CK933948
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: SYP22_ARATH (Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 7.456e-82 Identity = 167/257 (64.98%), Postives = 191/257 (74.32%), Query Frame = 2 Query: 86 MSFQDLEAGRPVSSLRRNLVNGKQDSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 MSFQDLE+GR S+ + N G+QDSTQAVASGIFQINT VSTFQRLVNTLGTPKDTPELREK+HKTRLHIGQLVKDTSAKLK+ASETDH + V+ FQAVLKEFQKAQ+ AAERET YTPFVPQ+ LPSSYTA E+ D+ EQ A L ES+RQE+VLLD VNE+FKDLAVLV++QG +IDDIG+HI+NS+ AT+QGKSQLV+AAKTQ+SNSS CLL Sbjct: 1 MSFQDLESGRGRSTRKFN--GGRQDSTQAVASGIFQINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAERETTYTPFVPQSALPSSYTAGEV----DKVPEQRAQLQESKRQELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSRAATSQGKSQLVQAAKTQKSNSSLTCLL 251
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: SYP23_ARATH (Syntaxin-23 OS=Arabidopsis thaliana GN=SYP23 PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.967e-74 Identity = 152/245 (62.04%), Postives = 175/245 (71.43%), Query Frame = 2 Query: 86 MSFQDLEAGRPVSSLRRNLVNG---KQDSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVK 811 MSFQDLEAGR S +NG +QD+TQ VASGIFQINT+VSTF RLVNTLGTPKDTPELREK+HKTRL+IGQLVKDTSAKLK+ASETDH V+ FQAVLKEFQKAQRLAAERET Y P V + LPSSYT+ E+D++ D+ EQ ALLVES+RQE+VLLD V+E+FKDLAVLVH+QG +IDDIG+HI+NS ATAQGKS LV+ Sbjct: 1 MSFQDLEAGRGRSLASSRNINGGGSRQDTTQDVASGIFQINTSVSTFHRLVNTLGTPKDTPELREKLHKTRLYIGQLVKDTSAKLKEASETDHQRGVNQKKKIVDAKLAKDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDKHPEQRALLVESKRQELVLLDNEIAFNEAVIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGNMIDDIGTHIDNSYAATAQGKSHLVR 245
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: SYP21_ARATH (Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1) HSP 1 Score: 234.572 bits (597), Expect = 5.555e-61 Identity = 138/264 (52.27%), Postives = 169/264 (64.02%), Query Frame = 2 Query: 86 MSFQDLEAGRPVSSLRRNLVNGKQ-------DSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 MSFQDLEAG + R G+Q D +Q VA+GIF+I+TAV++F RLVN++GTPKDT ELR+K+ KTRL I +LVK+TSAKLK+ASE D H S FQ+VLKEFQKAQRLAAERE YTP V + + P+SY A ELD S R ++Q ALL++SRRQEVV LD VN +FKDLA++V+ QG I+DDI S+++NS AT Q QL KAAKTQRSNSS CLL Sbjct: 1 MSFQDLEAGTRSPAPNR-FTGGRQQRPSSRGDPSQEVAAGIFRISTAVNSFFRLVNSIGTPKDTLELRDKLQKTRLQISELVKNTSAKLKEASEADLHGSASQIKKIADAKLAKDFQSVLKEFQKAQRLAAEREITYTPVVTKEI-PTSYNAPELDTESLRISQQQALLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISSNLDNSHAATTQATVQLRKAAKTQRSNSSLTCLL 262
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.628e-36 Identity = 96/195 (49.23%), Postives = 115/195 (58.97%), Query Frame = 2 Query: 278 HKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSS--FDCLL 856 HK L IGQLVKDTSA L++ASETDH V+ F+A LKEFQKAQ + ERET+Y PF P+ S+++ E+DI DRS EQ +L+ESRRQE+VLLD V E+FKDLAV+V QGT IDDI I+N + A AQGKS LVKA+ TQ SNSS F C L Sbjct: 154 HKKMLLIGQLVKDTSANLREASETDHRRDVAQSKKIADAKLAKDFEAALKEFQKAQHITVERETSYIPFDPK----GSFSSSEVDIGYDRSQEQR-VLMESRRQEIVLLDNEISLNEARIEAREQGIQEVKHQISEVMEMFKDLAVMVDHQGT-IDDIDEKIDNLRSAAAQGKSHLVKASNTQGSNSSLLFSCSL 342
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: STX7_PONAB (Syntaxin-7 OS=Pongo abelii GN=STX7 PE=2 SV=3) HSP 1 Score: 99.3673 bits (246), Expect = 2.789e-20 Identity = 66/232 (28.45%), Postives = 105/232 (45.26%), Query Frame = 2 Query: 167 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 Q ++S I +I + QR +N LGTP+D+PELR+++ + + + QL K+T +K+ F L FQK QR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++EN++V Q QL +AA QR + C++ Sbjct: 16 QRISSNIQKITQCSAEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLTKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVGEFTTSLTNFQKVQRQAAEREKEFVARVRASSRVSG------SFPEDSSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRKTLCII 241
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: STX7_RAT (Syntaxin-7 OS=Rattus norvegicus GN=Stx7 PE=1 SV=4) HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20 Identity = 66/232 (28.45%), Postives = 105/232 (45.26%), Query Frame = 2 Query: 167 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 Q ++S I +I + QR +N LGTP+DTPELR+++ + + + QL K+T +K+ F L FQK QR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++E+++V Q QL +AA QR + C++ Sbjct: 16 QRISSNIQKITQCSAEIQRTLNQLGTPQDTPELRQQLQQEQQYTNQLAKETDKYIKEFGFLPTTPSEQRQRKIQKDRLVAEFTTALTNFQKVQRQAAEREKEFVARVRASSRVSG------GFPEDSSKEKNFVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEVHVQQANQQLSRAANYQRKSRKTLCII 241
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: STX7_HUMAN (Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4) HSP 1 Score: 98.2117 bits (243), Expect = 6.214e-20 Identity = 66/232 (28.45%), Postives = 104/232 (44.83%), Query Frame = 2 Query: 167 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 Q ++S I +I QR +N LGTP+D+PELR+++ + + + QL K+T +K+ F L FQK QR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++EN++V Q QL +AA QR + C++ Sbjct: 16 QRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREKEFVARVRASSRVSG------SFPEDSSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEVHVQQANQQLSRAADYQRKSRKTLCII 241
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: STX7_MOUSE (Syntaxin-7 OS=Mus musculus GN=Stx7 PE=1 SV=3) HSP 1 Score: 95.5153 bits (236), Expect = 4.028e-19 Identity = 66/232 (28.45%), Postives = 104/232 (44.83%), Query Frame = 2 Query: 167 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 Q ++S I +I QR +N LGTP+D+PELR+ + + + + QL K+T +K+ F L FQKAQR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++E+++V Q QL +AA QR + C++ Sbjct: 16 QRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQLLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKAQRQAAEREKEFVARVRASSRVSG------GFPEDSSKEKNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDMIDSIEANVESAEVHVQQANQQLSRAADYQRKSRKTLCII 241
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: STX7A_DICDI (Syntaxin-7A OS=Dictyostelium discoideum GN=syn7A PE=1 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.936e-13 Identity = 65/266 (24.44%), Postives = 112/266 (42.11%), Query Frame = 2 Query: 122 SSLRRNLVNGKQDST-----QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERE-TAYTPFVPQAVLPSSYTAHELDISSD-----------------RSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDC 850 +S N G D T Q+ I QI AV +LV LGTPKD+ + REKI L+ S K+K + ++ S F L++F+ ++A ++E T P P P+++ + +++ R E +L+ SRRQ++ ++ +NE+F DL+ LV EQG +I+ I + +E++ + T +G + L +A+K Q+S+ + C Sbjct: 69 NSFDNNGYGGDDDVTNNSDYQSTTRNIQQIQNAVQILTKLVQLLGTPKDSMDTREKIRNCVDSTTHLISSESGKVKNLTSLASRSRDSKNKLLYQKLVKE-FNNCLQQFKDIAQVATKKEKTTPLPVAPDHQQPTTFGRNNNSNNNNQNNHFLNNQQPYYDDDNREDEHQSLMESSRRQQLAQIEAEREYQNSIIQERDEGIRKIEQSIVEINEIFVDLSGLVAEQGVMINTIEASLESTTINTKEGVNHLREASKNQKSSRNKMC 333
BLAST of CK933948 vs. ExPASy Swiss-Prot
Match: STX12_HUMAN (Syntaxin-12 OS=Homo sapiens GN=STX12 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 9.609e-13 Identity = 60/237 (25.32%), Postives = 106/237 (44.73%), Query Frame = 2 Query: 167 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXX--FQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELD-----ISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQVATAQGKSQLVKAAKTQRSNSSFDCLL 856 Q + I +I+ A + + L++ LGT +D+ +L+E + + + QL K+T+ LK+ S F A L FQ QR +E+E + +A S +A E +S D E + + +S+ EV + + VN++FKDLA+++H+QG +ID I +++E+S+V + QL +AA Q+ + C+L Sbjct: 27 QTCSGNIQRISQATAQIKNLMSQLGTKQDSSKLQENLQQLQHSTNQLAKETNELLKELGSLPLPLSTSEQRQQRLQKERLMNDFSAALNNFQAVQRRVSEKEKES---IARARAGSRLSAEERQREEQLVSFDSHEEWNQM--QSQEDEVAITEQDLELIKERETAIRQLEADILD----VNQIFKDLAMMIHDQGDLIDSIEANVESSEVHVERATEQLQRAAYYQKKSRKKMCIL 254 The following BLAST results are available for this feature:
BLAST of CK933948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK933948 ID=CK933948; Name=CK933948; organism=Citrus sinensis; type=EST; length=856bpback to top |