CK933958
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana GN=At1g67750 PE=2 SV=2) HSP 1 Score: 424.861 bits (1091), Expect = 8.232e-120 Identity = 199/226 (88.05%), Postives = 212/226 (93.81%), Query Frame = 3 Query: 111 APTFISSSPVQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 +PTFI+S+PV +PELVV+EV++ INASRRNLG LSCGTGNPIDDCWRCDPKWE+NRQ+LADCAIGFGK AIGG+DGKIYVVTDS D D VNPKPGTLR+AVIQDEPLWIIFARDMVI LKEELIMNSFKTIDGRGASVHIAGG CIT+QYVTNIIIHG+NIHDCKR GNA VRDSPSHYGWRT SDGD VSIFGGSHVWVDHCSLSNC DGLIDAIHGSTAITISN Sbjct: 21 SPTFIASTPVSEPELVVQEVNEKINASRRNLGVLSCGTGNPIDDCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISN 246 HSP 2 Score: 27.7202 bits (60), Expect = 8.232e-120 Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY++HHNKVMLL Sbjct: 247 NYLSHHNKVMLL 258
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1) HSP 1 Score: 402.134 bits (1032), Expect = 1.866e-113 Identity = 187/223 (83.86%), Postives = 203/223 (91.03%), Query Frame = 3 Query: 126 SSSPVQDPELVVEEVHKSINAS--RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 SS PV DPELVVEEVH+ IN S RR LGF SCG+GNPIDDCWRCD WE+NR++LADC IGFGK AIGG+DG+IYVVTD G+DDPVNP+PGTLRYAVIQDEPLWIIF RDM I LKEELIMNSFKT+DGRGASVHI+GGPCITIQYVTNIIIHG++IHDCK+GGN VRDSP HYG+RT+SDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAI GSTAITISN Sbjct: 46 SSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISN 268 HSP 2 Score: 29.261 bits (64), Expect = 1.866e-113 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY+THHNKVMLL Sbjct: 269 NYLTHHNKVMLL 280
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2) HSP 1 Score: 404.831 bits (1039), Expect = 1.866e-113 Identity = 192/229 (83.84%), Postives = 209/229 (91.27%), Query Frame = 3 Query: 111 APTFISSSPVQDPELVVEEVHKSINAS---RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 AP F+SS PV DPE VVEEVHKSINAS RR LG+LSC TGNPIDDCWRCDP WE++RQ+LADCAIGFGK AIGG+DG+IYVVTDSG+D+PV+PKPGTLR+AV+QDEPLWIIF RDM I LKEELIMNSFKTIDGRGASVHI+GGPCITIQYVTNIIIHGI+IHDCK+GGNA VR SP H+GWRTISDGDGVSIFGGSHVWVDHCS SNC DGLIDAI GSTAIT+SN Sbjct: 19 APLFLSS-PVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSN 246 HSP 2 Score: 26.5646 bits (57), Expect = 1.866e-113 Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N+MTHH+KVMLL Sbjct: 247 NHMTHHDKVMLL 258
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL_ZINEL (Pectate lyase OS=Zinnia elegans PE=1 SV=1) HSP 1 Score: 372.859 bits (956), Expect = 1.915e-104 Identity = 169/221 (76.47%), Postives = 191/221 (86.43%), Query Frame = 3 Query: 126 SSSPVQDPELVVEEVHKSINASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 SSSP + P +V EVHKSINASRRNLG+LSCGTGNPIDDCWRCDP W NRQ+LADCAIGFGK A+GG++G+IYVVTD G+DDPVNP PGTLRYAVIQDEPLWIIF RDMVI L++EL+MNS KTIDGRG +VHI GPCITI Y +NIIIHGI+IHDCK+ GN N+R+SP H GW T SDGDG+SIF +W+DH SLSNC+DGLIDAIHGSTAITISN Sbjct: 19 SSSPSRTPHAIVNEVHKSINASRRNLGYLSCGTGNPIDDCWRCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISN 239 HSP 2 Score: 28.4906 bits (62), Expect = 1.915e-104 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NYMTHH+KVMLL Sbjct: 240 NYMTHHDKVMLL 251
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1) HSP 1 Score: 357.836 bits (917), Expect = 2.313e-99 Identity = 169/228 (74.12%), Postives = 197/228 (86.40%), Query Frame = 3 Query: 111 APTFISSSPVQDPELVVEEVHKSINAS--RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 AP + SS +QDPELVV++VH+SINAS RRNLG+LSCG+GNPID P+ + + CAIGFGK AIGGK+G+IYVVTDSG+DDPVNPKPGTLR+AVIQDEPLWIIF RDMVI LK+EL+MNS+KTIDGRGASVHI+GGPCITI + +NIIIHGINIHDCK+ GN N+RDSP+H GW +SDGDG+SIFGG ++WVDHCSLSNC+DGLIDAIHGSTAITISN Sbjct: 14 APLLVISS-IQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLLAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEPLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQSGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 240 HSP 2 Score: 26.5646 bits (57), Expect = 2.313e-99 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY THH+KVMLL Sbjct: 241 NYFTHHDKVMLL 252
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL14_ARATH (Putative pectate lyase 14 OS=Arabidopsis thaliana GN=At4g13210 PE=2 SV=1) HSP 1 Score: 350.132 bits (897), Expect = 1.783e-96 Identity = 164/220 (74.55%), Postives = 184/220 (83.64%), Query Frame = 3 Query: 138 VQDPELVVEEVHKSINAS--RRNLGFLS-CGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 V+DPE + V SI S RR LGF S C TGNPIDDCWRCD KW R++LADCAIGFG+ A+GG+DG+ Y+VTD D DPV PKPGTLRYAVIQDEPLWI+F RDMVITL +ELIMNSFKTIDGRG +VHIAGG C+T+QYVTNIIIHGINIHDCKR GNA VR S SHYGWRT++DGDG+SIFG SH+W+DH SLS+C DGLIDAI GSTAITISN Sbjct: 37 VKDPEEIAAMVDMSIRNSTYRRKLGFFSSCSTGNPIDDCWRCDKKWHRRRKRLADCAIGFGRNAVGGRDGRYYIVTDPSDHDPVTPKPGTLRYAVIQDEPLWIVFKRDMVITLSQELIMNSFKTIDGRGVNVHIAGGACLTVQYVTNIIIHGINIHDCKRTGNAMVRSSESHYGWRTMADGDGISIFGSSHIWIDHNSLSSCADGLIDAIMGSTAITISN 256 HSP 2 Score: 24.6386 bits (52), Expect = 1.783e-96 Identity = 8/12 (66.67%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY+THHN+ +LL Sbjct: 257 NYLTHHNEAILL 268
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL20_ARATH (Probable pectate lyase 20 OS=Arabidopsis thaliana GN=At5g48900 PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.147e-95 Identity = 160/219 (73.06%), Postives = 185/219 (84.47%), Query Frame = 3 Query: 138 VQDPELVVEEVHKSINAS--RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 V++PE V V SI S RR LG+ SC TGNPIDDCWRCD +W+ R+ LA+CAIGFG+ AIGG+DG+ YVV+D DD+PVNPKPGTLR+AVIQ+EPLWI+F RDMVITLKEELIMNSFKTIDGRG +VHIA G CITIQ+VTNIIIHGI+IHDC+ GNA VR SPSHYGWRT++DGDG+SIFG SH+W+DH SLSNC DGLIDA+ STAITISN Sbjct: 37 VENPEEVAAMVDMSIRNSTARRRLGYFSCSTGNPIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHAVIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIHIHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMASTAITISN 255 HSP 2 Score: 26.9498 bits (58), Expect = 1.147e-95 Identity = 10/12 (83.33%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NY THHN+VMLL Sbjct: 256 NYFTHHNEVMLL 267
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=2 SV=1) HSP 1 Score: 342.428 bits (877), Expect = 9.624e-95 Identity = 155/202 (76.73%), Postives = 172/202 (85.15%), Query Frame = 3 Query: 183 NASRRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 NASRR+L +LSC TGNPIDDCWRCDP WE NRQ+LADCAIGFGK AIGG+ G+IYVVTD +DDPVNP+PGTLRYAV Q+EPLWIIF RDMVI LK+ELI+ SFKTIDGRG+SVHI GPC+ I Y TNIIIHGINIHDCK G ++D P H GW SDGD V+IFGG HVW+DHCSLSNC+DGLIDAIHGSTAITISN Sbjct: 46 NASRRSLAYLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITISN 247 HSP 2 Score: 26.5646 bits (57), Expect = 9.624e-95 Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N+MTHH+KVMLL Sbjct: 248 NHMTHHDKVMLL 259
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL10_ARATH (Probable pectate lyase 10 OS=Arabidopsis thaliana GN=At3g24670 PE=2 SV=2) HSP 1 Score: 339.347 bits (869), Expect = 2.787e-94 Identity = 160/219 (73.06%), Postives = 180/219 (82.19%), Query Frame = 3 Query: 138 VQDPELVVEEVHKSINAS--RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 V++PE V V I S RR LGF SC TGNPIDDCWRCD W R++LA+CAIGFG+ AIGG+DG+ YVVTD D D VNP+PGTLR+AVIQD PLWI+F RDMVITL +ELIMNSFKTIDGRG +V IAGG CITIQYVTNIIIHGIN+HDC+R GNA VR SPSHYGWRT++DGD +SIFG SH+W+DH SLSNC DGLIDAI GSTAITISN Sbjct: 60 VKNPEEVAAMVDMKIKNSTERRRLGFFSCATGNPIDDCWRCDRNWHLRRKRLANCAIGFGRNAIGGRDGRYYVVTDPSDHDAVNPRPGTLRHAVIQDRPLWIVFKRDMVITLTQELIMNSFKTIDGRGVNVAIAGGACITIQYVTNIIIHGINVHDCRRTGNAMVRSSPSHYGWRTMADGDAISIFGSSHIWIDHNSLSNCADGLIDAIMGSTAITISN 278 HSP 2 Score: 28.1054 bits (61), Expect = 2.787e-94 Identity = 10/12 (83.33%), Postives = 12/12 (100.00%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 NYMTHHN+VML+ Sbjct: 279 NYMTHHNEVMLM 290
BLAST of CK933958 vs. ExPASy Swiss-Prot
Match: PEL8_ARATH (Probable pectate lyase 8 OS=Arabidopsis thaliana GN=At3g07010 PE=2 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 3.636e-94 Identity = 157/219 (71.69%), Postives = 185/219 (84.47%), Query Frame = 3 Query: 138 VQDPELVVEEVHKSINAS--RRNLGFLSCGTGNPIDDCWRCDPKWEENRQQLADCAIGFGKQAIGGKDGKIYVVTDSGDDDPVNPKPGTLRYAVIQDEPLWIIFARDMVITLKEELIMNSFKTIDGRGASVHIAGGPCITIQYVTNIIIHGINIHDCKRGGNANVRDSPSHYGWRTISDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIHGSTAITISN 788 V++P+ V V SI S RR LG+ SC TGNPIDDCWRCD KW+ R++LADC+IGFG+ AIGG+DG+ YVVTD GDDDPVNP PGTLR+AVIQDEPLWIIF RDMVITLK+ELIMNSFKTIDGRG +VHIA G C+TIQYVTNII+HGI++HDCK GNA VR SPSHYG+R+++DGD +SIFG SH+W+DH SLSNC DGL+DA+ STAIT+SN Sbjct: 36 VENPDEVAAMVDMSIRNSTERRRLGYFSCATGNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLRHAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHGIHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMSSTAITVSN 254 HSP 2 Score: 25.409 bits (54), Expect = 3.636e-94 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 1 Query: 790 NYMTHHNKVMLL 825 N+ THHN+VMLL Sbjct: 255 NFFTHHNEVMLL 266 The following BLAST results are available for this feature:
BLAST of CK933958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >CK933958 ID=CK933958; Name=CK933958; organism=Citrus sinensis; type=EST; length=827bpback to top |