CK933975

Overview
NameCK933975
Unique NameCK933975
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length491
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933975 vs. ExPASy Swiss-Prot
Match: UMP1_ARATH (Uncharacterized protein At3g15000, mitochondrial OS=Arabidopsis thaliana GN=At3g15000 PE=1 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 2.464e-29
Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 1
Query:  175 LLEGCXYKHWVVVMEAPKGYPPRDEIVNGYVKTLASALGCEEDGKKSIYSVSTKYYYAFGCKFPEHFAYKIRSLPNVKWVLPDSYLCHGESGYGG*PFADGEVVP 489
            LL+GC ++HW+VV+E P+G P RDEI++ Y+KTLA  +G E++ +  IYSVST+ YYAFG    E  ++K++ L NV+WVLPDSYL      YGG PF DG+ VP
Sbjct:   91 LLDGCDFEHWLVVVEPPQGEPTRDEIIDSYIKTLAQIVGSEDEARMKIYSVSTRCYYAFGALVSEDLSHKLKELSNVRWVLPDSYLDVRNKDYGGEPFIDGKAVP 195          
BLAST of CK933975 vs. ExPASy Swiss-Prot
Match: DAG_ANTMA (DAG protein, chloroplastic OS=Antirrhinum majus GN=DAG PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.891e-21
Identity = 46/106 (43.40%), Postives = 67/106 (63.21%), Query Frame = 1
Query:  175 LLEGCXYKHWVVVMEAPKG-YPPRDEIVNGYVKTLASALGCEEDGKKSIYSVSTKYYYAFGCKFPEHFAYKIRSLPNVKWVLPDSYLCHGESGYGG*PFADGEVVP 489
            +L GC Y HW++VME PK   P R+++++ Y+ TLA+ LG  E+ KK++Y+ ST  Y  F C   E  + K + LP V WVLPDSY+      YGG  + +GE++P
Sbjct:   80 MLPGCDYNHWLIVMEFPKDPAPTREQMIDTYLNTLATVLGSMEEAKKNMYAFSTTTYTGFQCTVTEETSEKFKGLPGVLWVLPDSYIDVKNKDYGGDKYVNGEIIP 185          
The following BLAST results are available for this feature:
BLAST of CK933975 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
UMP1_ARATH2.464e-2953.33Uncharacterized protein At3g15000, mitochondrial O... [more]
DAG_ANTMA1.891e-2143.40DAG protein, chloroplastic OS=Antirrhinum majus GN... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004542_H09 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933975 ID=CK933975; Name=CK933975; organism=Citrus sinensis; type=EST; length=491bp
GGGGAGAGCTTAACAATCAAAACGACGATGCTAAGAAACATCATCCTAAG
ATGCCCGTTAAATCTGACGGCGGCTATCTACCGCCGCCGTCACCTTCAGT
CATCATCTCCTCCGTCGAGTTTATTCTTCTTCTCTTCTGACTCGACGGTG
ACTCAGTTGACTCGACTACCGAGTTTGCTGGAGGGATGTGANTACAAGCA
CTGGGTCGTCGTTATGGAGGCTCCCAAAGGATACCCACCACGAGATGAGA
TCGTTAATGGCTACGTTAAGACTCTAGCTTCGGCTTTGGGCTGCGAAGAG
GATGGAAAGAAATCGATATATTCAGTTTCGACTAAATACTACTATGCATT
TGGTTGCAAATTTCCTGAACATTTTGCTTATAAGATCAGATCCTTACCAA
ATGTGAAATGGGTACTGCCGGATTCTTATTTGTGTCATGGTGAAAGTGGC
TATGGAGGATAGCCATTTGCTGATGGGGAGGTTGTTCCATA
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