CK934111

Overview
NameCK934111
Unique NameCK934111
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length842
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig805 contig Csv1_Contig805:12..853. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: TRNH_DATST (Tropinone reductase homolog OS=Datura stramonium PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.657e-84
Identity = 155/259 (59.85%), Postives = 193/259 (74.52%), Query Frame = 3
Query:   15 MGEQELISRSKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            M  +E+    +RWSL GMTALVTGGTRGIG+A VEELA FGA V+TCSR+Q +LD  L +W+ KGFKV+G VCD+SS  QR+ L+E+VTS F GKLNIL+NNA     K   + TAED S +  TNFE+ ++L QLAHPL KASGN SIVF SS  GV  +P  S+Y A KGA+NQ+TK+LACEWAKD+IR N VAPW+I T +I+   + P+  + ++ +  + P+ RAGEP EVSSLV +LCLP ASYITGQIICVD
Sbjct:    1 MAGREIGGGDRRWSLRGMTALVTGGTRGIGYAIVEELANFGAEVYTCSRSQNDLDECLEKWRRKGFKVSGPVCDVSSISQRQTLMESVTSSFNGKLNILINNAGTTIPKEATNFTAEDYSIIMGTNFEASYNLCQLAHPLLKASGNASIVFNSSAAGVIAVPLSSIYAASKGAINQVTKSLACEWAKDSIRVNAVAPWIINTPIIEAACQVPSQKKNIESLIGRAPMKRAGEPSEVSSLVTYLCLPTASYITGQIICVD 259          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: TRNH1_ARATH (Tropinone reductase homolog At1g07440 OS=Arabidopsis thaliana GN=At1g07440 PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.458e-82
Identity = 154/251 (61.35%), Postives = 186/251 (74.10%), Query Frame = 3
Query:   39 RSKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            +S+RWSL   T LVTGGT+GIGHA VEE A FGA++HTC+RN+ EL+  L +W+ KGF+VTGSVCD S R +REKL++TV+S+F GKL+IL+NN   +  KPTLD TAED S   STN ES +HLSQLAHPL KASG G+I+F+SS+ GV      S+Y A KGA+NQL +NLACEWA D IR N VAP VI T    P  E     EF   +  + P+GR GEP+EVSSLVAFLC+PAASYITGQ ICVD
Sbjct:    6 QSQRWSLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVSASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIAT----PLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSLVAFLCMPAASYITGQTICVD 252          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: TRN1_DATST (Tropinone reductase 1 OS=Datura stramonium GN=TR1 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.750e-81
Identity = 148/249 (59.44%), Postives = 188/249 (75.50%), Query Frame = 3
Query:   48 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIK-PFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            RWSL G TALVTGG++GIG+A VEELA  GA V+TCSRN+ ELD  L  W+ KG  V GSVCDL SR +R+KL++TV  +F GKLNILVNNA +V  K   D T +D + +  TNFE+ +HLSQ+A+PL KAS NG+++F+SS+ G   +PSVSLY A KGA+NQ+TK+LACEWAKDNIR N+VAP VI T +++   ++ P   E +D    +TP+GRAG+P EVS+L+AFLC PAASYITGQII  D
Sbjct:   16 RWSLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSALPSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQEVSALIAFLCFPAASYITGQIIWAD 264          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: TRN2_HYONI (Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.561e-76
Identity = 145/248 (58.47%), Postives = 180/248 (72.58%), Query Frame = 3
Query:   48 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            RW+L G TALVTGG+RGIG+  VEELA  GA V+TCSRNQ ELD  L +W++KGF V  SVCDLSSR +RE+ ++TV++ F GKLNILVNNA IV  K   D T ED S + S NFE+ +HLS LAHP  KAS  G++VFISS+ G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P VI TSM++   + P   E LD +  +  + R GEP E++++VAFLC PAASY+TGQII VD
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELANLGASVYTCSRNQKELDECLTQWRSKGFNVEASVCDLSSRSEREEFMKTVSNHFHGKLNILVNNAGIVIYKEAKDYTMEDYSHIMSINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSMVEMTIQDPEQKENLDKLIDRCALRRMGEPKELAAVVAFLCFPAASYVTGQIIYVD 251          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: TRN2_DATST (Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1)

HSP 1 Score: 283.493 bits (724), Expect = 1.012e-75
Identity = 144/248 (58.06%), Postives = 180/248 (72.58%), Query Frame = 3
Query:   48 RWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIVFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICVD 791
            RW+L G TALVTGG+RGIG+  VEELA  GA V+TCSRNQ EL+  L +W++KGFKV  SVCDLSSR +R++L+ TV + F GKLNILVNNA IV  K   D T ED S + S NFE+ +HLS LAHP  KAS  G++VFISSV G   +P  ++YGA KGAM+QLT+ LA EWAKDNIR N V P VI TS+++   + P   E L+ +  +  + R GEP E++++VAFLC PAASY+TGQII VD
Sbjct:    4 RWNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKELAAMVAFLCFPAASYVTGQIIYVD 251          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS4_BOVIN (Dehydrogenase/reductase SDR family member 4 OS=Bos taurus GN=DHRS4 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.024e-35
Identity = 93/250 (37.20%), Postives = 134/250 (53.60%), Query Frame = 3
Query:   42 SKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAIV-FVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 788
            ++R  L+   ALVT  T GIG A    LA+ GA V   SR Q  +D  +   K +G  VTG+VC +   E RE+L+ T   +  G ++IL++NAA+  F    +D+  E    +   N ++   L++   P     G GSIV +SS+      PS+  Y   K A+  LTKNLA E A+ N+R N +AP +I+TS  +   E PA  E    I     I R G+P+E + +V+FLC   ASYITG+ + V
Sbjct:    7 ARRNPLDNKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDRAVATLKGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGVDILISNAAVSPFFGSLMDVPEEVWDKILDVNVKATALLTKAVVPEMAKRGGGSIVIVSSIAAYSPFPSLGPYNVSKTALLGLTKNLALELAESNVRVNCLAPGLIRTSFSRVLWEDPARQE---SIKATFQIKRIGKPEECAGIVSFLCSEDASYITGETVVV 252          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS4_RABIT (Dehydrogenase/reductase SDR family member 4 OS=Oryctolagus cuniculus GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.635e-33
Identity = 90/250 (36.00%), Postives = 135/250 (54.00%), Query Frame = 3
Query:   42 SKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAI-VFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 788
            ++R  L    A+VT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E RE+L+ T  ++  G ++ILV+NAA+  F    +D+T E    +   N +++  +++   P  +  G GS+V ++S+        +  Y   K A+  LTKNLA E A  NIR N +AP +IKTS  K   E  A  E    I ++  I R G+P+E + +V+FLC   ASYITG+ + V
Sbjct:    7 TRRDPLANKVAIVTASTDGIGLAIARRLAQDGAHVVISSRKQQNVDRAVAALQAEGLSVTGTVCHVGKAEDRERLVATALNL-HGGIDILVSNAAVNPFFGKLMDVTEEVWDKILDINVKAMALMTKAVVPEMEKRGGGSVVIVASIAAFNPFSGLGPYNVSKTALVGLTKNLALELAAQNIRVNCLAPGLIKTSFSKALWEDKAQEE---NIIQKLRIRRLGKPEECAGIVSFLCSEDASYITGETVVV 252          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS4_MOUSE (Dehydrogenase/reductase SDR family member 4 OS=Mus musculus GN=Dhrs4 PE=2 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 2.135e-33
Identity = 94/250 (37.60%), Postives = 128/250 (51.20%), Query Frame = 3
Query:   42 SKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAI-VFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 788
            ++R  L+   ALVT  T GIG A    LA  GA V   SR Q  +D  +   + +G  VTG VC +   E REKLI T     +G ++ILV+NAA+  F    +D+T E    V S N  +   + +   P  +  G GS+V + SV G    PS+  Y   K A+  LTKN A E A  NIR N +AP +IKT       E  A  +F   I     I R G+P++ + +V+FLC   ASYI G+ + V
Sbjct:    7 TRRNPLSNKVALVTASTDGIGFAIARRLAEDGAHVVVSSRKQQNVDRAVATLQGEGLSVTGIVCHVGKAEDREKLITTALKRHRG-IDILVSNAAVNPFFGNLMDVTEEVWDKVLSINVTATAMMIKAVVPEMEKRGGGSVVIVGSVAGFTRFPSLGPYNVSKTALLGLTKNFAAELAPKNIRVNCLAPGLIKTRFSSVLWEEKAREDF---IKEAMQIRRLGKPEDCAGIVSFLCSEDASYINGETVVV 252          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS4_PIG (Dehydrogenase/reductase SDR family member 4 OS=Sus scrofa GN=DHRS4 PE=1 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 1.059e-32
Identity = 89/249 (35.74%), Postives = 132/249 (53.01%), Query Frame = 3
Query:   45 KRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAI-VFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 788
            +R  L    ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E RE+L+    ++  G ++ILV+NAA+  F    +D T E    +   N ++   +++   P  +  G GS++ +SSVG     P++  Y   K A+  LTKNLA E A  NIR N +AP +IKT+  +      A  E++    R   I R G P++ + +V+FLC   ASYITG+ + V
Sbjct:    8 RRKPLENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNL-HGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHPFPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLR---IRRLGNPEDCAGIVSFLCSEDASYITGETVVV 252          
BLAST of CK934111 vs. ExPASy Swiss-Prot
Match: DHRS4_PONAB (Dehydrogenase/reductase SDR family member 4 OS=Pongo abelii GN=DHRS4 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 6.867e-32
Identity = 90/250 (36.00%), Postives = 129/250 (51.60%), Query Frame = 3
Query:   42 SKRWSLNGMTALVTGGTRGIGHATVEELARFGAIVHTCSRNQIELDARLHEWKNKGFKVTGSVCDLSSREQREKLIETVTSIFQGKLNILVNNAAI-VFVKPTLDITAEDMSTVSSTNFESVFHLSQLAHPLFKASGNGSIVFISSVGGVRGIPSVSLYGAYKGAMNQLTKNLACEWAKDNIRTNTVAPWVIKTSMIKPFEEGPAGSEFLDGIARQTPIGRAGEPDEVSSLVAFLCLPAASYITGQIICV 788
            ++R  L    ALVT  T GIG A    LA+ GA V   SR Q  +D  +   + +G  VTG+VC +   E RE+L+ T   +  G ++ILV+NAA+  F    +D+T E        N ++   +++   P  +  G GS+V +SS+      P  S Y   K A+  LTK LA E A  NIR N +AP +IKTS  +         E +    R   I R GEP++ + +V+FLC   ASYITG+ + V
Sbjct:    7 TRRDPLANKVALVTASTDGIGFAIARRLAQDGAHVVVSSRKQQNVDQAVATLQGEGLSVTGTVCHVGKAEDRERLVATAVKL-HGGIDILVSNAAVNPFFGSLMDVTEEVWDKTLDINVKAPALMTKAVVPEMEKRGGGSVVIVSSIAAFSPSPGFSPYNVSKTALLGLTKTLAIELAPRNIRVNCLAPGLIKTSFSRMLWMDKEKEESMKETLR---IRRLGEPEDCAGIVSFLCSEDASYITGETVVV 252          
The following BLAST results are available for this feature:
BLAST of CK934111 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 279
Match NameE-valueIdentityDescription
TRNH_DATST2.657e-8459.85Tropinone reductase homolog OS=Datura stramonium P... [more]
TRNH1_ARATH1.458e-8261.35Tropinone reductase homolog At1g07440 OS=Arabidops... [more]
TRN1_DATST2.750e-8159.44Tropinone reductase 1 OS=Datura stramonium GN=TR1 ... [more]
TRN2_HYONI1.561e-7658.47Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 P... [more]
TRN2_DATST1.012e-7558.06Tropinone reductase 2 OS=Datura stramonium GN=TR2 ... [more]
DHRS4_BOVIN1.024e-3537.20Dehydrogenase/reductase SDR family member 4 OS=Bos... [more]
DHRS4_RABIT1.635e-3336.00Dehydrogenase/reductase SDR family member 4 OS=Ory... [more]
DHRS4_MOUSE2.135e-3337.60Dehydrogenase/reductase SDR family member 4 OS=Mus... [more]
DHRS4_PIG1.059e-3235.74Dehydrogenase/reductase SDR family member 4 OS=Sus... [more]
DHRS4_PONAB6.867e-3236.00Dehydrogenase/reductase SDR family member 4 OS=Pon... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004541_B10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934111 ID=CK934111; Name=CK934111; organism=Citrus sinensis; type=EST; length=842bp
GGGGGAAGACAAGCATGGGAGAACAAGAGCTCATTAGTAGAAGCAAAAGA
TGGTCTCTCAATGGAATGACTGCTTTAGTCACTGGAGGAACCCGAGGCAT
AGGGCATGCTACTGTAGAAGAATTAGCAAGGTTTGGAGCAATTGTTCACA
CATGTTCACGTAATCAAATTGAGCTCGATGCACGTTTACATGAATGGAAA
AACAAAGGGTTCAAAGTAACGGGGTCAGTATGTGACCTGTCATCCCGCGA
ACAGCGTGAGAAGCTAATAGAGACTGTCACCTCCATCTTTCAGGGGAAGC
TCAACATTCTTGTAAACAATGCTGCAATAGTTTTCGTAAAACCAACACTA
GATATTACAGCTGAGGACATGTCAACTGTAAGCAGCACAAATTTCGAGTC
CGTTTTCCATCTGTCTCAACTAGCACATCCTCTGTTTAAAGCATCAGGGA
ATGGAAGTATCGTATTTATTTCCTCTGTTGGGGGCGTTAGAGGAATACCT
TCTGTTTCTCTGTATGGTGCATACAAAGGAGCCATGAATCAACTAACGAA
GAATTTGGCATGCGAGTGGGCAAAGGATAACATCCGTACTAATACAGTTG
CGCCCTGGGTTATTAAAACCTCAATGATCAAACCTTTTGAGGAAGGTCCT
GCAGGAAGTGAATTTCTGGATGGAATAGCACGTCAAACACCCATCGGTCG
AGCTGGAGAGCCTGATGAGGTTTCTTCATTGGTGGCATTCCTTTGCCTTC
CAGCTGCTTCATATATCACAGGGCAGATTATTTGTGTCGATGGAGGGGTG
ACTGTGACTGTGAATGTGAATGGATTACGCTCAACTGGAAAT
back to top