CK933997

Overview
NameCK933997
Unique NameCK933997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.072e-51
Identity = 70/91 (76.92%), Postives = 74/91 (81.32%), Query Frame = 3
Query:   57 MAVPXXXXXXXXXXXXXXXRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            MAVP               RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPNGFKKFVVHNT ELELLMMHNR
Sbjct:    1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFVVHNTSELELLMMHNR 91          

HSP 2 Score: 77.411 bits (189), Expect = 1.072e-51
Identity = 36/45 (80.00%), Postives = 44/45 (97.78%), Query Frame = 1
Query:  418 YHRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            ++RTYCAEIAH+VST++RK IVERA+QLD+VVTN+LARLRSQEDE
Sbjct:   89 HNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE 133          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 6.854e-51
Identity = 69/91 (75.82%), Postives = 74/91 (81.32%), Query Frame = 3
Query:   57 MAVPXXXXXXXXXXXXXXXRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            MAVP               RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYGSDKKTRHYLPNGFKKF+VHNT ELELLMMHNR
Sbjct:    1 MAVPLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYGSDKKTRHYLPNGFKKFIVHNTSELELLMMHNR 91          

HSP 2 Score: 75.0998 bits (183), Expect = 6.854e-51
Identity = 34/45 (75.56%), Postives = 43/45 (95.56%), Query Frame = 1
Query:  418 YHRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            ++RTYCAEIAH++ST++RK IVERA+QLD+VV+NKL RLRSQEDE
Sbjct:   89 HNRTYCAEIAHNISTKKRKAIVERASQLDVVVSNKLGRLRSQEDE 133          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_SPOFR (60S ribosomal protein L32 OS=Spodoptera frugiperda GN=RpL32 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.643e-37
Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR   +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKTRH LPNGF+K +VHN +ELE+LMM NR
Sbjct:   21 RHQSDRYDKLKRNWRKPRGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVRELEILMMQNR 92          

HSP 2 Score: 62.003 bits (149), Expect = 5.643e-37
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +R YCAEIAH VS+++RK IVERA QL I VTN  ARLRSQE+E
Sbjct:   91 NRKYCAEIAHGVSSKKRKTIVERAQQLSIRVTNSAARLRSQENE 134          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_RAT (60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 9.578e-37
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNK 93          

HSP 2 Score: 60.8474 bits (146), Expect = 9.578e-37
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_PIG (60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 9.578e-37
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNK 93          

HSP 2 Score: 60.8474 bits (146), Expect = 9.578e-37
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_MOUSE (60S ribosomal protein L32 OS=Mus musculus GN=Rpl32 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 9.578e-37
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNK 93          

HSP 2 Score: 60.8474 bits (146), Expect = 9.578e-37
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_MACFA (60S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 9.578e-37
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNK 93          

HSP 2 Score: 60.8474 bits (146), Expect = 9.578e-37
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_HUMAN (60S ribosomal protein L32 OS=Homo sapiens GN=RPL32 PE=1 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 9.578e-37
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNK 93          

HSP 2 Score: 60.8474 bits (146), Expect = 9.578e-37
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKAIVERAAQLAIRVTNPNARLRSEENE 135          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_BOVIN (60S ribosomal protein L32 OS=Bos taurus GN=RPL32 PE=2 SV=3)

HSP 1 Score: 113.235 bits (282), Expect = 1.248e-36
Identity = 49/72 (68.06%), Postives = 63/72 (87.50%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYGS+KKT+H LP+GF+KF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGSNKKTKHMLPSGFRKFLVHNVKELEVLLMCNK 93          

HSP 2 Score: 60.4622 bits (145), Expect = 1.248e-36
Identity = 29/44 (65.91%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I +TN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKAIVERAAQLAIRITNPNARLRSEENE 135          
BLAST of CK933997 vs. ExPASy Swiss-Prot
Match: RL32_ICTPU (60S ribosomal protein L32 OS=Ictalurus punctatus GN=rpl32 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 7.945e-36
Identity = 48/72 (66.67%), Postives = 61/72 (84.72%), Query Frame = 3
Query:  114 RPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKKTRHYLPNGFKKFVVHNTKELELLMMHNR 329
            R QSDR + ++ NWR+P+GID+RVR  FKG  LMPNIGYGS+KKT+H LP+GFKKF+VHN KELE+L+M N+
Sbjct:   22 RHQSDRYVKIRRNWRKPRGIDNRVRSGFKGQMLMPNIGYGSNKKTKHMLPSGFKKFLVHNVKELEVLLMSNK 93          

HSP 2 Score: 60.8474 bits (146), Expect = 7.945e-36
Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
Query:  421 HRTYCAEIAHDVSTRERKEIVERAAQLDIVVTNKLARLRSQEDE 552
            +++YCAEIAH+VS++ RK IVERAAQL I VTN  ARLRS+E+E
Sbjct:   92 NKSYCAEIAHNVSSKNRKVIVERAAQLAIKVTNPNARLRSEENE 135          
The following BLAST results are available for this feature:
BLAST of CK933997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RL321_ARATH1.072e-5176.9260S ribosomal protein L32-1 OS=Arabidopsis thalian... [more]
RL322_ARATH6.854e-5175.8260S ribosomal protein L32-2 OS=Arabidopsis thalian... [more]
RL32_SPOFR5.643e-3770.8360S ribosomal protein L32 OS=Spodoptera frugiperda... [more]
RL32_RAT9.578e-3768.0660S ribosomal protein L32 OS=Rattus norvegicus GN=... [more]
RL32_PIG9.578e-3768.0660S ribosomal protein L32 OS=Sus scrofa GN=RPL32 P... [more]
RL32_MOUSE9.578e-3768.0660S ribosomal protein L32 OS=Mus musculus GN=Rpl32... [more]
RL32_MACFA9.578e-3768.0660S ribosomal protein L32 OS=Macaca fascicularis G... [more]
RL32_HUMAN9.578e-3768.0660S ribosomal protein L32 OS=Homo sapiens GN=RPL32... [more]
RL32_BOVIN1.248e-3668.0660S ribosomal protein L32 OS=Bos taurus GN=RPL32 P... [more]
RL32_ICTPU7.945e-3666.6760S ribosomal protein L32 OS=Ictalurus punctatus G... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_F01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_F01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK933997 ID=CK933997; Name=CK933997; organism=Citrus sinensis; type=EST; length=749bp
GGGGCTCGCGGCCAAGCTGAACCCTAGCTCAAATCACTGGGAAGAAGGTA
AGGAAGATGGCGGTTCCGTTACTGTCGAAGAAGATAGTGAAGAAGAGGCT
GAAGAAGTTCAAGAGGCCTCAGAGCGATCGCAAGATCTCCGTCAAGGAAA
ATTGGCGCAGACCAAAGGGTATTGATTCCCGGGTGCGAAGAAAGTTCAAG
GGATGCACTCTAATGCCCAACATTGGTTATGGTTCGGACAAGAAGACACG
CCACTATCTTCCAAATGGTTTCAAGAAATTTGTGGTGCACAATACGAAAG
AGCTTGAATTGTTGATGATGCACAACAGGTAGCATTTCTTTTGTAATTCC
TGGAAGTTGCATTAATGCCTCCTGAAATTGTTTTGCCTTTTGTTTGTTGA
TTCCAACCCAATATTTTTATCATAGGACCTACTGTGCTGAAATTGCCCAT
GATGTTTCCACGAGGGAGAGGAAAGAGATTGTGGAGCGAGCTGCCCAACT
TGATATTGTTGTGACTAACAAGCTTGCTAGATTGAGAAGCCAGGAAGATG
AATGAGATTAAACAATCTGTTCTTTTTAGTAGTAGTGAGTCTTGTTTTGT
ACGCTTTATCAAAATTTTGAAAATTTTGACTTACAAAGATACGACCGTTT
GTGATTTTTTATTTTTTTTGGGATGAGTGATAATACAGTAGTTTTTATTT
CATAAAAATATTATTATTACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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