CK934286
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: PSD13_DICDI (26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.639e-37 Identity = 85/260 (32.69%), Postives = 136/260 (52.31%), Query Frame = 1 Query: 133 LQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQG---DRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQELCRVH 903 L+YLE L+ P+L + N + D Y+ KLWHQLT ++E + L Y NFI DFE K+ L L + V+RQ+ ++ ++E + +K++ + + + IA L G ++CKK LE K L +T +D VY+++Y VS+ YH + +EFYK AL+YL+Y +E G+N+Y FG+L+A+PI+ +L G++ WL L+AFN GD+ +++ L H Sbjct: 7 LEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIRDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKVK-----KDKSAYILTLSYIANMNLRSGVAEQLQDCKKTLELAKEELQGVTGLDTIVYSSFYRVSTDYHMAKSQASEFYKNALMYLSYCKLETISQEEQASLAYNLCIAALVGENVYGFGDLIANPILKALEGSQHNWLIAFLKAFNIGDIQQFEGLMSQH 260
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: PSD13_RAT (26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.141e-37 Identity = 86/251 (34.26%), Postives = 139/251 (55.38%), Query Frame = 1 Query: 139 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQEL 891 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L ++ G+ ++NFGELL HP++ SL T +WL L AFNSGD+ R+Q L Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGDVDRFQTL 251
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: PSD13_BOVIN (26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus GN=PSMD13 PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 2.141e-37 Identity = 87/251 (34.66%), Postives = 138/251 (54.98%), Query Frame = 1 Query: 139 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQEL 891 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+S+LE EK++++ +E ++ K I KL GD + K+ +ED + L ++ + SV++ +Y +SS+Y++ A +YK AL +L ++ GD ++NFGELL HP++ SL T +WL L AFNSG++ R+Q L Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGDGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGNVERFQTL 251
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: PSD13_HUMAN (26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.388e-36 Identity = 85/251 (33.86%), Postives = 139/251 (55.38%), Query Frame = 1 Query: 139 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQEL 891 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L ++ G+ ++NFGELL HP++ SL T +WL L AFNSG++ R+Q L Sbjct: 7 FLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRNTDRQWLIDTLYAFNSGNVERFQTL 251
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: PSD13_MOUSE (26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 2.367e-36 Identity = 85/251 (33.86%), Postives = 138/251 (54.98%), Query Frame = 1 Query: 139 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQEL 891 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED + L+++ + SV++ +Y +SS+Y++ A +YK AL +L ++ G+ ++NFGELL HP++ SL T +WL L AFNSG + R+Q L Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCVDIKDLPVSEQQERAFTLGLAGLLGEGVFNFGELLMHPVLESLRDTDRQWLIDTLYAFNSGAVDRFQTL 251
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: PSD13_CHICK (26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 6.888e-36 Identity = 85/251 (33.86%), Postives = 138/251 (54.98%), Query Frame = 1 Query: 139 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQEL 891 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +E+ + L+++ + SV++ +Y +SS+Y++ A +YK AL +L V+ G+ +YNFGELL HP++ SL T +WL L AFNSG++ +Q L Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEEVEEMLNNLPGV-TSVHSRFYDLSSKYYQTIGNHASYYKDALRFLGCIDVKDLPVSEQQERAFTLGLAGLLGEGVYNFGELLMHPVLESLRSTDRQWLIDTLYAFNSGNVETFQAL 251
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: RPN9_SCHPO (Probable 26S proteasome regulatory subunit rpn9 OS=Schizosaccharomyces pombe GN=rpn9 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 4.188e-25 Identity = 73/243 (30.04%), Postives = 122/243 (50.21%), Query Frame = 1 Query: 172 LGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDAL---IQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVEXXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTGTKVEWLYYILQAFNSGDLVRYQEL 891 L + Y + DLY++KLW QLT L F F + + + LY NF+ F IN LK + + +A + L ++ +L +E++ ++ +Y + IA KL G E ++LL +D + ++ ++++YY VS+ Y+K ++A++Y+ LLYL+ ++ GD IYNFGELL HP+ L GT+ EWL+ ++ A N GDL ++ L Sbjct: 24 LQQSYILMEDLYERKLWKQLTDALIVF-----FDTPETVPLRLPLYTNFVNSFRPNINQLKAVYMGLKAFESCSNDEA-LRNLNQIVNEL---DEEKYKDAYVYSIVAIARIKLISGKLDEARELLVKASKIIDHIDYVESLIHSSYYSVSADYYKAKADYAQYYRHCLLYLSCIDLDKCSHTELVERAVDLSVAAILGD-IYNFGELLLHPVFELLVGTQHEWLHDLVIAMNVGDLPLFERL 256
BLAST of CK934286 vs. ExPASy Swiss-Prot
Match: RPN9_YEAST (26S proteasome regulatory subunit RPN9 OS=Saccharomyces cerevisiae GN=RPN9 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.733e-23 Identity = 73/264 (27.65%), Postives = 125/264 (47.35%), Query Frame = 1 Query: 142 LESLRND-HPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKE--------EPILYIKMQIAMFKLEQGDRKECKKLLEDGKSTLDSMTDIDPSVYANYYWVSSQYHKFHQEFAEFYKCALLYLAYTSVE-XXXXXXXXXXXXXXXXXXXXGDNIYNFGELLAHPIINSLTG-TKVEWLYYILQAFNSGDLVRYQELCRV 900 L +LR + P L + Y++KLW QL+ L +F A ++ ++LY NF++ F KIN L + + + + + ++ YL+ + + + + +++ + IL I +IA L + D + + LL+D + TLD I + ++Y +SQY KF +F FY +LLYL+ GD IYNFGELL HPI+ ++ + +WL+ +L A GD ++ L +V Sbjct: 11 LSTLRMEADPSLHPLFEQFEKFYEEKLWFQLSESLTKFFDDA--KSTPLRLRLYDNFVSKFYDKINQLSVVKYLLASLKDSKDFDESLKYLDDLKAQFQELDSKKQRNNGSKDHGDGILLIDSEIARTYLLKNDLVKARDLLDDLEKTLDKKDSIPLRITNSFYSTNSQYFKFKNDFNSFYYTSLLYLSTLEPSTSITLAERQQLAYDLSISALLGDKIYNFGELLHHPIMETIVNDSNYDWLFQLLNALTVGDFDKFDSLIKV 272 The following BLAST results are available for this feature:
BLAST of CK934286 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934286 ID=CK934286; Name=CK934286; organism=Citrus sinensis; type=EST; length=920bpback to top |