CK934209

Overview
NameCK934209
Unique NameCK934209
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length604
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:608..1208. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI_PHAVU (Ferritin, chloroplastic OS=Phaseolus vulgaris GN=PFE PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.238e-30
Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 243
            AMELALSLEKL NEKL S+ SVADRN DPQ+ DF+ESEFL EQVEAI KI++YV+QLRMVGKGHGVWHFDQ LLH+G AA
Sbjct:  175 AMELALSLEKLVNEKLRSVHSVADRNKDPQLADFIESEFLSEQVEAIKKISEYVAQLRMVGKGHGVWHFDQSLLHDGHAA 254          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 3.602e-30
Identity = 64/80 (80.00%), Postives = 71/80 (88.75%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGDAA 243
            AMELALSLEKLTNEKLL+L SVA +NND Q+ DF+ESEFLGEQVEAI KI++YV+QLR VGKGHGVWHFDQMLLHE   A
Sbjct:  176 AMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVA 255          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 3.049e-29
Identity = 64/81 (79.01%), Postives = 73/81 (90.12%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE-GDAA 243
            AMELALSLEKLTNEKLL+L SVA +N D Q+ DFVE+E+LGEQVEAI +I++YV+QLR VGKGHGVWHFDQMLLHE GDAA
Sbjct:  167 AMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHEGGDAA 247          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI3_VIGUN (Ferritin-3, chloroplastic OS=Vigna unguiculata PE=2 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 3.983e-29
Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHE 231
            AMELALSLEKLTNEKLL + SVADRNND Q+ DF+ESEFL EQVE+I KIA+YV+QLR+VGKGHGVWHFDQ LLH+
Sbjct:  181 AMELALSLEKLTNEKLLYVHSVADRNNDAQLADFIESEFLNEQVESIKKIAEYVTQLRLVGKGHGVWHFDQRLLHD 256          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 3.983e-29
Identity = 62/77 (80.52%), Postives = 69/77 (89.61%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEG 234
            AMELALSLEKLTNEKLL L SVA +N D Q+ DFVESEFLGEQVE+I +I++YV+QLR VGKGHGVWHFDQMLLHEG
Sbjct:  170 AMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVAQLRRVGKGHGVWHFDQMLLHEG 246          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 5.201e-29
Identity = 61/78 (78.21%), Postives = 70/78 (89.74%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLHEGD 237
            AMELALSLEKLTNEKLL + SVA+RNNDPQ  DF+ESEFL EQV++I KIA+YV+QLR+VGKGHGVWHFDQ LLH+ D
Sbjct:  178 AMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVKSIKKIAEYVAQLRLVGKGHGVWHFDQKLLHDED 255          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI1_ARATH (Ferritin-1, chloroplastic OS=Arabidopsis thaliana GN=FER1 PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 6.793e-29
Identity = 59/75 (78.67%), Postives = 68/75 (90.67%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 228
            AMELALSLEKLTNEKLL++  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ Y++QLRM+GKGHGVWHFDQMLL+
Sbjct:  181 AMELALSLEKLTNEKLLNVHKVASENNDPQLADFVESEFLGEQIEAIKKISDYITQLRMIGKGHGVWHFDQMLLN 255          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 8.872e-29
Identity = 60/75 (80.00%), Postives = 68/75 (90.67%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLLH 228
            AMELALSLEKLTNEKLL+L  VA  NNDPQ+ DFVESEFLGEQ+EAI KI+ +++QLRMVGKGHGVWHFDQMLL+
Sbjct:  180 AMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFITQLRMVGKGHGVWHFDQMLLN 254          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI_MALXI (Ferritin, chloroplastic OS=Malus xiaojinensis PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.581e-28
Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 225
            AMELALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QLR VGKGHGVWHFDQ LL
Sbjct:  176 AMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
BLAST of CK934209 vs. ExPASy Swiss-Prot
Match: FRI1_SOYBN (Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 2.581e-28
Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 1
Query:    4 AMELALSLEKLTNEKLLSLRSVADRNNDPQMGDFVESEFLGEQVEAINKIAKYVSQLRMVGKGHGVWHFDQMLL 225
            AMELALSLEKL NEKLL++ SVADRNNDPQM DF+ESEFL EQVE+I KI++YV+QLR VGKGHGVWHFDQ LL
Sbjct:  176 AMELALSLEKLVNEKLLNVHSVADRNNDPQMADFIESEFLSEQVESIKKISEYVAQLRRVGKGHGVWHFDQRLL 249          
The following BLAST results are available for this feature:
BLAST of CK934209 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
FRI_PHAVU1.238e-3080.00Ferritin, chloroplastic OS=Phaseolus vulgaris GN=P... [more]
FRI3_SOYBN3.602e-3080.00Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI4_SOYBN3.049e-2979.01Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI3_VIGUN3.983e-2980.26Ferritin-3, chloroplastic OS=Vigna unguiculata PE=... [more]
FRI2_VIGUN3.983e-2980.52Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI2_SOYBN5.201e-2978.21Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_ARATH6.793e-2978.67Ferritin-1, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_BRANA8.872e-2980.00Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]
FRI_MALXI2.581e-2881.08Ferritin, chloroplastic OS=Malus xiaojinensis PE=3... [more]
FRI1_SOYBN2.581e-2881.08Ferritin-1, chloroplastic OS=Glycine max PE=1 SV=4[more]

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Properties
Property NameValue
Genbank descriptionCGF1004540_B07 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10001_IF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934209 ID=CK934209; Name=CK934209; organism=Citrus sinensis; type=EST; length=604bp
GGGGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACAAACGAGAAGCT
TCTGAGCCTGCGCAGTGTGGCGGATAGAAACAATGATCCCCAAATGGGAG
ATTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAAGCAATTAACAAG
ATCGCTAAATATGTTTCTCAACTTAGGATGGTTGGGAAAGGCCACGGAGT
ATGGCACTTCGATCAAATGCTTCTCCACGAGGGTGATGCTGCATGATGAA
GAACCATATTGTTACATTTCTTTGTGGTTTAGTCAACTCTTTGCTGCTAA
ACGTTCTGAAGTATCTCTGCCACAGGAGGTTGAATGTGTTGTCAAAAAAT
AAGCTGAAACAGTGATAAGTCCTACAAAGTCAATACTCAATAGCCTCCTT
GCTTTATCATATTAGTGTGGTCGCTTTTAGATAGTCTTTTTTATGGTGCT
TTTTCTTTATTTAGTAACAGACAGTGTGAAGGGATCTAATAGTTTAAGCA
GAGCGCCAAATCCATCTTCTGATTGTATAAATATAATTAAGTTGTTCAAT
AAAAGTTCTGTTTCTGCCCTGGATAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA
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