CK934264

Overview
NameCK934264
Unique NameCK934264
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length740
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2B15_ARATH (F-box protein PP2-B15 OS=Arabidopsis thaliana GN=PP2B15 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.596e-47
Identity = 99/190 (52.11%), Postives = 121/190 (63.68%), Query Frame = 1
Query:   91 VLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSP-LAFSSKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASKGKAYL 657
            +LPE CVAT+ S T P D             A DSD +W+KFLP+D+  ++S+S  P   FSSKKEL+  LC   LID G+  FK+EK SGK SYILS+R LSITWS    YWSW    +SRFSE   L  ++WLEI GKI+T  LS NT YGAYLIMK++ RAYGLD   AE SI++G  +      YL
Sbjct:    1 MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRIFSSKKELYRCLCESILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWSPRSDSRFSEGVQLIMTDWLEIIGKIQTGALSPNTNYGAYLIMKVTSRAYGLDLVPAETSIKVGNGEKKIKSTYL 190          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2B14_ARATH (F-box protein PP2-B14 OS=Arabidopsis thaliana GN=PP2B14 PE=2 SV=1)

HSP 1 Score: 172.17 bits (435), Expect = 2.667e-42
Identity = 92/190 (48.42%), Postives = 121/190 (63.68%), Query Frame = 1
Query:   91 VLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSP-LAFSSKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASKGKAYL 657
            +LPE C+A + + T P DA            A DSD +W+KFLPSD+  ++S+S       SSKKE++  LC   LID  +  FK+ K SGK SY+LSAR +SIT S +  YWSW ++ +SRFSE A L  ++ LEIEGKI+T++LS NT YGAYLI+K++  AYGLD   AE SI+    Q SK   YL
Sbjct:    3 MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNISSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWSNVSDSRFSESAELIITDRLEIEGKIQTRVLSANTRYGAYLIVKVTKGAYGLDLVPAETSIKSKNGQISKSATYL 192          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: FB95_ARATH (F-box protein At2g02240 OS=Arabidopsis thaliana GN=At2g02240 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.013e-41
Identity = 85/191 (44.50%), Postives = 120/191 (62.83%), Query Frame = 1
Query:   85 FNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCH-PFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASKGKAY 654
            F+VLPE+C++ + S T P DAC           A+ SD +WDKFLP ++  +VS+S     F+SKKEL+  LCH P LI+ GK SF LEK+SGK+  +LS++ L ITW S+P YW W+S+ ESRF+++A L    W EI GK   ++LS  T Y AY++ K  DR  GL     E+ + + G+++SK   Y
Sbjct:   61 FDVLPEDCISNIISFTSPRDACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRS---RVFASKKELYFALCHNPVLIEDGKKSFWLEKASGKRCIMLSSKELWITWGSSPEYWQWISIPESRFNKIAELLDVCWFEIRGKTSARVLSPGTRYSAYIVFKTKDRCPGLGHLPVEVGLGLVGQESSKRFIY 248          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.729e-41
Identity = 92/190 (48.42%), Postives = 122/190 (64.21%), Query Frame = 1
Query:   91 VLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSP-LAFSSKKELFALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASKGKAYL 657
            +LPE CVA + + T P DA            A DSD +W+KFLPS +  ++S+S      FSSKKE++  LC   LID  +  FK+ K SGK SYILSAR +SIT+S +  Y SW ++ +SRFSE A L T++ LEI+GKI+T +LS NT YGAYLIMK+++ AYGLD   AE S++    Q +K   YL
Sbjct:    3 MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRIFSSKKEIYRCLCDSLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWSNVSDSRFSESAELITTDRLEIKGKIQTTVLSPNTKYGAYLIMKVTNGAYGLDLVPAETSVKSKNGQNNKNTTYL 192          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2B10_ARATH (F-box protein PP2-B10 OS=Arabidopsis thaliana GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.160e-37
Identity = 80/187 (42.78%), Postives = 112/187 (59.89%), Query Frame = 1
Query:   85 FNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCH-PFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASK 642
            F+  PE+C++ + S T P DAC            + SDIIW+KFLP+D+  ++  S     FSSKKEL+  LC+ P L D  K S  LEK+SGK+  +LSA  LSI W  NP YW W+ + ESRF +VA LR   W EI G+  T++LS  T Y AY++ K  D+ YG  + A E ++ + G++ S+
Sbjct:   14 FDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPS---RVFSSKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIWGDNPQYWQWIPIPESRFEKVAKLRDVCWFEIRGRTNTRVLSPRTRYSAYIVFKGVDKCYGFQNVAIEAAVGVVGQEPSR 197          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B1_ARATH (F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP2B1 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 7.516e-37
Identity = 81/202 (40.10%), Postives = 118/202 (58.42%), Query Frame = 1
Query:   85 FNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLC-HPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISD-RAYGLDSEAAEISIEIGGRQASKGKAYLGSKQKSNSS 684
            F+ LPE+C++ V S T P DAC           A  SD++W+ FLPS++  +V +S + L   SKKE+F  L  +  L++ GK SF +EK+SGKK Y+LSA  L+I W  +P YW W+++ ES+F +VA LR   W E+ GKI   MLS+ T Y  Y++ K ++ R+YG D    E  +   G+ A+K   Y  S    + S
Sbjct:   32 FDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQSANHL---SKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAYWKWITVPESKFEKVAELRNVCWFEVRGKISCGMLSKGTHYSVYVVFKTANGRSYGFDLVPVEAGVGFVGKVATKKSVYFESGNADSRS 230          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2B12_ARATH (Putative F-box protein PP2-B12 OS=Arabidopsis thaliana GN=PP2B12 PE=4 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 8.310e-36
Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 1
Query:   94 LPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCH-PFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDR-AYGLDSEAAEIS 612
            LPEEC+AT+ S T P DACR          A DS+  W++FLPSD+   +  S+S     S K+LF   C  P LI+ G+ SF +EK SGKK ++LSAR L I W  +P +W WVS+ +SRF EVA L    W EI GKI T +LS+ T Y AYL+ K  +  ++G +S   E+S
Sbjct:    6 LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRF---SNKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVSIPDSRFEEVAGLLMVCWFEIRGKISTSLLSKATNYSAYLVFKEQEMGSFGFESLPLEVS 177          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B2_ARATH (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana GN=PP2B2 PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 7.035e-35
Identity = 77/192 (40.10%), Postives = 113/192 (58.85%), Query Frame = 1
Query:   85 FNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLC-HPFLIDAGKISFKLEKSSGKKSYILSAR-ALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASKGKAY 654
            F+ LPE+C++ + S T P DAC           A++SD +WDKFLPSD+  +V  S     FSSKKEL+  +C +P L++ G  SF LEK +GKK ++LS + ++ ITW S P YW W+S+ E+RF EV  L    W E+ G + TK LS  T Y AY++ K  +    L     E ++ + G+++S+   Y
Sbjct:   42 FDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLVPPS---RVFSSKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQYWRWISIPEARFEEVPELLNVCWFEVRGGMNTKELSPGTRYSAYIVFKTKNGCPNLGDVPVEATVGLVGQESSQRHIY 230          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.956e-33
Identity = 71/167 (42.51%), Postives = 101/167 (60.48%), Query Frame = 1
Query:   88 NVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELF-ALLCHPFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYG 585
            N LPE+C+A + SLT PLD CR          A  SD +W+ FLP+D+P   +   +P    ++K+LF +L+ +P LI+   +SF LE+ SG K Y+++ARAL+I W     YW W+S+  +RF EVA L    WLEI GKI   +LS +T+Y AY + K +   YG
Sbjct:    2 NNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWNHFLPADFP---AGFAAPAGLPTRKQLFFSLVDNPLLINGTLLSFSLERKSGNKCYMMAARALNIVWGHEQRYWHWISLPNTRFGEVAELIMVWWLEITGKINITLLSDDTLYAAYFVFKWNHSPYG 165          
BLAST of CK934264 vs. ExPASy Swiss-Prot
Match: PP2B6_ARATH (Putative F-box protein PP2-B6 OS=Arabidopsis thaliana GN=PP2B6 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.373e-30
Identity = 68/187 (36.36%), Postives = 106/187 (56.68%), Query Frame = 1
Query:   85 FNVLPEECVATVFSLTCPLDACRXXXXXXXXXXAMDSDIIWDKFLPSDWPEIVSKSVSPLAFSSKKELFALLCH-PFLIDAGKISFKLEKSSGKKSYILSARALSITWSSNPIYWSWVSMQESRFSEVAVLRTSNWLEIEGKIKTKMLSQNTMYGAYLIMKISDRAYGLDSEAAEISIEIGGRQASK 642
            F+ LPE+C++ + S T P D C           A+  D IW+KFLPS++  ++        FSSKK+L+  LC+ P L++ GK SF LE +SGKK  +L+A+ L IT  +NP YW W+ + ES F +V  L  +   ++ G + T++LS  T Y  Y++ KI D  +GL     ++ +   G++  K
Sbjct:   45 FDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPPW---RVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEYWQWIELCESSFEKVPELLNNRSFQMGGSMSTQILSLGTHYSVYIVYKIKDERHGLRDLPIQVGVGFKGQEMPK 228          
The following BLAST results are available for this feature:
BLAST of CK934264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
P2B15_ARATH3.596e-4752.11F-box protein PP2-B15 OS=Arabidopsis thaliana GN=P... [more]
P2B14_ARATH2.667e-4248.42F-box protein PP2-B14 OS=Arabidopsis thaliana GN=P... [more]
FB95_ARATH1.013e-4144.50F-box protein At2g02240 OS=Arabidopsis thaliana GN... [more]
P2B13_ARATH1.729e-4148.42F-box protein PP2-B13 OS=Arabidopsis thaliana GN=P... [more]
P2B10_ARATH1.160e-3742.78F-box protein PP2-B10 OS=Arabidopsis thaliana GN=P... [more]
PP2B1_ARATH7.516e-3740.10F-box protein PP2-B1 OS=Arabidopsis thaliana GN=PP... [more]
P2B12_ARATH8.310e-3645.71Putative F-box protein PP2-B12 OS=Arabidopsis thal... [more]
PP2B2_ARATH7.035e-3540.10Putative F-box protein PP2-B2 OS=Arabidopsis thali... [more]
P2B11_ARATH2.956e-3342.51F-box protein PP2-B11 OS=Arabidopsis thaliana GN=P... [more]
PP2B6_ARATH1.373e-3036.36Putative F-box protein PP2-B6 OS=Arabidopsis thali... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004261_C04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IVF_C04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934264 ID=CK934264; Name=CK934264; organism=Citrus sinensis; type=EST; length=740bp
GGGGAGGGACTCTGATGAACAAAGAATTAAAGCTATACGTATTTCTGAAA
AACAATGGAAGCGAATTTCGATACCAATTGCTACTTCAACGTGTTGCCAG
AAGAGTGCGTTGCCACTGTTTTCTCCCTCACTTGTCCGTTAGATGCATGC
AGATCATCGCTTGTTTCTTCTTCGTTTCGATCGGCCATGGACTCCGACAT
TATCTGGGACAAGTTCTTGCCCTCAGATTGGCCCGAGATCGTCTCCAAAT
CAGTCTCTCCCCTCGCATTTTCCTCCAAGAAAGAGCTCTTCGCTCTCCTT
TGCCACCCTTTTCTCATTGATGCCGGCAAGATCAGCTTCAAGTTAGAGAA
ATCATCAGGCAAAAAATCTTATATTTTGTCTGCTAGAGCTCTTAGTATAA
CGTGGAGTAGCAATCCAATTTATTGGAGCTGGGTGTCCATGCAGGAATCA
AGATTTTCAGAAGTTGCGGTGCTGAGAACATCAAATTGGCTGGAAATTGA
AGGCAAGATCAAGACCAAAATGTTGTCACAAAACACGATGTATGGAGCTT
ATCTTATAATGAAAATAAGTGATAGAGCATACGGGCTTGATTCAGAAGCC
GCTGAAATTTCAATTGAAATTGGTGGTCGTCAGGCGTCCAAAGGCAAGGC
TTATTTGGGCAGCAAGCAAAAAAGTAATTCATCAGTGCTAGTGGAGGGCA
TGGAAATGATGGTGACATCAAAGTTGATAGATACAGACGG
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