CK934057

Overview
NameCK934057
Unique NameCK934057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length903
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CK934057_ssr137 microsatellite CK934057_ssr137:137..148. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2701 contig Csv1_Contig2701:18..920. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL1_STRAW (Transaldolase 1 OS=Streptomyces avermitilis GN=tal1 PE=3 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.401e-41
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 3
Query:  333 EGQSPWYDNLCRP-VT--DLLPLIA-SGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLE---ASGLSDLSRVYSVASFFVSR 902
            EG S W D+L R  +T  +L  LIA   V GVT+NP+IFQ AI S   Y  Q  +L   G  ++ A   +   D++ A  +   +YD T G DG VS+EV PRLA DT+ T+  AK L  +V+RPNV IKIPAT   +P+I EVI  GISVNVTLIFSL RY EV+DAYL GLE   A+G+ DL+ ++SVASFFVSR
Sbjct:   17 EGVSIWLDDLSRKRITSGNLAELIAHKHVVGVTTNPSIFQAAIGSGEGYEEQLADLAVRGVTVDEAVRMMTTADVRAAADILRPVYDATGGRDGRVSIEVDPRLAHDTEATIAEAKQLAWLVDRPNVMIKIPATKAGLPAITEVIGLGISVNVTLIFSLERYREVMDAYLAGLERAQAAGI-DLAGIHSVASFFVSR 212          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL2_STRCO (Transaldolase 2 OS=Streptomyces coelicolor GN=tal2 PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.390e-41
Identity = 101/197 (51.27%), Postives = 130/197 (65.99%), Query Frame = 3
Query:  333 EGQSPWYDNLCRP-VT--DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS---GLSDLSRVYSVASFFVSR 902
            EG + W D+L R  +T  +L  LI    V GVT+NP+IFQKAIS  + Y+ Q  +L   G  +E A   +   D++DA  +   +YD T G DG VS+EV PRLA +T  TV  AK L  +V+RPN +IKIPAT   +P+I E I  GISVNVTLIFSL RY +V+DA+L GLE +   GL DLS+++SVASFFVSR
Sbjct:   11 EGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQLADLAVRGVTVEEAIRMITTADVRDAADILRPVYDNTGGKDGRVSIEVDPRLAHNTHATVAEAKQLAWLVDRPNTFIKIPATEAGLPAIAETIGLGISVNVTLIFSLERYRKVMDAFLTGLEKAKERGL-DLSQIHSVASFFVSR 206          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_RENSM (Transaldolase OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=tal PE=3 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.323e-41
Identity = 98/195 (50.26%), Postives = 125/195 (64.10%), Query Frame = 3
Query:  336 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVYSVASFFVSR 902
            G S W D+L R       L  LI    V GVT+NP+IFQ AIS   +Y  Q  EL   G D+EAA +++  +D+ +AC  F  I   + G DG VS+EV PR A DTQGT+E AK LH  V + NV+IKIPAT   + +I E +  GISVNVTLIFSL RY  VI+A+L G+E +  +  DLS+++SVASFFVSR
Sbjct:   12 GVSIWLDDLSRERLTSGSLQKLIDEKNVVGVTTNPSIFQAAISKGTSYEQQVSELAAQGADVEAAVFQITTQDVANACDFFAGIAVASKGVDGRVSIEVDPRKAWDTQGTIEEAKRLHAAVGKDNVHIKIPATLEGLEAITETLGAGISVNVTLIFSLGRYRAVINAFLLGIEKAKANGHDLSQIHSVASFFVSR 206          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_MYCTU (Transaldolase OS=Mycobacterium tuberculosis GN=tal PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  336 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVYSVASFFVSR 902
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS+++SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_MYCTA (Transaldolase OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=tal PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  336 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVYSVASFFVSR 902
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS+++SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_MYCBT (Transaldolase OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=tal PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  336 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVYSVASFFVSR 902
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS+++SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_MYCBP (Transaldolase OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=tal PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  336 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVYSVASFFVSR 902
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS+++SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_MYCBO (Transaldolase OS=Mycobacterium bovis GN=tal PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 92/195 (47.18%), Postives = 132/195 (67.69%), Query Frame = 3
Query:  336 GQSPWYDNLCRPVT---DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEASGLS--DLSRVYSVASFFVSR 902
            G S W D+L R      +L  LI    V GVT+NP+IFQKA+S  + Y+ Q  EL   G D++A    +   D++ AC +    +++++G DG VS+EV PRLA +T+ T++ A  L K+V+RPN++IKIPAT   +P+I  V+++GISVNVTLIFS+ RY EV+DAYL G+E +  +   LS+++SVASFFVSR
Sbjct:   15 GVSVWLDDLSRDRLRSGNLQELIDTKSVVGVTTNPSIFQKALSEGHTYDAQIAELAARGADVDATIRTVTTDDVRSACDVLVPQWEDSDGVDGRVSIEVDPRLAHETEKTIQQAIELWKIVDRPNLFIKIPATKAGLPAISAVLAEGISVNVTLIFSVQRYREVMDAYLTGMEKARQAGHSLSKIHSVASFFVSR 209          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL_FRAAA (Transaldolase OS=Frankia alni (strain ACN14a) GN=tal PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 1.186e-40
Identity = 94/195 (48.21%), Postives = 130/195 (66.67%), Query Frame = 3
Query:  336 GQSPWYDNLCRP---VTDLLPLIAS-GVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS--GLSDLSRVYSVASFFVSR 902
            G + W D++ R      +L  L+A+  V GVTSNP IFQKAI+SS+ YN Q R+L   G D+  A   +   D+++AC +   +YD + G DG VS+EV PRLA + + TV  A+ L  +V+RPN++IKIPAT   +P+I E ++QGISVNVTLIF L RY+ VIDA++ G+E +     D+S + SVASFFVSR
Sbjct:   12 GVAVWLDDISRDRLRTGNLADLVANRSVVGVTSNPTIFQKAIASSDLYNEQLRDLKVRGVDVGEAVRAITAADVREACDVLRGVYDASGGVDGRVSLEVDPRLAHEAERTVAEARALWWLVDRPNLFIKIPATQDGLPAITETLAQGISVNVTLIFGLDRYDAVIDAFMSGVEQAIEAGRDVSDLASVASFFVSR 206          
BLAST of CK934057 vs. ExPASy Swiss-Prot
Match: TAL2_STRAW (Transaldolase 2 OS=Streptomyces avermitilis GN=tal2 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.549e-40
Identity = 101/198 (51.01%), Postives = 131/198 (66.16%), Query Frame = 3
Query:  330 QEGQSPWYDNLCRP-VT--DLLPLI-ASGVRGVTSNPAIFQKAISSSNAYNNQFRELVQSGKDIEAAYWELVIKDIQDACKLFESIYDETNGGDGYVSVEVSPRLADDTQGTVEAAKWLHKVVNRPNVYIKIPATAPCVPSIKEVISQGISVNVTLIFSLARYEEVIDAYLDGLEAS---GLSDLSRVYSVASFFVSR 902
            +EG + W D+L R  +T  +L  LI    V GVT+NP+IFQKAIS  + Y+ Q  +L      +E A   +   D++DA  +   ++D T+G DG VS+EV PRLA +T+ TV  AK L  +V+RPN  IKIPAT   +P+I EVI  GISVNVTLIFSL RY  V+DAYL GLE +   GL DLS+++SVASFFVSR
Sbjct:   10 KEGVAIWLDDLSRKRITSGNLAELIDQQHVVGVTTNPSIFQKAISQGDGYDQQVSDLAARRVTVEEAIRMITTADVRDAADILRPVFDATDGQDGRVSIEVDPRLAHNTKATVAEAKQLAWLVDRPNTLIKIPATKAGIPAITEVIGLGISVNVTLIFSLERYRMVMDAYLAGLEKAKERGL-DLSKIHSVASFFVSR 206          
The following BLAST results are available for this feature:
BLAST of CK934057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
TAL1_STRAW1.401e-4152.28Transaldolase 1 OS=Streptomyces avermitilis GN=tal... [more]
TAL2_STRCO2.390e-4151.27Transaldolase 2 OS=Streptomyces coelicolor GN=tal2... [more]
TAL_RENSM5.323e-4150.26Transaldolase OS=Renibacterium salmoninarum (strai... [more]
TAL_MYCTU1.186e-4047.18Transaldolase OS=Mycobacterium tuberculosis GN=tal... [more]
TAL_MYCTA1.186e-4047.18Transaldolase OS=Mycobacterium tuberculosis (strai... [more]
TAL_MYCBT1.186e-4047.18Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBP1.186e-4047.18Transaldolase OS=Mycobacterium bovis (strain BCG /... [more]
TAL_MYCBO1.186e-4047.18Transaldolase OS=Mycobacterium bovis GN=tal PE=3 S... [more]
TAL_FRAAA1.186e-4048.21Transaldolase OS=Frankia alni (strain ACN14a) GN=t... [more]
TAL2_STRAW1.549e-4051.01Transaldolase 2 OS=Streptomyces avermitilis GN=tal... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_H01 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934057 ID=CK934057; Name=CK934057; organism=Citrus sinensis; type=EST; length=903bp
GGGGGTACTTGGTTGAAGCTTACAAATCGTCGCTCTTTATTTCTGAGTTT
TTAGATTCAAGGATCAACGAGTCTTTAATGGCGACCATTTCGAAGCTTAC
AAATCCAGCTGTTTCTTCATCATCTTTGAAACCCAGATCATCATCATCCT
CACTGCCTAAATCTTTGATCAGCCTTCAAACCAAAACTGGGTTCAATTCA
AAAGTTGCGTCTTCTCAGTTGACCCTCAGAAATAACCACCCTTTGAAGGC
CTCTTTGGTTGTGAAATGTTCCCAATCTGGTGGAAATGGAAGTAGTGCAA
AGAGGACAACTCTTCACGATCTCTATGAGCAGGAAGGGCAGAGCCCTTGG
TATGATAACCTTTGCCGCCCCGTCACAGATTTGCTTCCGCTCATTGCAAG
TGGTGTTAGGGGTGTTACCAGCAACCCTGCGATTTTCCAGAAAGCAATAT
CTTCATCGAATGCTTACAATAATCAATTTAGGGAACTTGTACAATCTGGA
AAAGATATTGAAGCTGCATATTGGGAACTTGTGATTAAGGACATTCAAGA
TGCATGCAAACTTTTTGAGTCAATCTATGATGAAACCAATGGCGGTGATG
GCTATGTTTCTGTCGAAGTTTCTCCCAGACTCGCTGATGATACCCAAGGG
ACTGTGGAGGCAGCAAAATGGCTTCACAAAGTGGTTAATCGCCCCAATGT
ATACATAAAGATACCTGCCACAGCTCCTTGCGTTCCTTCTATCAAGGAAG
TTATTTCGCAGGGCATTAGTGTCAATGTGACTCTCATATTCTCCCTGGCT
AGATATGAAGAAGTCATTGATGCTTACTTGGATGGCCTTGAGGCTTCTGG
GCTGAGTGACCTTTCCAGAGTTTACAGTGTTGCATCCTTTTTCGTTAGTC
GAG
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