CK934167

Overview
NameCK934167
Unique NameCK934167
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length630
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6163 contig Csv1_Contig6163:7..637. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_SILLA (Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_PEA (Histone H4 OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_MAIZE (Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_LOLTE (Histone H4 OS=Lolium temulentum PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_FLATR (Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_EUCGL (Histone H4 OS=Eucalyptus globulus PE=3 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_CHEMJ (Histone H4 OS=Chelidonium majus PE=3 SV=3)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H4_ARATH (Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE=1 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H42_WHEAT (Histone H4 variant TH091 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
[Close]
BLAST of CK934167 vs. ExPASy Swiss-Prot
Match: H41_WHEAT (Histone H4 variant TH011 OS=Triticum aestivum PE=3 SV=2)

HSP 1 Score: 149.058 bits (375), Expect = 1.810e-35
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 1 
Query:  169 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 396
            VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT
Sbjct:   22 VLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRT 97
The following BLAST results are available for this feature:
BLAST of CK934167 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 107
Match NameE-valueIdentityDescription
H4_SILLA1.810e-35100.00Histone H4 OS=Silene latifolia GN=SlH4 PE=3 SV=3[more]
H4_PEA1.810e-35100.00Histone H4 OS=Pisum sativum PE=1 SV=2[more]
H4_MAIZE1.810e-35100.00Histone H4 OS=Zea mays GN=H4C7 PE=1 SV=2[more]
H4_LOLTE1.810e-35100.00Histone H4 OS=Lolium temulentum PE=3 SV=2[more]
H4_FLATR1.810e-35100.00Histone H4 OS=Flaveria trinervia GN=hh4 PE=3 SV=3[more]
H4_EUCGL1.810e-35100.00Histone H4 OS=Eucalyptus globulus PE=3 SV=3[more]
H4_CHEMJ1.810e-35100.00Histone H4 OS=Chelidonium majus PE=3 SV=3[more]
H4_ARATH1.810e-35100.00Histone H4 OS=Arabidopsis thaliana GN=At1g07660 PE... [more]
H42_WHEAT1.810e-35100.00Histone H4 variant TH091 OS=Triticum aestivum PE=3... [more]
H41_WHEAT1.810e-35100.00Histone H4 variant TH011 OS=Triticum aestivum PE=3... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934167 ID=CK934167; Name=CK934167; organism=Citrus sinensis; type=EST; length=630bp
GGGGACTACAAAAAAAACGAGCAAAGGTTGAGAGTGGGGGAAAAAAGAAA
GAAAAATTCCCAATTAGTTTGAAAACCGTAATTAGCATTTTAATTTCGTA
GCAGAATGTCTGGACGCGGCAAGGGAGGCAAGGGATTGGGGAAGGGAGGA
GCCAAGAGGCATCGCAAGGTGTTGCGTGATAACATTCAGGGCATCACCAA
GCCGGCTATTCGCCGTTTGGCCAGAAGAGGAGGCGTTAAGAGAATCAGCG
GTCTCATCTACGAGGAGACACGCGGCGTCCTCAAGATCTTTTTGGAGAAC
GTCATTCGCGATGCTGTGACCTACACTGAGCACGCTCGCCGAAAGACGGT
GACCGCCATGGATGTCGTTTATGCGCTCAAGAGGCAGGGCAGGACTCTCT
ATGGGTTTGGTGGTTGATGTGGCGTCGTTTTGTATTTTGTGTTTTAGGGT
TTTCCTTTTTTCCTGTAAATCAGTGAACGTGGTTGTGTCTAGCGAGTGGG
TTTAAATTGGAGGCAACTTGTATTTGCCGTTTCCTAGGGGTTTTTATTTT
TTTGGTTCATTGGTGTTTTCATCTTTTGCAATGAGAATCTAGTTGTTTGC
CAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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