CK934031

Overview
NameCK934031
Unique NameCK934031
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length484
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:719..1204. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 8.199e-14
Identity = 34/43 (79.07%), Postives = 39/43 (90.70%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 132
            EFL EQVEAI KI++YV+QLRMVGKGHG+WHFDQ LLH+G AA
Sbjct:  212 EFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.399e-13
Identity = 35/44 (79.55%), Postives = 41/44 (93.18%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE-GDAA 132
            E+LGEQVEAI +I++YV+QLR VGKGHG+WHFDQMLLHE GDAA
Sbjct:  204 EYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 1.827e-13
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEGDAA 132
            EFLGEQVEAI KI++YV+QLR VGKGHG+WHFDQMLLHE   A
Sbjct:  213 EFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 2.386e-13
Identity = 32/40 (80.00%), Postives = 38/40 (95.00%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHEG 123
            EFLGEQVE+I +I++YV+QLR VGKGHG+WHFDQMLLHEG
Sbjct:  207 EFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 30/39 (76.92%), Postives = 37/39 (94.87%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 120
            EFLGEQVEAI KI++YV+QLR +GKGHG+WHFDQMLL++
Sbjct:  213 EFLGEQVEAIKKISEYVAQLRRIGKGHGVWHFDQMLLND 251          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.499e-12
Identity = 29/38 (76.32%), Postives = 36/38 (94.74%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 117
            EFLGEQ+EAI KI+ Y++QLRM+GKGHG+WHFDQMLL+
Sbjct:  218 EFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 5.876e-12
Identity = 30/39 (76.92%), Postives = 36/39 (92.31%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 120
            EFL EQVE+I KIA+YV+QLR+VGKGHG+WHFDQ LLH+
Sbjct:  218 EFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 7.674e-12
Identity = 32/39 (82.05%), Postives = 35/39 (89.74%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLHE 120
            EFL EQ EAINKI+KYV+QLR VGKGHG+WHFDQMLL E
Sbjct:  214 EFLEEQGEAINKISKYVAQLRRVGKGHGVWHFDQMLLEE 252          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.002e-11
Identity = 30/39 (76.92%), Postives = 35/39 (89.74%), Query Frame = 1
Query:    1 GEFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 117
            GE+L EQVEAI KI++YV+QLR VGKGHG+WHFDQ LLH
Sbjct:  210 GEYLAEQVEAIKKISEYVAQLRRVGKGHGVWHFDQRLLH 248          
BLAST of CK934031 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.002e-11
Identity = 29/38 (76.32%), Postives = 36/38 (94.74%), Query Frame = 1
Query:    4 EFLGEQVEAINKIAKYVSQLRMVGKGHGLWHFDQMLLH 117
            EFLGEQ+EAI KI+ +++QLRMVGKGHG+WHFDQMLL+
Sbjct:  217 EFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
The following BLAST results are available for this feature:
BLAST of CK934031 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
FRI_PHAVU8.199e-1479.07Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI4_SOYBN1.399e-1379.55Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI3_SOYBN1.827e-1379.07Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI2_VIGUN2.386e-1380.00Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI2_ARATH4.499e-1276.92Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_ARATH4.499e-1276.32Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_VIGUN5.876e-1276.92Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI1_MAIZE7.674e-1282.05Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_PEA1.002e-1176.92Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI1_BRANA1.002e-1176.32Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_B05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_B05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934031 ID=CK934031; Name=CK934031; organism=Citrus sinensis; type=EST; length=484bp
GGGGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAGATCGCAAAATA
TGTTTCTCAACTGAGGATGGTTGGGAAAGGCCACGGATTATGGCACTTCG
ATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAAGAACCATATTG
TTATTTCTTTGTGCTTTAGTCAACTCTTTTCTGCCAAATGTTCTGAAGTA
TCTCTGCCACAGGAGGTTGAGTGTGTTGACAAAAAATAAGCTGAAACAGT
GTTAAGTCCTACAAAGTTAATACTCAGTAGCCTCCTTGCTTTATCATATT
AGTGTGGTCGCATTTAGATAGTCTTTTTGATGGTGCTTTTTCTTTATTTA
GTAACAGACTGTGTGAAGGGATCTAATAGTTTAAGCAGAGCACCAAATCC
ATCTTCTGATTGTATAAATATAATTAAGTTGTTCAATAAAAGTTCTGTTT
CTGCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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