CK934157

Overview
NameCK934157
Unique NameCK934157
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length342
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:413..754. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.133e-51
Identity = 103/113 (91.15%), Postives = 105/113 (92.92%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRA+FYMVMQCLGAICGAGVVKGFM  G Y RL GGANVV  GYTKGDGLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAV
Sbjct:  109 ISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFM-VGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAV 220
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 9.593e-51
Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRA+FYMVMQ LGAICGAGVVKGF G  ++G L GGAN VA GYTKGDGLGAEI+GTF+LVYTVFSATDAKRSARDSHVPILAPLPIGFAV
Sbjct:  111 ISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAV 223
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 197.978 bits (502), Expect = 1.253e-50
Identity = 101/113 (89.38%), Postives = 103/113 (91.15%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRALFY+VMQCLGAICGAGVVKGF   G Y    GGANVVAHGYTKG GLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV
Sbjct:  109 ISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQ-PGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 220
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 2.137e-50
Identity = 100/113 (88.50%), Postives = 102/113 (90.27%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRA+FYM+MQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV
Sbjct:  109 ISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPT-PYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 220
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 2.137e-50
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGANVVA GYTKGDGLGAEI+GTF+LVYTVFSATDAKR+ARDSHVPILAPLPIGFAV
Sbjct:  110 ISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-KGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAV 221
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.791e-50
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAV
Sbjct:  108 ISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAV 219
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 2.791e-50
Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRAL+Y+VMQCLGAICGAGVVKGF    QY  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAV
Sbjct:  108 ISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAV 219
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 3.646e-50
Identity = 100/113 (88.50%), Postives = 102/113 (90.27%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRA+FY+VMQCLGAICGAGVVKGF     Y  L GGAN VAHGYTKG GLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV
Sbjct:  108 ISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQ-PNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 219
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 8.121e-50
Identity = 98/113 (86.73%), Postives = 103/113 (91.15%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRA++Y+VMQCLGAICGAGVVKGF    QY  L GGAN +AHGYTKG GLGAEIIGTFVLVYTVFSATDAKR+ARDSHVPILAPLPIGFAV
Sbjct:  108 ISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPK-QYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAV 219
[Close]
BLAST of CK934157 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.809e-49
Identity = 100/113 (88.50%), Postives = 101/113 (89.38%), Query Frame = 2 
Query:    2 ISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 340
            ISGGHINPAVT GLFLARKLSLTRALFYMVMQCLGAICGAGVVKGF   G Y    GGAN V  GYTKGDGLGAEI+GTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV
Sbjct:  110 ISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQ-EGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 221
The following BLAST results are available for this feature:
BLAST of CK934157 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 82
Match NameE-valueIdentityDescription
PIP1_SOLLC1.133e-5191.15Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP2_PEA9.593e-5187.61Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP15_ARATH1.253e-5089.38Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]
PIP14_ARATH2.137e-5088.50Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP12_ORYSJ2.137e-5088.50Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP11_VICFA2.791e-5088.50Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH2.791e-5088.50Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP13_ARATH3.646e-5088.50Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP12_ARATH8.121e-5086.73Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP15_MAIZE1.809e-4988.50Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_G08 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_G08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934157 ID=CK934157; Name=CK934157; organism=Citrus sinensis; type=EST; length=342bp
CATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCTGTTCTTGG
CGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGATGCAGTGT
CTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATGGGTGCCGG
CCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCATGGCTACA
CCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTGTTCTTGTC
TACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGGGACTCTCA
TGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
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