CK934293

Overview
NameCK934293
Unique NameCK934293
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length412
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8732 contig Csv1_Contig8732:703..1114. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_TOBAC (Inositol-3-phosphate synthase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_SPIPO (Inositol-3-phosphate synthase OS=Spirodela polyrrhiza GN=TUR1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_SESIN (Inositol-3-phosphate synthase OS=Sesamum indicum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_NICPA (Inositol-3-phosphate synthase OS=Nicotiana paniculata GN=INPS1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_MESCR (Inositol-3-phosphate synthase OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  476 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 512
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_CITPA (Inositol-3-phosphate synthase OS=Citrus paradisi PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  471 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 507
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_BRANA (Inositol-3-phosphate synthase OS=Brassica napus PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 3.265e-14
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO3_ARATH (Probable inositol-3-phosphate synthase isozyme 3 OS=Arabidopsis thaliana GN=At5g10170 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.265e-14
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLEN+LRACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALSKQRAMLENVLRACVGLAPENNMILEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO2_ARATH (Inositol-3-phosphate synthase isozyme 2 OS=Arabidopsis thaliana GN=At2g22240 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.570e-14
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNALSKQRAMLENILRACVGLAPENNMI+EYK
Sbjct:  474 PGTPVVNALSKQRAMLENILRACVGLAPENNMIMEYK 510
[Close]
BLAST of CK934293 vs. ExPASy Swiss-Prot
Match: INO1_ORYSJ (Inositol-3-phosphate synthase OS=Oryza sativa subsp. japonica GN=INO1 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 1.241e-13
Identity = 35/37 (94.59%), Postives = 37/37 (100.00%), Query Frame = 3 
Query:    6 PGTPVVNALSKQRAMLENILRACVGLAPENNMILEYK 116
            PGTPVVNAL+KQRAMLENI+RACVGLAPENNMILEYK
Sbjct:  474 PGTPVVNALAKQRAMLENIMRACVGLAPENNMILEYK 510
The following BLAST results are available for this feature:
BLAST of CK934293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
INO1_TOBAC3.265e-14100.00Inositol-3-phosphate synthase OS=Nicotiana tabacum... [more]
INO1_SPIPO3.265e-14100.00Inositol-3-phosphate synthase OS=Spirodela polyrrh... [more]
INO1_SESIN3.265e-14100.00Inositol-3-phosphate synthase OS=Sesamum indicum P... [more]
INO1_NICPA3.265e-14100.00Inositol-3-phosphate synthase OS=Nicotiana panicul... [more]
INO1_MESCR3.265e-14100.00Inositol-3-phosphate synthase OS=Mesembryanthemum ... [more]
INO1_CITPA3.265e-14100.00Inositol-3-phosphate synthase OS=Citrus paradisi P... [more]
INO1_BRANA3.265e-14100.00Inositol-3-phosphate synthase OS=Brassica napus PE... [more]
INO3_ARATH4.265e-1497.30Probable inositol-3-phosphate synthase isozyme 3 O... [more]
INO2_ARATH5.570e-1497.30Inositol-3-phosphate synthase isozyme 2 OS=Arabido... [more]
INO1_ORYSJ1.241e-1394.59Inositol-3-phosphate synthase OS=Oryza sativa subs... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_H05 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_H05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934293 ID=CK934293; Name=CK934293; organism=Citrus sinensis; type=EST; length=412bp
GGGCTCCAGGCACACCAGTGGTGAATGCGCTGTCGAAGCAGCGTGCAATG
CTTGAGAACATTCTGAGGGCTTGCGTTGGCTTGGCTCCTGAGAACAACAT
GATTTTGGAATACAAGTGAAGAACTTGCAGGGGAGAAAAGTGGAAGAACC
GGTATTCCCTTTCTCTGTCACCAATCAAAGCTGTGGTGGTCCATTTAATT
ACTGATTGTAATGTCTTGTGTCATGAAATTGTGGTTAATATTAGTGTCCT
GTATGTTTGCTCTTTTATTTTTTTAATGAAGGTGCTGGAGTGTAGCCCAT
TGCCTTTGTAGCTCATTTCGGAGCATGCAATCTCTTGTATTGCAAGTAGA
TAATATATGGAAGTTCATAAAAAAAAAAAAAAAGAAAAAAAAAAAAAAAA
AAAAAAAAAAAA
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