CK933993

Overview
NameCK933993
Unique NameCK933993
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:1..864. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.171e-84
Identity = 162/239 (67.78%), Postives = 178/239 (74.48%), Query Frame = 2
Query:  158 EALNPLFSSVSSAFPPKPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            E L+P+ S+ S  F  K    FS+   +  +VVCASK +N  PLTGV+F PFEEVKKEL LVPTVPQ+SLARHK++D CEAA+NEQINVEYNVSYVYH M+AYFDRDNVALKGL                KLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME                H VA +NNDVQLADFVESKYL EQVEAIK ISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:   17 ENLSPMLSTSSQGFVLK---NFSTKSRNGLLVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVAQLRRVGKGHGVWHFDQMLL 252          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 5.347e-83
Identity = 162/235 (68.94%), Postives = 176/235 (74.89%), Query Frame = 2
Query:  170 PLFSSVSSAFPPKPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            PL +S SS       +R+S     N +V CA+K+ NN PLTGV+F PFEEVKKELDLVPTVPQ SLAR K+TDDCEA INEQINVEYNVSYVYHAMFAYFDRDNVALKGL                KLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME                H VA+KNNDVQLADF+ES++L EQVEAIKKISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:   21 PLPNSSSSGI-----IRYSQSLGKN-LVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLL 249          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 283.108 bits (723), Expect = 1.410e-75
Identity = 152/233 (65.24%), Postives = 170/233 (72.96%), Query Frame = 2
Query:  179 SSVSSAFPPKPSLRFSSPKNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +S  S F P      S P    G+VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ E+A+NEQINVEYNVSYVYHAMFAYFDRDNVAL+GL                KLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME                H VA KN DVQLADFVE++YL EQVEAIK+ISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:   10 ASSLSLFSPNAEPPRSVPAR--GLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLL 240          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 283.108 bits (723), Expect = 1.410e-75
Identity = 152/241 (63.07%), Postives = 168/241 (69.71%), Query Frame = 2
Query:  152 QKEALNPLFSSVSSAFPPKPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            Q E L+PLFSS  S           SPKN N  VV ASK  N+ PLTGV+F PFEE+KKEL LVP VP  SL R K++DDCEAAINEQINVEYN SYVYHAMFAYFDRDNVALKGL                KLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME                H VA+++NDV LADF+ES++L EQV+AIKKISEYVAQLRRVGQGHGVW FDQ  L
Sbjct:   15 QGENLSPLFSSSKSF----------SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVAQLRRVGQGHGVWQFDQMLL 245          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 280.411 bits (716), Expect = 9.142e-75
Identity = 151/236 (63.98%), Postives = 171/236 (72.46%), Query Frame = 2
Query:  179 SSVSSAFPPKPSLRFSSP---KNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +S  S F P      S P    N + +VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ EAA+NEQINVEYNVSYVYHA+FAYFDRDNVAL+GL                KLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME                H VA KN DVQLADFVES++L EQVE+IK+ISEYVAQLRRVG+GHGVWHFDQ  L
Sbjct:    8 ASSLSLFNPNAEPSRSVPVLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLL 243          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 5.925e-74
Identity = 147/241 (61.00%), Postives = 173/241 (71.78%), Query Frame = 2
Query:  155 KEALNPLFSSVSSAFPPKPSLRFSSPKNDNGVVVC-ASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            K+ ++PL  S+SS      +LR SS K+ N      ASK++    L+GV+F PF+EVKKELDLVPT   LSLAR K++D+CEAAINEQINVEYNVSYVYHAM+AYFDRDN+ALKGL                KLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME                H VA+KNNDV LADF+ES++L EQVEAIK ISEYVAQLRRVG+GHG WHF+Q  L
Sbjct:   23 KKDVSPLLPSISS------NLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVAQLRRVGKGHGTWHFNQMLL 257          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 5.546e-72
Identity = 145/244 (59.43%), Postives = 175/244 (71.72%), Query Frame = 2
Query:  152 QKEALNPLFSSVSSAFPPKPSLRFSSPKNDN-GVVVCASKNANN--SPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            +K+ ++PLFSS SS   P      SS K+ N    + ASK++    S L+GV+F PFEEVKKE+DLVP+  QLSLARH ++ +CEAA+NEQINVEYNVSYVYHA++AYFDRDNVALKGL                 LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME                H VA+KN+DVQLADF+ES +L+EQVEAIKKISEYV+QLRR+G+GHG WHFDQ  L
Sbjct:   17 EKKDISPLFSSSSSISSP-----VSSGKSGNLSFPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVSQLRRLGKGHGTWHFDQELL 255          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 269.24 bits (687), Expect = 2.108e-71
Identity = 143/245 (58.37%), Postives = 167/245 (68.16%), Query Frame = 2
Query:  149 PQKEALNPLFSSVSSAFPPK---PSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            P    L+  ++   + FPP     +L FS   + +   V A+K  N   LTGV+F PFEEVKKE++LVPT P +SLARHKF+DD E+AIN+QINVEYNVSYVYHA++AYFDRDNV LKG                   MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME                  V  KNNDVQL DFVES++L EQVEAIKKISEYVAQLRR+G+GHGVWHFDQ  L
Sbjct:    7 PALSLLSSGYTGGGNLFPPSRNSSNLLFSP--SGSRFSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLL 249          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 256.529 bits (654), Expect = 1.414e-67
Identity = 130/227 (57.27%), Postives = 153/227 (67.40%), Query Frame = 2
Query:  203 PKPSLRFSSPK---NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            P P +R ++P+   + +    C +       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAA+NEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + ND QL DF+ES++L EQ EAI KIS+YVAQLRRVG+GHGVWHFDQ  L
Sbjct:   24 PAPVVRVAAPRGVASPSAGAACRAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLL 250          
BLAST of CK933993 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.563e-66
Identity = 131/230 (56.96%), Postives = 156/230 (67.83%), Query Frame = 2
Query:  188 SSAFPPKPSLRFSSPKNDNGVVVCASK-NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNNDVQLADFVESKYLHEQVEAIKKISEYVAQLRRVGQGHGVWHFDQXXL 874
            SSA P   SL FS      GVV  +S  + NN P+TGV+F PFEEVKK    +P     SLAR ++ D  EAAINEQINVEYNVSYVYH+M+AYFDRDNVALKGL                K MEYQN+RGG+V L  I+ P+S+F+HAEKGDALYAME                H+VA++NND QLADFVES++L EQ+EAIKKIS+++ QLR VG+GHGVWHFDQ  L
Sbjct:   24 SSASPSVMSLSFSRHTGGRGVVAASSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLL 253          
The following BLAST results are available for this feature:
BLAST of CK933993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI2_TOBAC2.171e-8467.78Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_SOYBN5.347e-8368.94Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI4_SOYBN1.410e-7565.24Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI1_TOBAC1.410e-7563.07Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_VIGUN9.142e-7563.98Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_ARATH5.925e-7461.00Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH5.546e-7259.43Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH2.108e-7158.37Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE1.414e-6757.27Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_BRANA1.563e-6656.96Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_G04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_G04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933993 ID=CK933993; Name=CK933993; organism=Citrus sinensis; type=EST; length=876bp
GGGGAACCCTCACAGCCTCACAGCCACCGTTGCGTTTCACTTCATTTGCT
CCTCTTTTCAAATCTTTTTGTCCTCGAAATCCGTCAACAAAAACATTTGA
AAACAAAAAATGTTGCTCAAAGCATCTTCAGCTTTATCGCTCGTGAGCCC
CCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGTTTCTTCAGCCTTTC
CGCCGAAACCGAGTCTCCGTTTTTCTTCACCGAAAAACGATAACGGCGTG
GTGGTCTGCGCCTCTAAAAATGCTAACAACAGCCCTTTAACCGGCGTCAT
TTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGATTTGGTCCCAACTG
TGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTGACGATTGTGAGGCC
GCAATCAACGAGCAGATCAATGTGGAATACAATGTCTCCTATGTGTATCA
TGCCATGTTTGCTTACTTTGACAGAGACAATGTCGCGCTCAAGGGTCTCG
CCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAGAGCATGCTGAGAAA
TTGATGGAATATCAGAACAAACGAGGAGGTAAAGTGAAGCTGCAATCAAT
ATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAAAGGAGATGCTTTGT
ATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAACAAATGAGAAACTC
CTCAACTTGCACAAGGTGGCCAACAAGAACAATGATGTGCAGTTGGCAGA
TTTCGTTGAAAGCAAGTATTTACACGAGCAGGTAGAAGCCATCAAAAAGA
TATCTGAATATGTTGCTCAGCTGAGAAGAGTTGGNCAGGGGCATGGTGTC
TGGCACTTTGATCAAANNNTGCTCCA
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