CK934225
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK934225 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.948e-39 Identity = 72/118 (61.02%), Postives = 85/118 (72.03%), Query Frame = 1 Query: 79 MASKLSVVAFSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 432 MA K+S+V F VL+ +FL +N V E + N+ YG ++G L PQ+C P+CT RCSKT Y+KPC+FFCQKCCAKCLCVPAG YGNKQSCPCYNNWKTKRGGPKCP Sbjct: 1 MAGKMSIVLF--VLLVVFLTQNQ----VSRANIMRDEQQQQQRNNQLYGVSEGRLHPQDCQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CK934225 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 2.639e-28 Identity = 48/64 (75.00%), Postives = 54/64 (84.38%), Query Frame = 1 Query: 241 LQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 432 L+P +C PRCT RCS T ++KPC+FFCQKCCA CLCVP G YGNKQSCPCYNNWKT+ G PKCP Sbjct: 33 LRPTDCKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CK934225 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 119.398 bits (298), Expect = 1.448e-26 Identity = 55/109 (50.46%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 106 FSLVLIFLFLVENHATSIVEAPTPQPAESSGRNGNHSTYGTTQGSLQPQECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 432 F L LI LF+++ + SSG N S GSL+ +C C RC KTQY K C+ FC KCC KCLCVP G+YGNKQ C CYNNWKT+ GGPKCP Sbjct: 9 FLLTLIVLFMLQTMVMA-----------SSGSNVKWSQKRYGPGSLKRTQCPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106
BLAST of CK934225 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13 Identity = 29/59 (49.15%), Postives = 35/59 (59.32%), Query Frame = 1 Query: 256 CGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 432 C +C RCSK CL +C CC +C CVP+G YGNK CPCY + K +G KCP Sbjct: 30 CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of CK934225 vs. ExPASy Swiss-Prot
Match: GASA2_ARATH (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana GN=GASA2 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.651e-12 Identity = 30/60 (50.00%), Postives = 35/60 (58.33%), Query Frame = 1 Query: 253 ECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 432 +CG RC RCSK+ K CL C CC++C CVP G GN CPCY + T G KCP Sbjct: 40 DCGGRCKDRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLCPCYASITTHGGRLKCP 99
BLAST of CK934225 vs. ExPASy Swiss-Prot
Match: GASA3_ARATH (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana GN=GASA3 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.718e-11 Identity = 29/60 (48.33%), Postives = 34/60 (56.67%), Query Frame = 1 Query: 253 ECGPRCTTRCSKTQYRKPCLFFCQKCCAKCLCVPAGFYGNKQSCPCYNNWKTKRGGPKCP 432 +CG RC RCSK+ CL C CC +C CVP G GN CPCY + T+ G KCP Sbjct: 40 DCGGRCKGRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLCPCYASITTRGGRLKCP 99 The following BLAST results are available for this feature:
BLAST of CK934225 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934225 ID=CK934225; Name=CK934225; organism=Citrus sinensis; type=EST; length=609bpback to top |