CK934084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: U172_ARATH (UPF0172 protein At5g55940 OS=Arabidopsis thaliana GN=EMB2731 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.645e-82 Identity = 148/201 (73.63%), Postives = 173/201 (86.07%), Query Frame = 2 Query: 86 GELKYELSQNAYIKLVLHARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANVVLMDYISSEKWQXXXXXXXXXXXISKDWLNPDLF 688 GELKYE+SQNAYIKLVLH+ +HKTAAVNGVL+GR+SP++D VVEI+DSVPLFHS+L LLP LEISLIMIEEHY AQGL IVGYFHANERFDD+EL +AKNIG+HI RYFPQ +LLL+NKKLEAL KGK+RSPVMQL ++DASKNW++VG+DGG +LL KEP+ANVVL DYISSEKW+ ++KDWLNP LF Sbjct: 7 GELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSNLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILLLNNKKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISSEKWKDVTDVDDHLDDVTKDWLNPGLF 207
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: F158A_RAT (UPF0172 protein FAM158A OS=Rattus norvegicus GN=Fam158a PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19 Identity = 52/129 (40.31%), Postives = 75/129 (58.14%), Query Frame = 2 Query: 83 MGELKYELSQNAYIKLVLHARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 469 MGE+ E+S AY K+ LHA ++ AAVNG+LL + + + + D VPLFHSHL L LE++L ++ + GL + GY+HAN DD +A I I +FP +++LDNKKL P+ Sbjct: 1 MGEV--EISARAYGKMCLHASRYPHAAVNGLLLAPATRSGECLC-LTDCVPLFHSHLALSVMLEVALNQVDVWATQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPNAVLIMLDNKKLVTWPR 126
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: F158A_MOUSE (UPF0172 protein FAM158A OS=Mus musculus GN=Fam158a PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.585e-19 Identity = 52/129 (40.31%), Postives = 76/129 (58.91%), Query Frame = 2 Query: 83 MGELKYELSQNAYIKLVLHARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 469 MGE+ E+S AY K+ LHA ++ AAVNG+LL + + + + D VPLFHSHL L LE++L ++ + GL + GY+HAN DD +A I I +FP+ +++LDNKKL P+ Sbjct: 1 MGEV--EISARAYGKMCLHASRYPHAAVNGLLLAPATGSGECLC-LTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAVLDDQSPGPLALKIAGRIAEFFPRAVLIMLDNKKLVTRPR 126
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: F158A_HUMAN (UPF0172 protein FAM158A OS=Homo sapiens GN=FAM158A PE=2 SV=3) HSP 1 Score: 93.5893 bits (231), Expect = 1.675e-18 Identity = 50/129 (38.76%), Postives = 77/129 (59.69%), Query Frame = 2 Query: 83 MGELKYELSQNAYIKLVLHARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPK 469 MGE+ E+S AY+K+ LHA ++ AAVNG+ L +P++ + + D VPLFHSHL L LE++L ++ + GL + GY+HAN +D +A I I +FP +++LDN+KL P+ Sbjct: 1 MGEV--EISALAYVKMCLHAARYPHAAVNGLFLAP-APRSGECLCLTDCVPLFHSHLALSVMLEVALNQVDVWGAQAGLVVAGYYHANAAVNDQSPGPLALKIAGRIAEFFPDAVLIMLDNQKLVPQPR 126
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: U172_DROME (UPF0172 protein CG3501 OS=Drosophila melanogaster GN=CG3501 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 7.783e-16 Identity = 46/118 (38.98%), Postives = 70/118 (59.32%), Query Frame = 2 Query: 98 YELSQNAYIKLVLHARKHKTAAVNGVLLGRVSPQNDAVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSI-AKNIGNHICRYFPQCAVLLLDNK 448 Y++S+ AY KL+ HA K+ AVNG+LL + + V EI D++PLFH L + P E++L++I+ H +GL I GY+ A E F D ++D A I + I F +++DNK Sbjct: 4 YKVSERAYAKLIFHAAKYPHQAVNGLLLAEKTSKGSQV-EIVDAIPLFHQCLYVTPMAEVALMLIDAHAEREGLVIAGYYAAPENFYDNQVDKTPAAKIADKIQENFKNACFVVVDNK 120
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: CX4NB_MOUSE (Neighbor of COX4 OS=Mus musculus GN=Cox4nb PE=1 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 5.045e-15 Identity = 55/204 (26.96%), Postives = 92/204 (45.10%), Query Frame = 2 Query: 101 ELSQNAYIKLVLHARKHKTAAVNGVLLG-RVSPQND------AVVEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANVVLMDYISSEKWQXXXXXXXXXXXISKDWLNPDLFK 691 +L+ AY K+VLH K+ AVNG+L+ R P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K +P + +Y + ++ W+ D P A + + S ++ I DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGSHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFGDAALIMVDNAKFTM----DCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRSDWTNPEINK 201
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: CX4NB_RAT (Neighbor of COX4 OS=Rattus norvegicus GN=Cox4nb PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.588e-15 Identity = 55/204 (26.96%), Postives = 91/204 (44.61%), Query Frame = 2 Query: 101 ELSQNAYIKLVLHARKHKTAAVNGVLLG-RVSPQNDAV------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANVVLMDYISSEKWQXXXXXXXXXXXISKDWLNPDLFK 691 +L+ AY K+VLH K+ AVNG+L+ R P+ + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K +P + +Y + ++ W+ D P A + + S ++ I DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAERQRPRKEHPPGAGNHTLFVDCIPLFHGTLALTPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDAALIMVDNAKFTM----DCAAPTIHVYEQHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRSDWTNPEINK 201
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: CX4NB_HUMAN (Neighbor of COX4 OS=Homo sapiens GN=COX4NB PE=1 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.270e-14 Identity = 54/207 (26.09%), Postives = 91/207 (43.96%), Query Frame = 2 Query: 101 ELSQNAYIKLVLHARKHKTAAVNGVLLG-RVSPQNDAV---------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANVVLMDYISSEKWQXXXXXXXXXXXISKDWLNPDLFK 691 +L+ AY K+VLH K+ AVNG+L+ + P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K +P + +Y ++ W+ D P A + + S ++ I DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVNGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDHSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTKFTM----DCVAPTIHVYEHHENR-WRC--RDPHHDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINK 204
BLAST of CK934084 vs. ExPASy Swiss-Prot
Match: CX4NB_BOVIN (Neighbor of COX4 OS=Bos taurus GN=COX4NB PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 9.514e-14 Identity = 54/207 (26.09%), Postives = 90/207 (43.48%), Query Frame = 2 Query: 101 ELSQNAYIKLVLHARKHKTAAVNGVLLG-RVSPQNDAV---------VEIADSVPLFHSHLGLLPNLEISLIMIEEHYSAQGLGIVGYFHANERFDDLELDSIAKNIGNHICRYFPQCAVLLLDNKKLEALPKGKDRSPVMQLYIRDASKNWKLVGSDGGCQLLTKEPAANVVLMDYISSEKWQXXXXXXXXXXXISKDWLNPDLFK 691 +L+ AY K+VLH K+ AV+G+L+ + P+ + + D +PLFH L L P LE++L +I+ I GY+ ANER D + +A+ + + I F A++++DN K P + +Y +K W+ D P A + + S ++ I DW NP++ K Sbjct: 5 KLTTQAYCKMVLHGAKYPHCAVDGLLVAEKQKPRKEHLPLGGPGAHHTLFVDCIPLFHGTLALAPMLEVALTLIDSWCKDNSYVIAGYYQANERVKDASPNQVAEKVASRIAEGFSDTALIMVDNTKFTM----DCVVPTIHVYEHHENK-WRC--RDPHYDYCEDWPEAQRISASLLDSRSYETLVDFDNHLDDIRNDWTNPEINK 204 The following BLAST results are available for this feature:
BLAST of CK934084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934084 ID=CK934084; Name=CK934084; organism=Citrus sinensis; type=EST; length=906bpback to top |