CK934025

Overview
NameCK934025
Unique NameCK934025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12327 contig Csv1_Contig12327:1..911. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934025 vs. ExPASy Swiss-Prot
Match: PAP8_ARATH (Probable plastid-lipid-associated protein 8, chloroplastic OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 3.587e-77
Identity = 150/241 (62.24%), Postives = 182/241 (75.52%), Query Frame = 3
Query:   30 MAAAAFSLTLSSPVSKPHTFCTSYYSKPINASFSASLPCK----RSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLXXXXXXXXXXXXXXLQKYCVEAPVKCPLIFGEWDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLNALDEKWIQVVFEPPELKVGGLEFRYGGQSEVKLQITYIDEKIRLGLGSRGSLFVFQRR 740
            MAA A SLT++S  S+P T   S  S+ +N     S+P K    RS R  L +V +VS  + +LRTGPDDL++++LSKV  SDGGV+L              LQKYCV+ PVK PLIFG+W+VVYCS PTSPGGGYRS  GRLFFKTKEMIQA++APD VRNKVS  A GFLDG+VSL GKL ALD +W+QV+FEPPE+KVG LEF+YG +SEVKL+ITY+DEK+RLGLGS+GSLFVF+RR
Sbjct:    1 MAATASSLTIASSFSEPRTQIHS--SRRLNLPLQYSIPYKVLRSRSRRLGL-VVSSVSAPNVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFVFRRR 238          
The following BLAST results are available for this feature:
BLAST of CK934025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAP8_ARATH3.587e-7762.24Probable plastid-lipid-associated protein 8, chlor... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004542_C06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_C06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934025 ID=CK934025; Name=CK934025; organism=Citrus sinensis; type=EST; length=912bp
GGGGAACTCGACGCCTTCATCACCTCTCCATGGCCGCTGCTGCTTTTTCT
CTTACACTCTCATCCCCTGTTTCTAAACCCCACACATTCTGCACAAGTTA
TTATTCAAAACCCATAAACGCAAGTTTTTCAGCTTCACTTCCTTGCAAAA
GAAGTCCTCGCACCGCACTGAAAATCGTCAGGGCTGTTTCCATCTCCAGC
CCAGATCTGCGAACCGGTCCCGACGATTTGGTTGCTTCTATCCTCTCCAA
GGTGAACCAATCGGATGGAGGAGTTTCACTAGCCAAAGAAGAACACAAAG
AGGTCGCTGAAGTTGCTCAAGAGTTGCAAAAATATTGTGTTGAAGCACCA
GTAAAATGCCCTTTAATCTTTGGAGAATGGGATGTCGTGTACTGTTCAGT
GCCAACTTCACCTGGGGGTGGCTACAGAAGTGCATTTGGCCGTCTTTTCT
TCAAAACAAAGGAAATGATTCAGGCTGTTGAAGCTCCTGACACTGTTAGA
AACAAGGTTTCCTTCACCGCTCTGGGTTTTCTTGACGGAGAGGTCTCTTT
GAAAGGAAAGCTTAATGCTCTGGATGAGAAATGGATTCAAGTTGTATTTG
AACCACCTGAACTGAAAGTTGGAGGATTGGAGTTCCGATATGGCGGTCAG
AGTGAGGTTAAGTTGCAGATTACATACATAGATGAAAAGATCAGGCTTGG
GTTAGGATCGAGAGGTTCACTATTTGTTTTCCAGAGACGCACACAAGCAG
CATAGCTGGACAGAGTTAAAGTTTGTGCTTGTGTTCTGTAAATCCTGAAT
GCTTCTTTGTAATGCCAAGCTATGCCCGTGAATAGCAAATTTAGGCAGAA
ACTGATGCCTCAGCGCCATACCGTATCTATCGTACACTGTAATCACAACT
CAACTGTTGTAT
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