CK934079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934079 vs. ExPASy Swiss-Prot
Match: AVT4_YEAST (Vacuolar amino acid transporter 4 OS=Saccharomyces cerevisiae GN=AVT4 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 55/221 (24.89%), Postives = 103/221 (46.61%), Query Frame = 3 Query: 6 FEGFGMTFALESSMRERGRFSKLLAQAFTGITLVYVTFGFFGFMAYGDDTKDIVTLNLPKDWSSI-AVQMGLCVALIFTFPIMVHPVHEIIEGSL--KKSSFFQTHPCISYDNNSTTRLGK--FMIYISRXXXXXXXXXXXSFIPGFGT-----FTSLVGSTLCALISFVLPALYHLILLGSSL-----NFW--QRSLDVCILLCGLLFAVNGTYNSIVGV 617 FEG G+ ++ SMR +F +LA T+++++ G++AYG + + ++ LNLP+ + +Q+ +A++ + P+ + P +IIE K + + H ++ GK + I + I FG+ F S++GS C + ++ P++ H L G+SL FW + LD ++ G+ + +Y SI GV Sbjct: 495 FEGIGLIIPVQDSMRNPEKFPLVLALVILTATILFISIATLGYLAYGSNVQTVILLNLPQSNIFVNLIQLFYSIAIMLSTPLQLFPAIKIIENKFFPKFTKIYVKHDDLTTRVELRPNSGKLNWKIKWLKNFIRSIIVIIVVSIAYFGSDNLDKFVSVIGSLACIPLVYIYPSMLH--LRGNSLPETKGEFWRFKPMLDTILIFFGIASMLYTSYQSIFGV 713
BLAST of CK934079 vs. ExPASy Swiss-Prot
Match: S36A4_XENLA (Proton-coupled amino acid transporter 4 OS=Xenopus laevis GN=slc36a4 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.185e-11 Identity = 54/203 (26.60%), Postives = 87/203 (42.86%), Query Frame = 3 Query: 6 FEGFGMTFALESSMRERGRFSKLLAQAFTGITLVYVTFGFFGFMAYGDDTKDIVTLNLPKD-WSSIAVQMGLCVALIFTFPIMVHPVHEIIEGSLKKSSFFQTHPCISYDNNSTTRLGKFMIYISRXXXXXXXXXXXSFIPGFGTFTSLVGSTLCALISFVLPALYHLILL-GSSLNFWQRSLDVCILLCGLLFAVNGTYNSI 608 FEG G+ LE+ MR++ FSK L +T +Y++ G+ +GD K +TLNLP+D W V++ + T+ I + EII P ++ T +L + R IP S VG+ + ++ +LP L +I +L+ W DV I + G + + GTY +I Sbjct: 304 FEGIGVVLPLENRMRDKKDFSKALNIGMAIVTTLYISLATLGYFCFGDQIKGSITLNLPQDSWLYQLVKILYSFGIYVTYAIQYYVPAEII------------LPAVTSRVQKTRKL--LCEFTMRFFLVCLTCAVAVLIPRLDLVISFVGAVSSSTLALILPPLVEIITYHKENLSPWVIMKDVGIAVIGFVGFIAGTYVTI 492
BLAST of CK934079 vs. ExPASy Swiss-Prot
Match: S36A4_HUMAN (Proton-coupled amino acid transporter 4 OS=Homo sapiens GN=SLC36A4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.322e-11 Identity = 52/203 (25.62%), Postives = 90/203 (44.33%), Query Frame = 3 Query: 6 FEGFGMTFALESSMRERGRFSKLLAQAFTGITLVYVTFGFFGFMAYGDDTKDIVTLNLPKD-WSSIAVQMGLCVALIFTFPIMVHPVHEIIEGSLKKSSFFQTHPCISYDNNSTTRLGKFMIYISRXXXXXXXXXXXSFIPGFGTFTSLVGSTLCALISFVLPALYHLILLGSS-LNFWQRSLDVCILLCGLLFAVNGTYNSI 608 FEG G+ LE+ M+E RF + L +T +YVT G+M + D+ K +TLNLP+D W +V++ + T+ I + EII + +S F T + + F++ I+ IP S VG+ + ++ +LP L ++ N W ++ I G++ + GTY ++ Sbjct: 284 FEGIGVVLPLENQMKESKRFPQALNIGMGIVTTLYVTLATLGYMCFHDEIKGSITLNLPQDVWLYQSVKILYSFGIFVTYSIQFYVPAEIIIPGI--TSKFHT----KWKQICEFGIRSFLVSIT--------CAGAILIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKEHYNIWMVLKNISIAFTGVVGFLLGTYITV 472 The following BLAST results are available for this feature:
BLAST of CK934079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934079 ID=CK934079; Name=CK934079; organism=Citrus sinensis; type=EST; length=745bpback to top |