp
GGGGATTCACAATTGGCAAAATCTAGGGTTAGGGTTAGCAAAGATGGAGG
GATGGGACCCGAACACGAAATCGACGCTGACCCAGATCCCGCTTTTGTCA
ACGAAAGCCGGTCCCAGAGACGGTGCGGCGTGGACGCAGCGGCTTAAAGA
GGAGTACAAGGCTTTGATCGCCTATACACAGATGAATAAGTCCAACGACA
ACGATTGGTTTCGCATCTCAGCGGCCAATCCGGAGGGGACACGTTGGACA
GGCAAGTGCCGGTACGTTCACAACCTCTTAAAGTACGAATTCGATCTCCA
GTTTGATATTCCGGTTACGTACCCCGCCACGGCCCCCGAGCTTGAGCTCC
CCCAACTCGATGGCAAGACCCAGAAGATGTACAGAGGAGGGAAGATTTGC
TTGACCGTACATTTCAAGCCACTTTGGGCTAAAAACTGGTACTTTTGCTT
TACATTTGTTGATTATTTTGTGTATTTTCGGTTTTGATTGAGTTGACAAT
GGAATTTGTAATTTCTGTGATATGCTTTTGGCTGTTCAGAAATTTATCAA
ATGAAAAATGAAATTAAAATTTTCACAAAAAAAAAAAAAAAAAAAAAAAA
AAAAA
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