CK934156

Overview
NameCK934156
Unique NameCK934156
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig867 contig Csv1_Contig867:310..773. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK934156 vs. ExPASy Swiss-Prot
Match: Y2309_ARATH (Uncharacterized protein At2g23090 OS=Arabidopsis thaliana GN=At2g23090 PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 2.918e-26
Identity = 53/61 (86.89%), Postives = 57/61 (93.44%), Query Frame = 2 
Query:   20 KKQKAANKGSQLETNKKAMSIQCKVCMQTFMCTTSEVKCREHAEAKHPKSDIYACFPHLKK 202
            +K KAA KGSQLE NKKAMSIQCKVCMQTF+CTTSEVKCREHAEAKHPK+D+ ACFPHLKK
Sbjct:   18 EKAKAAGKGSQLEANKKAMSIQCKVCMQTFICTTSEVKCREHAEAKHPKADVVACFPHLKK 78
The following BLAST results are available for this feature:
BLAST of CK934156 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y2309_ARATH2.918e-2686.89Uncharacterized protein At2g23090 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004540_G06 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_G06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934156 ID=CK934156; Name=CK934156; organism=Citrus sinensis; type=EST; length=466bp
GGCTCCCGAATATCGAAAAAAGAAACAAAAAGCTGCCAACAAAGGAAGCC
AATTGGAAACAAACAAGAAAGCTATGTCGATCCAGTGCAAGGTGTGTATG
CAGACATTCATGTGCACGACTTCAGAGGTGAAGTGCAGGGAGCATGCTGA
AGCAAAGCACCCAAAGAGTGACATTTATGCCTGCTTCCCCCATCTTAAGA
AGTGATAAGAGTTTGGGGGAAAATATTATATGCCAGATATAGTTGGGGAC
ATAATCTTCCTTATTGTATAGTGTTCCCTTTTTCCAGCAATACCTCAGAT
TAAGTGTGTTGCGGTTTGTAGAATCTGTTTGTTGCGGTTTGTAGAATCTG
TGTGTGCATGTGAAGAGGGACTGGTTCATTGTTCTGTTTTAATGGAATTT
GTGTAATGTTATGGTAATTGATCTGTTCCTTTTATCCGAAAAAAAAAAAA
AAAAAAAAAAAAAAAA
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