CK934035

Overview
NameCK934035
Unique NameCK934035
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 8.100e-71
Identity = 134/208 (64.42%), Postives = 162/208 (77.88%), Query Frame = 2
Query:  128 MTSASPPVLPISNXXXXXXXXXXXXXXXXXXXATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIGG 751
            M S++PPVLPISN                   ATPAFR  IN I+++++ G ++RRPWAELADRS  SKPES S+A +RIRKNYSYF+VNYLT       FSL+T+PFSL+ L+ LLASW+FLYLFRP+DQP+V+FGRTFS+RETLG LI+ SIFV FLT VGS+L+SA+M+G  LICAHGAFR PEDLFLDEQEP A+TGFLSF+GG
Sbjct:    1 MASSAPPVLPISNPQTVPSAAPSSVESQPPI-ATPAFRNFINQITETVKNGLSKRRPWAELADRSALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLYLFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFRAPEDLFLDEQEP-AATGFLSFLGG 206          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 1.296e-60
Identity = 117/205 (57.07%), Postives = 149/205 (72.68%), Query Frame = 2
Query:  137 ASPPVLPISNXXXXXXXXXXXXXXXXXXXATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIGG 751
            A+PP LPIS+                   +TPAFR  ++ +S S+R   +QRRPW EL DRS  S+PES ++A  RIR+N  YF+VNY+T        SL+++PFSLL+L+ L  +WIFLYLFRPSDQPLVV GRTFS+RETLGVL++L+I V FLTSVGS+L SA+M+G G++C HGAFRVPEDLFLD+QEP A+TG LSF+ G
Sbjct:    3 ANPPTLPISDHSGGGSQSQQPV-------STPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAISRPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRPSDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPEDLFLDDQEP-ANTGLLSFLSG 199          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.530e-58
Identity = 112/205 (54.63%), Postives = 144/205 (70.24%), Query Frame = 2
Query:  137 ASPPVLPISNXXXXXXXXXXXXXXXXXXXATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIGG 751
            A+PP LP++N                    TPAFR   + +S S+R G +QRRPW EL DRS  ++PES ++A  RIRKN +YF+VNY+        FSL ++P SLL+L+GLL  W+FLYLFRPSDQPLVVFGRTFS+RETL  L++ +I V F+TSVGS+L SA+M+G  ++C HGAF VP+DLFLDEQEP A+ G LSF+GG
Sbjct:    2 ATPPTLPVTNQQAVQSQPPIN---------TPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMARPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRPSDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDDLFLDEQEP-ANAGLLSFLGG 196          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 4.315e-56
Identity = 113/207 (54.59%), Postives = 144/207 (69.57%), Query Frame = 2
Query:  128 MTSASPPVLPISNXXXXXXXXXXXXXXXXXXXATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIG 748
            M S +PPVLPIS                      P  RA +N +++++  G ++ RPW+EL DRS F+KP+S SEA  R RKN SYFRVNY+        FSL+ +PFSL++L+ L ASW+FLYLFRPSD+PL++FGR+FSE ETLG LI+ +I V F TSVGS+LISA+M+G   IC HGAFR P+DLFLDEQ+ +AS GFLSFIG
Sbjct:    1 MVSTNPPVLPISTTATDTTNQPPIVTAVVESQP-PVVRAFVNGVTETVCGGLSRSRPWSELLDRSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFLYLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAFRAPDDLFLDEQDHAAS-GFLSFIG 205          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 4.039e-54
Identity = 107/205 (52.20%), Postives = 144/205 (70.24%), Query Frame = 2
Query:  134 SASPPVLPISNXXXXXXXXXXXXXXXXXXXATPAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSFIG 748
            S+SP +LP++N                    + AFR  ++ +S SLR   +QRRPW EL DRS F++P+S +++  RIRKN +YF+VNY         FSL+++PFSLL+L+ LL SW+FLYLFR SDQPLV+FGR+FS+RETL  L++ +I V F+TSVGS+L SA+ +G  ++C HGAFRVP+DLFLDEQEP A+ G LSFIG
Sbjct:    2 SSSPAILPVTNQQAATQSQPPIN--------SHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFARPDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSSDQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDLFLDEQEP-ANAGLLSFIG 197          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1B6_ARATH (PRA1 family protein B6 OS=Arabidopsis thaliana GN=PRA1B6 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.635e-48
Identity = 92/170 (54.12%), Postives = 121/170 (71.18%), Query Frame = 2
Query:  233 AFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLSF 742
            + R L++ +  ++R+  A  RPWAEL DRS FS+P S SEAT R+RKN+SYFR NY+T        SL+T+PF+L +L  L ASW+FLY FRP+DQPLV+ GRTFS+ ETLG+L + ++ V F+TSVGS+L+S + VG   +  HGAFR PEDLFL+EQE   S  F  F
Sbjct:   25 SLRVLLSRVLATVRHASADARPWAELVDRSAFSRPPSLSEATSRVRKNFSYFRANYITLVAILLAASLLTHPFALFLLASLAASWLFLYFFRPADQPLVIGGRTFSDLETLGILCLSTVVVMFMTSVGSLLMSTLAVGIMGVAIHGAFRAPEDLFLEEQEAIGSGLFAFF 194          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.146e-24
Identity = 61/163 (37.42%), Postives = 86/163 (52.76%), Query Frame = 2
Query:  230 PAFRALINHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPS 718
            P    +   I+   R G A RRPW ++ D   F+ P   +    RIR N  YF+ NY          SLI NPFSLL+L+ LL +W+FLY  R  D+PL VF R    R  L ++ V+++ + FLT     +  A++ GA  + +H A R  EDLF  ++E S
Sbjct:   16 PKLEYITRGINQHKRSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPFSLLVLLALLGAWLFLYFLR--DEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAIVAGALAVLSHAAVRKTEDLFQTDEETS 176          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 4.076e-22
Identity = 59/167 (35.33%), Postives = 90/167 (53.89%), Query Frame = 2
Query:  248 INHISDSLRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSA--STGFLSF 742
            I+     ++ G A RRPW  + D    + P  F +A  RI+ N  YFR NY          SL+ +P SL++L  L+  WIFLY  R  D+PLVVFG    +R  L  L VL++ +  LT   S ++ +++  A L+  H A R  ++LFLDE+  +   ++G +S+
Sbjct:   22 ISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLR--DEPLVVFGYQIDDRTVLIGLSVLTVVMLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLDEEAAAVTEASGLMSY 186          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.023e-21
Identity = 57/157 (36.31%), Postives = 84/157 (53.50%), Query Frame = 2
Query:  269 LRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLS 739
            ++ G A RR W  + D      P   S+A  RI+ N +YFR+NY         FSLI +P SL++   L+  WIFLY  R  D+P+ +F     +R  L VL VL++ +  LT+    ++ A++ GA L+  H   R  EDLFLDE+  +  T  L+
Sbjct:   29 IKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLR--DEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLDEEAATTETSGLT 183          
BLAST of CK934035 vs. ExPASy Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.507e-21
Identity = 65/177 (36.72%), Postives = 91/177 (51.41%), Query Frame = 2
Query:  224 ATPAFRALINHISDS-----LRYGFAQRRPWAELADRSGFSKPESFSEATLRIRKNYSYFRVNYLTXXXXXXXFSLITNPFSLLMLVGLLASWIFLYLFRPSDQPLVVFGRTFSERETLGVLIVLSIFVFFLTSVGSILISAVMVGAGLICAHGAFRVPEDLFLDEQEPSASTGFLS 739
            A+PA    +NH S S     ++ G A RR W  + D      P   S+   RI+ N +YFR NY         FSLI +P SL++  GL+  WIFLY  R  D PL VF     +R  L  L V++I +  LT+    +++A+M GA L+  H   R  +DLFLDE+  +  T  L+
Sbjct:   13 ASPA----VNHESISRAKQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLIWHPTSLIVFTGLVFLWIFLYFLR--DVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNIVAALMAGAVLVLIHAVIRKTDDLFLDEEAATTETSGLT 183          
The following BLAST results are available for this feature:
BLAST of CK934035 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
PR1B4_ARATH8.100e-7164.42PRA1 family protein B4 OS=Arabidopsis thaliana GN=... [more]
PR1B3_ARATH1.296e-6057.07PRA1 family protein B3 OS=Arabidopsis thaliana GN=... [more]
PR1B1_ARATH3.530e-5854.63PRA1 family protein B1 OS=Arabidopsis thaliana GN=... [more]
PR1B5_ARATH4.315e-5654.59PRA1 family protein B5 OS=Arabidopsis thaliana GN=... [more]
PR1B2_ARATH4.039e-5452.20PRA1 family protein B2 OS=Arabidopsis thaliana GN=... [more]
PR1B6_ARATH9.635e-4854.12PRA1 family protein B6 OS=Arabidopsis thaliana GN=... [more]
PR1F1_ARATH1.146e-2437.42PRA1 family protein F1 OS=Arabidopsis thaliana GN=... [more]
PR1F2_ARATH4.076e-2235.33PRA1 family protein F2 OS=Arabidopsis thaliana GN=... [more]
PR1F3_ARATH2.023e-2136.31PRA1 family protein F3 OS=Arabidopsis thaliana GN=... [more]
PR1F4_ARATH4.507e-2136.72PRA1 family protein F4 OS=Arabidopsis thaliana GN=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004542_B11 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IVF_B11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934035 ID=CK934035; Name=CK934035; organism=Citrus sinensis; type=EST; length=880bp
GGGGGTCTACACTCCACACGCTATAATCTATATTCGCTCCTCTTCATCCC
ACCCTGCCTCAATATCTTTCAATTCATTAGCCCCCAAAGAACGATAAGAA
AAAGGTAACAACAATAAAATTCCCAAAATGACCTCCGCATCGCCGCCAGT
CCTCCCAATCTCCAACTCCCAACCGACCACCACGGCGTCCTCCGCCACCT
CGGTCCAATCCCAACCACCAGTGGCGACCCCGGCTTTCCGCGCCCTAATC
AACCACATCTCCGACTCACTCCGTTACGGCTTCGCCCAGCGCCGCCCGTG
GGCCGAACTCGCCGACCGATCCGGCTTCTCCAAACCGGAGTCGTTCTCCG
AAGCCACCCTCCGCATCCGCAAGAACTACTCCTATTTCCGAGTCAATTAC
CTCACGGTCGTCGCTGTCGTCGTTGCTTTCTCTCTCATCACCAATCCTTT
CTCTCTCCTCATGCTCGTCGGACTCCTTGCCTCCTGGATCTTCCTCTACC
TCTTCCGCCCCTCCGATCAGCCGCTCGTCGTATTCGGCCGCACGTTCAGC
GAGCGCGAGACGCTTGGTGTCTTGATCGTTTTGAGCATCTTCGTCTTTTT
CCTCACCAGTGTCGGATCGATCTTGATCTCGGCTGTGATGGTGGGGGCTG
GTCTGATTTGTGCTCACGGTGCGTTTAGGGTTCCTGAAGATCTGTTCTTG
GACGAACAAGAGCCTTCTGCCAGCACCGGATTCTTGTCCTTCATCGGTGG
CGCCGCCTCGAATGCCGCCGCCACCGCTGCACCGGCCGTTTCCGCACGCG
TTTGAGGTAGCGGTTTGATTTGCTAATTGAATGATTTCTAGTTTTTTGTT
TTTTTTTGGGGGGGGCTGTTGAAAGCCGNN
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