CK934124

Overview
NameCK934124
Unique NameCK934124
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_ARATH (Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN=At1g60970 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 7.386e-64
Identity = 71/102 (69.61%), Postives = 79/102 (77.45%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688
            FVTGGE+ENELILA+VL+G FDAV LLLR NVDK+EA              +DGGI+LETDANVIAGK   +S D  APLSEQTISQALATAREHLTRSL+K
Sbjct:   76 FVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFDEIIDGGIVLETDANVIAGKAGINSTDPNAPLSEQTISQALATAREHLTRSLMK 177          

HSP 2 Score: 130.954 bits (328), Expect = 7.386e-64
Identity = 61/79 (77.22%), Postives = 69/79 (87.34%), Query Frame = 3
Query:  159 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            M+  P +KNILLLDSEGKRVAVKYYS+DWPTNSA+EAFEK+VFTKTQKTNARTE E+  LE N++VYKFVQDLHF   G
Sbjct:    1 MELPPKVKNILLLDSEGKRVAVKYYSDDWPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNIVVYKFVQDLHFFVTG 79          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ2_ORYSJ (Coatomer subunit zeta-2 OS=Oryza sativa subsp. japonica GN=COPZ2 PE=2 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 6.117e-60
Identity = 70/102 (68.63%), Postives = 79/102 (77.45%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688
            FVT G+DENELI+A VLQGF D+VGLLLRG+V+K+ A              VDGGIILETDAN IAGKVA+++VD  AP SEQTISQALATAREHL RSLLK
Sbjct:   81 FVTAGDDENELIIANVLQGFSDSVGLLLRGDVEKRTALENLDLILLCIDEIVDGGIILETDANTIAGKVATNAVDGSAPFSEQTISQALATAREHLARSLLK 182          

HSP 2 Score: 121.324 bits (303), Expect = 6.117e-60
Identity = 55/76 (72.37%), Postives = 69/76 (90.79%), Query Frame = 3
Query:  156 SMDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHF 383
            S ++CPS+KNILLLDSEGKRVAVKY+S+DW +N++K AFEK+VFTKT KTNAR+EAEI + +G ++VYKFVQDLHF
Sbjct:    5 SKESCPSVKNILLLDSEGKRVAVKYFSDDWSSNASKLAFEKSVFTKTLKTNARSEAEITLFDGYIVVYKFVQDLHF 80          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ2_ARATH (Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN=At3g09800 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.040e-59
Identity = 60/80 (75.00%), Postives = 69/80 (86.25%), Query Frame = 3
Query:  156 SMDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            S D+CP +KNILLLDSEGKRVAVKYYS+DWPTN+AK +FEK VF+KT KTNARTEAEI +L+ N+IVYKF QDLHF   G
Sbjct:    2 SPDSCPLVKNILLLDSEGKRVAVKYYSDDWPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNIIVYKFAQDLHFFVTG 81          

HSP 2 Score: 124.02 bits (310), Expect = 1.040e-59
Identity = 66/101 (65.35%), Postives = 74/101 (73.27%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 685
            FVTGGE+ENELILA+VLQGFFDAV LLLR NV+K EA              VD G++LETD NVIAGKVA  S +    LSEQT++QALATAREHL RSLL
Sbjct:   78 FVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLDEMVDQGVVLETDPNVIAGKVAMQSTEASGSLSEQTLTQALATAREHLARSLL 178          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ3_ARATH (Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN=At4g08520 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.133e-58
Identity = 58/78 (74.36%), Postives = 67/78 (85.90%), Query Frame = 3
Query:  162 DTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            D+CP +KNILLLDSEGKRVAVKYYS+DW TN++K AFEK VF+KT KTNARTEAEI +LE N++VYKF QDLHF   G
Sbjct:    6 DSCPLVKNILLLDSEGKRVAVKYYSDDWATNASKLAFEKYVFSKTSKTNARTEAEITLLESNIVVYKFAQDLHFFVTG 83          

HSP 2 Score: 123.635 bits (309), Expect = 1.133e-58
Identity = 65/101 (64.36%), Postives = 75/101 (74.26%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 685
            FVTGGE+ENEL+L++VLQGFFDAV LLLR NV+K EA              VD G++LETDANVIAGKVA  S +    LSEQT++QALATAREHL RSLL
Sbjct:   80 FVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLDEMVDQGMVLETDANVIAGKVAMQSAEASGSLSEQTLTQALATAREHLARSLL 180          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_ORYSJ (Coatomer subunit zeta-1 OS=Oryza sativa subsp. japonica GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 1.460e-55
Identity = 56/79 (70.89%), Postives = 67/79 (84.81%), Query Frame = 3
Query:  159 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            M++CPS+KNILLLDSEGKRVAVKYY++DWPT SAK AFEK+VF KTQK  A  EAEI M +G+++VYKF+QDLHF   G
Sbjct:    1 MESCPSVKNILLLDSEGKRVAVKYYTDDWPTLSAKLAFEKSVFVKTQKATAGAEAEIVMFDGHIVVYKFIQDLHFFVTG 79          

HSP 2 Score: 115.931 bits (289), Expect = 1.460e-55
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLL 685
            FVTGGE+ENELILA+VLQGF DAV ++LR NVDK+ A              VDGGI+LET+ +VIA KV++H ++    L+EQTI QAL TAREHLT+SLL
Sbjct:   76 FVTGGEEENELILASVLQGFTDAVDIILRNNVDKRTALENLDLILLCLDEIVDGGIVLETEGSVIAEKVSAHGIEGATSLAEQTIVQALTTAREHLTKSLL 176          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ3_ORYSJ (Coatomer subunit zeta-3 OS=Oryza sativa subsp. japonica GN=Os01g0838800 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.001e-50
Identity = 56/79 (70.89%), Postives = 69/79 (87.34%), Query Frame = 3
Query:  159 MDTCPSIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            M++CPS+KNIL+LDSEGKRVAVKYYS+DWP+ S+K+AFEK+VF KTQKT+ARTEAEI M +   +VYKF+QDLHF   G
Sbjct:    1 MESCPSVKNILVLDSEGKRVAVKYYSDDWPSLSSKQAFEKSVFAKTQKTSARTEAEIVMFDSYFVVYKFIQDLHFFVTG 79          

HSP 2 Score: 98.5969 bits (244), Expect = 1.001e-50
Identity = 51/100 (51.00%), Postives = 65/100 (65.00%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSL 682
            FVTGG++ENELILA+VLQGF +A+  LLR  V ++ A              VDGGI+LETDA  I  KV+ H ++    L+EQ +S ALATAREH  RS+
Sbjct:   76 FVTGGDEENELILASVLQGFSEAIDYLLRNKVHRRAALENLDLIFLCLDEVVDGGIVLETDAKAILEKVSGHGLEGSGSLTEQKLSSALATAREHFARSI 175          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_BOVIN (Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.731e-26
Identity = 42/102 (41.18%), Postives = 59/102 (57.84%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688
            +V G   ENEL+L TVL   FD++  +LR NV+K+                VDGG+ILE+D   +  +VA    DV  PL+EQT+SQ L +A+E +  SLL+
Sbjct:   78 YVIGSSYENELMLMTVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177          

HSP 2 Score: 67.3958 bits (163), Expect = 1.731e-26
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F  +G
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_PONAB (Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.468e-26
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688
            +V G   ENEL+L  VL   FD++  +LR NV+K+                VDGG+ILE+D   +  +VA    DV  PL+EQT+SQ L +A+E +  SLL+
Sbjct:   78 YVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177          

HSP 2 Score: 67.3958 bits (163), Expect = 6.468e-26
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F  +G
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_MOUSE (Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.468e-26
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688
            +V G   ENEL+L  VL   FD++  +LR NV+K+                VDGG+ILE+D   +  +VA    DV  PL+EQT+SQ L +A+E +  SLL+
Sbjct:   78 YVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177          

HSP 2 Score: 67.3958 bits (163), Expect = 6.468e-26
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F  +G
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81          
BLAST of CK934124 vs. ExPASy Swiss-Prot
Match: COPZ1_HUMAN (Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.468e-26
Identity = 41/102 (40.20%), Postives = 58/102 (56.86%), Query Frame = 2
Query:  383 FVTGGEDENELILATVLQGFFDAVGLLLRGNVDKKEAXXXXXXXXXXXXXXVDGGIILETDANVIAGKVASHSVDVGAPLSEQTISQALATAREHLTRSLLK 688
            +V G   ENEL+L  VL   FD++  +LR NV+K+                VDGG+ILE+D   +  +VA    DV  PL+EQT+SQ L +A+E +  SLL+
Sbjct:   78 YVIGSSYENELMLMAVLNCLFDSLSQMLRKNVEKRALLENMEGLFLAVDEIVDGGVILESDPQQVVHRVALRGEDV--PLTEQTVSQVLQSAKEQIKWSLLR 177          

HSP 2 Score: 67.3958 bits (163), Expect = 6.468e-26
Identity = 33/74 (44.59%), Postives = 51/74 (68.92%), Query Frame = 3
Query:  174 SIKNILLLDSEGKRVAVKYYSNDWPTNSAKEAFEKAVFTKTQKTNARTEAEIAMLEGNVIVYKFVQDLHFLSLG 395
            ++K IL+LD++G R+  KYY + +P+   ++AFEK +F KT     RT++EIA+LEG  +VYK   DL+F  +G
Sbjct:   12 TVKAILILDNDGDRLFAKYYDDTYPSVKEQKAFEKNIFNKTH----RTDSEIALLEGLTVVYKSSIDLYFYVIG 81          
The following BLAST results are available for this feature:
BLAST of CK934124 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
COPZ1_ARATH7.386e-6469.61Coatomer subunit zeta-1 OS=Arabidopsis thaliana GN... [more]
COPZ2_ORYSJ6.117e-6068.63Coatomer subunit zeta-2 OS=Oryza sativa subsp. jap... [more]
COPZ2_ARATH1.040e-5975.00Coatomer subunit zeta-2 OS=Arabidopsis thaliana GN... [more]
COPZ3_ARATH1.133e-5874.36Coatomer subunit zeta-3 OS=Arabidopsis thaliana GN... [more]
COPZ1_ORYSJ1.460e-5570.89Coatomer subunit zeta-1 OS=Oryza sativa subsp. jap... [more]
COPZ3_ORYSJ1.001e-5070.89Coatomer subunit zeta-3 OS=Oryza sativa subsp. jap... [more]
COPZ1_BOVIN1.731e-2641.18Coatomer subunit zeta-1 OS=Bos taurus GN=COPZ1 PE=... [more]
COPZ1_PONAB6.468e-2640.20Coatomer subunit zeta-1 OS=Pongo abelii GN=COPZ1 P... [more]
COPZ1_MOUSE6.468e-2640.20Coatomer subunit zeta-1 OS=Mus musculus GN=Copz1 P... [more]
COPZ1_HUMAN6.468e-2640.20Coatomer subunit zeta-1 OS=Homo sapiens GN=COPZ1 P... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004541_B03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IIIF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934124 ID=CK934124; Name=CK934124; organism=Citrus sinensis; type=EST; length=847bp
GGGATATTTGAAGACTTAGTATTGTCATGTTGTTCGCTCGGTTAATCAAT
AAACGTCCATTACGTTCTTCTCTGTATTGTAATCTTCCTTGACTCTCGGG
AGTCTCAACGCTCGAAATTAATTGACTGCAGACGACCAAGTTTAATCGAA
CAACAAGCATGGATACTTGTCCGTCCATAAAGAATATCCTTCTCCTGGAT
TCTGAAGGGAAACGTGTAGCAGTCAAGTATTATTCAAACGACTGGCCAAC
CAACAGTGCAAAGGAAGCTTTTGAGAAAGCTGTGTTTACCAAGACCCAGA
AAACAAATGCACGGACCGAAGCGGAGATAGCTATGCTTGAGGGCAACGTT
ATTGTTTACAAGTTTGTTCAAGACCTTCACTTTTTGTCACTGGGGGTGAA
GATGAAAATGAGCTGATCTTAGCCACGGTTCTTCAGGGATTTTTTGATGC
AGTTGGTCTTCTTCTTAGAGGCAATGTGGACAAGAAGGAGGCTCTTGAGA
ACTTGGATCTTATCTTGTTGTGCCTTGATGAAATTGTTGATGGAGGTATC
ATTCTGGAAACTGATGCAAATGTCATTGCTGGAAAGGTTGCAAGCCATAG
TGTGGATGTTGGAGCTCCTTTGTCTGAGCAGACAATTAGTCAAGCATTGG
CTACTGCCCGTGAACATTTAACAAGATCCCTTCTTAAGTGATGATTGCAC
CAGAATAAAAAGGAGAGAGCAGAGTTCTCGTATTTTCTCAGTTTTTACCA
TACATGATTTACCGGTTAATGAGCATCTCCAATTTTGCTTTCTTAATATT
AGTAGATGATGCTGCCATTTGTGCTGTCAGAAGTGTTGTCCCTCGGG
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