CK934120
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32 Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 LIKLLLIGDSGVGKSCLLLR KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN ++ IR+++ A + + IL+G Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN---NIRNWIRNIEQHASDNVNKILVG 127 HSP 2 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 681 SDIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 ++IRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KG LADEYGIKFFETSA Sbjct: 104 NNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSA 160
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.354e-32 Identity = 78/116 (67.24%), Postives = 86/116 (74.14%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 LIKLLLIGDSGVGKSCLLLR KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN ++ IR+++ A + + IL+G Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFN---NIRNWIRNIEQHASDNVNKILVG 127 HSP 2 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 3 Query: 681 SDIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 ++IRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPT+KG LADEYGIKFFETSA Sbjct: 104 NNIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSA 160
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB8B_DICDI (Ras-related protein Rab-8B OS=Dictyostelium discoideum GN=rab8B PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 2.250e-30 Identity = 69/91 (75.82%), Postives = 71/91 (78.02%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 L+KLLLIGDSGVGKSCLLLR KIRTIEL+GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF S Sbjct: 15 LVKLLLIGDSGVGKSCLLLRFSDGSFTPSFIATIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGS 105 HSP 2 Score: 84.3445 bits (207), Expect = 9.175e-16 Identity = 41/55 (74.55%), Postives = 47/55 (85.45%), Query Frame = 3 Query: 687 IRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 IRNWIRNIEQHASD+VNK+L+GNK DM E K+ V +S+G LADEYGIKF ETSA Sbjct: 106 IRNWIRNIEQHASDSVNKMLIGNKCDMTE-KKVVDSSRGKSLADEYGIKFLETSA 159
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 3.837e-30 Identity = 69/91 (75.82%), Postives = 71/91 (78.02%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 LIKLLLIGDSGVGKSCLLLR KIRTIEL+GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDE SF + Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGN 105 HSP 2 Score: 83.1889 bits (204), Expect = 2.044e-15 Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 3 Query: 684 DIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 +IRNWIRNIEQHA+D+VNK+L+GNK DM E K+ V +S+G LADEYGIKF ETSA Sbjct: 105 NIRNWIRNIEQHATDSVNKMLIGNKCDMAE-KKVVDSSRGKSLADEYGIKFLETSA 159
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 6.545e-30 Identity = 68/91 (74.73%), Postives = 72/91 (79.12%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 LIKLLLIGDSGVGKSCLLLR KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILL+YDVTD+ SF++ Sbjct: 9 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDN 99
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 64/91 (70.33%), Postives = 70/91 (76.92%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNS 430 LIKLLLIGDSGVGKSCLLLR KIRTI++ +R+KLQ+WDTAGQERFRTITTAYYRGAMGILLVYDVTDE SFN+ Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNN 101
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+ ++ IR+++ A D +++G Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFD---NIRNWIRNIEEHASADVEKMILG 120 HSP 2 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 684 DIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 +IRNWIRNIE+HAS +V K+++GNK D+++ KR V +G LA +YGIKF ETSA Sbjct: 98 NIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSA 152
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+ ++ IR+++ A D +++G Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFD---NIRNWIRNIEEHASADVEKMILG 120 HSP 2 Score: 67.781 bits (164), Expect = 8.887e-11 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 684 DIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 +IRNWIRNIE+HAS +V K+++GNK D+++ KR V +G LA +YGIKF ETSA Sbjct: 98 NIRNWIRNIEEHASADVEKMILGNKRDVND-KRQVSKERGEKLALDYGIKFMETSA 152
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+ ++ IR+++ A D +++G Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFD---NIRNWIRNIEEHASADVEKMILG 120 HSP 2 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 684 DIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 +IRNWIRNIE+HAS +V K+++GNK D+++ KR V +G LA +YGIKF ETSA Sbjct: 98 NIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSA 152
BLAST of CK934120 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.612e-28 Identity = 68/116 (58.62%), Postives = 82/116 (70.69%), Query Frame = 2 Query: 158 LIKLLLIGDSGVGKSCLLLRXXXXXXXXXXXXXXXXXXKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNSNCSLHFIIRSLDF*A*VDHSSILIG 505 L KLLLIGDSGVGK+C+L R KIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGI+LVYD+T+E SF+ ++ IR+++ A D +++G Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFD---NIRNWIRNIEEHASADVEKMILG 120 HSP 2 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 684 DIRNWIRNIEQHASDNVNKILVGNKADMDESKRAVPTSKGXXLADEYGIKFFETSA 851 +IRNWIRNIE+HAS +V K+++GNK D+++ KR V +G LA +YGIKF ETSA Sbjct: 98 NIRNWIRNIEEHASADVEKMILGNKCDVND-KRQVSKERGEKLALDYGIKFMETSA 152 The following BLAST results are available for this feature:
BLAST of CK934120 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 330
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934120 ID=CK934120; Name=CK934120; organism=Citrus sinensis; type=EST; length=851bpback to top |