CK934121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SRR35_HUMAN (35 kDa SR repressor protein OS=Homo sapiens GN=SRRP35 PE=1 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.103e-16 Identity = 41/91 (45.05%), Postives = 59/91 (64.84%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAETRKRPEEMRQRHR 515 SL +RN+ RPE+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A +++N K GR+I + A RK P +M+ + R Sbjct: 11 SLFIRNVADATRPEDLRREFGRYGPIVDVYIPLDFYTRRPRGFAYVQFEDVRDAEDALYNLNRKWVCGRQIEIQFAQGDRKTPGQMKSKER 101
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SF13A_MOUSE (Splicing factor, arginine/serine-rich 13A OS=Mus musculus GN=Sfrs13a PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.882e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAETRKRPEEMRQR 509 SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I + A RK P +M+ + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SF13A_HUMAN (Splicing factor, arginine/serine-rich 13A OS=Homo sapiens GN=SFRS13A PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.882e-16 Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAETRKRPEEMRQR 509 SL VRN+ D R E+LR F R+G + DVY+P D+YT PRGFA+VQF D +A +A H+++ K GR+I + A RK P +M+ + Sbjct: 11 SLFVRNVADDTRSEDLRREFGRYGPIVDVYVPLDFYTRRPRGFAYVQFEDVRDAEDALHNLDRKWICGRQIEIQFAQGDRKTPNQMKAK 99
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFR2B_HUMAN (Splicing factor, arginine/serine-rich 2B OS=Homo sapiens GN=SFRS2B PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12 Identity = 61/206 (29.61%), Postives = 85/206 (41.26%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLAAETRKRPEEMRQRHRFXXXXXXXXXXXXXXXXXXXXXXXXXXXPHHPQGXXXXXXXXXXTPVPRQHEDYSISPRRRHIEHPGSP-----RGPPQERGAEYSRRSYSPG-YDDSADRRNPNGNGYGEKSGY 842 +L V N+ P+ LR FE++G V DVY+P++ +T PRGFAFV+F D +A +A+ M+G GRE+ V +A R+ RQ P+G + R + S SPRRRH P R + RG+ YSR YS Y S R+P +S Y Sbjct: 15 TLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDGRELRVQVARYGRRDLPRSRQ--------------------------------GEPRGRSRGGGYGRRS---RSYGRRSRSPRRRHRSRSRGPSCSRSRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRYRESRY 185
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFRS2_RAT (Splicing factor, arginine/serine-rich 2 OS=Rattus norvegicus GN=Sfrs2 PE=1 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 470 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFRS2_PIG (Splicing factor, arginine/serine-rich 2 OS=Sus scrofa GN=SFRS2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 470 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFRS2_PANTR (Splicing factor, arginine/serine-rich 2 OS=Pan troglodytes GN=SFRS2 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 470 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFRS2_MOUSE (Splicing factor, arginine/serine-rich 2 OS=Mus musculus GN=Sfrs2 PE=1 SV=4) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 470 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFRS2_HUMAN (Splicing factor, arginine/serine-rich 2 OS=Homo sapiens GN=SFRS2 PE=1 SV=4) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 470 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90
BLAST of CK934121 vs. ExPASy Swiss-Prot
Match: SFRS2_CHICK (Splicing factor, arginine/serine-rich 2 OS=Gallus gallus GN=SFRS2 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 3.109e-11 Identity = 36/76 (47.37%), Postives = 48/76 (63.16%), Query Frame = 3 Query: 243 SLLVRNIPLDCRPEELRAPFERFGVVRDVYLPKDYYTGEPRGFAFVQFVDPYEAAEAQHHMNGKRFAGREISVVLA 470 SL V N+ P+ LR FE++G V DVY+P+D YT E RGFAFV+F D +A +A M+G GRE+ V +A Sbjct: 15 SLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAMDGAVLDGRELRVQMA 90 The following BLAST results are available for this feature:
BLAST of CK934121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >CK934121 ID=CK934121; Name=CK934121; organism=Citrus sinensis; type=EST; length=861bpback to top |