CK934179

Overview
NameCK934179
Unique NameCK934179
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length540
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13796 contig Csv1_Contig13796:50..588. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER42_ARATH (Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 1.655e-68
Identity = 65/81 (80.25%), Postives = 75/81 (92.59%), Query Frame = 1
Query:  298 DRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            DRSFG+RNFRYIE IKEA+ERECPGVVSC+DILVLS R+G+ A+GGPYIPLKTGRRDG KSR ++LE YLPDHN+S+SVVL
Sbjct:   97 DRSFGLRNFRYIEEIKEALERECPGVVSCSDILVLSAREGIEAVGGPYIPLKTGRRDGLKSRTDMLESYLPDHNESISVVL 177          

HSP 2 Score: 139.428 bits (350), Expect = 1.655e-68
Identity = 63/71 (88.73%), Postives = 68/71 (95.77%), Query Frame = 3
Query:   84 EEDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEH 296
            E +PGL+MNFYKDTCPQAEDI+REQVKLLYKRHKNTAFSWLRNIFHDCAV+SCDASLLLDSTR+ L EKEH
Sbjct:   26 EAEPGLMMNFYKDTCPQAEDIVREQVKLLYKRHKNTAFSWLRNIFHDCAVESCDASLLLDSTRRELGEKEH 96          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER21_ARATH (Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.755e-42
Identity = 48/81 (59.26%), Postives = 62/81 (76.54%), Query Frame = 1
Query:  301 RSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIP-LKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            RSFGMRNF+Y++ IK+A+E+ECP  VSCADI+ LS RDG+V L GP I  +KTGRRD R S    +E  +P+HNDS+S V+
Sbjct:   97 RSFGMRNFKYVKIIKDALEKECPSTVSCADIVALSARDGIVMLKGPKIEMIKTGRRDSRGSYLGDVETLIPNHNDSLSSVI 177          

HSP 2 Score: 94.3597 bits (233), Expect = 1.755e-42
Identity = 41/65 (63.08%), Postives = 55/65 (84.62%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            L MN+YK++CP+AE+IIR+QV+ LY +H NTA SWLRN+FHDC V+SCDASLLL++ R   SE++
Sbjct:   30 LEMNYYKESCPKAEEIIRQQVETLYYKHGNTAVSWLRNLFHDCVVKSCDASLLLETARGVESEQK 94          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER48_ARATH (Putative Peroxidase 48 OS=Arabidopsis thaliana GN=PER48 PE=2 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 3.046e-24
Identity = 33/79 (41.77%), Postives = 52/79 (65.82%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +  ++ F  I+ +K  +E  CPGVVSCAD+LVL+ R+ V+  GGP+ PL+TGR+D   +  +  E  LP  + ++SV+L
Sbjct:  136 NLSLKGFDVIDAVKSELENVCPGVVSCADLLVLAAREAVLVAGGPFYPLETGRKDSAAAYRDFAEHELPAPDATLSVIL 214          

HSP 2 Score: 56.9954 bits (136), Expect = 3.046e-24
Identity = 25/67 (37.31%), Postives = 42/67 (62.69%), Query Frame = 3
Query:  108 NFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHGQEL 308
            ++Y+++CP AE II + ++ +Y    + A   +R +FHDC ++ CDAS+LLD+     SEK+    L
Sbjct:   71 DYYRESCPTAEKIIAKAIRDIYNVTPSVAPPIIRLLFHDCFIEGCDASVLLDADEAHTSEKDASPNL 137          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.263e-23
Identity = 28/62 (45.16%), Postives = 41/62 (66.13%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAE 489
            +  +R +  I++ KE +E  CPGVVSCADI+ ++ RD V   GGPY  +  GR DG++S+ E
Sbjct:   94 NLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKGRFDGKRSKIE 155          

HSP 2 Score: 61.2326 bits (147), Expect = 4.263e-23
Identity = 27/66 (40.91%), Postives = 40/66 (60.61%), Query Frame = 3
Query:   96 GLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            GL M +Y  +CP AE I++  V    +     A   +R +FHDC ++ CDAS+LLDST+   +EK+
Sbjct:   25 GLSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKD 90          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER11_ARATH (Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.207e-23
Identity = 26/76 (34.21%), Postives = 46/76 (60.53%), Query Frame = 1
Query:  313 MRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            ++ ++ ++ IK  +E ECPGVVSCAD+L +  RD  + +GGPY  +  GR+D + +  E+    LP   + +  ++
Sbjct:  102 LKGYKIVDRIKNIIESECPGVVSCADLLTIGARDATILVGGPYWDVPVGRKDSKTASYELATTNLPTPEEGLISII 177          

HSP 2 Score: 60.077 bits (144), Expect = 7.207e-23
Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 3
Query:   87 EDPGLVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKE 293
            +D  L +++YK TCP   D+I+++++ + K     A   +R  FHDC VQ CD S+LLD T     EK+
Sbjct:   26 KDLPLTLDYYKSTCPTVFDVIKKEMECIVKEDPRNAAIIIRLHFHDCFVQGCDGSVLLDETETLQGEKK 94          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER28_ARATH (Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 7.214e-23
Identity = 32/69 (46.38%), Postives = 42/69 (60.87%), Query Frame = 1
Query:  304 SFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            +F +R F  I+ IK A+E +CP  VSC+DI+ L+ RD V   GGP   + TGRRDG  S  E   + LP
Sbjct:   91 NFSVRGFELIDEIKTALEAQCPSTVSCSDIVTLATRDAVFLGGGPSYVVPTGRRDGFVSNPEDANEILP 159          

HSP 2 Score: 62.003 bits (149), Expect = 7.214e-23
Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEKEHG 299
            L   FY ++CP AE I+   V+  + R  +   +  R  FHDC VQ CDASLL+D T   LSEK  G
Sbjct:   23 LKFKFYSESCPNAETIVENLVRQQFARDPSITAALTRMHFHDCFVQGCDASLLIDPTTSQLSEKNAG 89          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER52_ARATH (Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.221e-22
Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 1
Query:  316 RNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            R F  I+NIK AVE+ CPGVVSCADIL ++ RD VVALGGP   +K GRRD R +        +P    S+S ++
Sbjct:  103 RGFNVIDNIKSAVEKACPGVVSCADILAIAARDSVVALGGPNWNVKVGRRDARTASQAAANSNIPAPTSSLSQLI 177          

HSP 2 Score: 48.9062 bits (115), Expect = 1.221e-22
Identity = 24/64 (37.50%), Postives = 29/64 (45.31%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L  NFY  +CP     ++  VK           S LR  FHDC V  CD S+LLD T     E+
Sbjct:   30 LTTNFYSTSCPNLLSTVQTAVKSAVNSEARMGASILRLFFHDCFVNGCDGSILLDDTSSFTGEQ 93          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER17_ARATH (Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 3.498e-22
Identity = 27/73 (36.99%), Postives = 45/73 (61.64%), Query Frame = 1
Query:  292 SMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLP 510
            S+     +R+F  +++IKEA+E+ CP  VSCADI++++ RD V   GGP   +K GR+D   +  +  +  +P
Sbjct:   88 SLSNIDSLRSFEVVDDIKEALEKACPATVSCADIVIMAARDAVALTGGPDWEVKLGRKDSLTASQQDSDDIMP 160          

HSP 2 Score: 62.3882 bits (150), Expect = 3.498e-22
Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 3
Query:  111 FYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            FY +TCP+AE I+R ++K    +   +  S +R  FHDC V  CDASLLLD T   L EK
Sbjct:   27 FYSETCPEAESIVRREMKKAMIKEARSVASVMRFQFHDCFVNGCDASLLLDDTPNMLGEK 86          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER18_ARATH (Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.002e-21
Identity = 37/66 (56.06%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  289 RSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRA 486
            RS   +  +  F  IE++K  +E  CPG VSCADILVL+ RD V ALGGP +P+ TGRRDGR S A
Sbjct:   91 RSDPGNASLGGFAVIESVKNILEIFCPGTVSCADILVLAARDAVEALGGPVVPIPTGRRDGRVSMA 156          

HSP 2 Score: 48.9062 bits (115), Expect = 1.002e-21
Identity = 24/54 (44.44%), Postives = 30/54 (55.56%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLL 260
            L  NFY  +CP AE I+R  V+       +     LR IFHDC VQ CD S+L+
Sbjct:   31 LSFNFYAGSCPGAELIVRNTVRSASSSDPSVLGKLLRLIFHDCFVQGCDGSVLI 84          
BLAST of CK934179 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.303e-21
Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = 1
Query:  286 RRSMDRSFGMRNFRYIENIKEAVERECPGVVSCADILVLSGRDGVVALGGPYIPLKTGRRDGRKSRAEILEQYLPDHNDSMSVVL 540
            +RS       R F  IE IK A+E+ECP  VSCADIL L+ RD  V  GGP   +  GRRD R +        +P  N++   +L
Sbjct:   96 KRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTIL 180          

HSP 2 Score: 56.6102 bits (135), Expect = 1.303e-21
Identity = 27/64 (42.19%), Postives = 39/64 (60.94%), Query Frame = 3
Query:   99 LVMNFYKDTCPQAEDIIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRKTLSEK 290
            L   FY  +CP+A++I++  V   ++       S LR  FHDC V+ CDAS+LLDS+   +SEK
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEK 96          
The following BLAST results are available for this feature:
BLAST of CK934179 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 90
Match NameE-valueIdentityDescription
PER42_ARATH1.655e-6880.25Peroxidase 42 OS=Arabidopsis thaliana GN=PER42 PE=... [more]
PER21_ARATH1.755e-4259.26Peroxidase 21 OS=Arabidopsis thaliana GN=PER21 PE=... [more]
PER48_ARATH3.046e-2441.77Putative Peroxidase 48 OS=Arabidopsis thaliana GN=... [more]
PER47_ARATH4.263e-2345.16Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER11_ARATH7.207e-2334.21Peroxidase 11 OS=Arabidopsis thaliana GN=PER11 PE=... [more]
PER28_ARATH7.214e-2346.38Peroxidase 28 OS=Arabidopsis thaliana GN=PER28 PE=... [more]
PER52_ARATH1.221e-2250.67Peroxidase 52 OS=Arabidopsis thaliana GN=PER52 PE=... [more]
PER17_ARATH3.498e-2236.99Peroxidase 17 OS=Arabidopsis thaliana GN=PER17 PE=... [more]
PER18_ARATH1.002e-2156.06Peroxidase 18 OS=Arabidopsis thaliana GN=PER18 PE=... [more]
PER72_ARATH1.303e-2141.18Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_C10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_C10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934179 ID=CK934179; Name=CK934179; organism=Citrus sinensis; type=EST; length=540bp
AAATGGGTANTAAAGCTGTCTTCTTGCTTTTAGCTTTGCTTTCCTTCTCA
GCTGTGTCTCTGAGGTCTGCTTTGGAAGAAAATGAAGAGGACCCAGGTCT
TGTTATGAATTTTTACAAGGATACCTGCCCTCAGGCCGAGGACATTATCA
GGGAACAAGTTAAGCTTCTGTACAAGCGCCACAAGAACACTGCATTTTCT
TGGCTTAGAAACATTTTCCATGACTGTGCTGTCCAGTCTTGTGATGCTTC
ACTGCTTCTGGACTCGACAAGAAAGACCTTGTCTGAGAAGGAGCATGGAC
AGGAGCTTTGGTATGAGGAACTTCAGGTACATTGAGAACATCAAAGAAGC
TGTTGAAAGAGAGTGCCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTCC
TGTCCGGCAGAGATGGCGTTGTTGCGCTTGGAGGCCCTTACATTCCTCTC
AAGACAGGAAGAAGAGATGGTAGAAAAAGCAGAGCAGAGATACTTGAGCA
GTATCTCCCAGATCACAATGACAGCATGTCTGTTGTTCTT
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