CK934306

Overview
NameCK934306
Unique NameCK934306
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length621
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10290 contig Csv1_Contig10290:273..893. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934306 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 73.559 bits (179), Expect = 9.271e-13
Identity = 64/208 (30.77%), Postives = 97/208 (46.63%), Query Frame = 3
Query:   42 MKTSLVTTLSFL----ILALTTKPQLGASQS--EPILDVYGNQVDSSHRYYLVSPLWGVKTGGGISADKGK-NGQ--CPTDVIQLSPKDKRGKNLVLLP-NDNSIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSXPVNGSCDTLCKDVGV 617
            MK   + +LSF     +LA    P L A+ S   P+LD+ G ++ +   YY+V  L     GGG++      NG   CP  V+Q   +    + L   P N    +VR ST++ + FS     +  +  ++W++D  + S G+ F+TIG  K      T  + FK+E+   S F           YK+V C   V GSC   C DVG+
Sbjct:    1 MKELTMLSLSFFFVSALLAAAANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRD--HGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFPENPKEDVVRVSTDLNINFSAFMPCRWTSS-TVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEEFCGSGF-----------YKLVFC-PTVCGSCKVKCGDVGI 193          
BLAST of CK934306 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.748e-11
Identity = 55/201 (27.36%), Postives = 96/201 (47.76%), Query Frame = 3
Query:   42 MKTSLVTTLSFLILALTTKPQ---LGASQSEPILDVYGNQVDSSHRYYLVSPLWGVKTGGGISADKGKNGQCPTDVIQLSPKDKRGKNLVLLPNDN-SIIVRESTNIKLKFSRVSSLQQCNKDSLWKVDNDNASLGKQFITIGEGK------TCQNLFKLEKVSASIFDMKIALDIPCLYKIVHCSXPVNGSCDTLCKDVG 614
            MKT+  T +  L+ A T+K     +  + + P+LD  G+++ +  +YY++S + G   GGG++  +     CP  V+Q       G  ++    D+   +VR ST++ ++F  +   + C+  ++W++DN + S GK ++T    K      T  + FK+EK                 YK   C   V  SC TLC D+G
Sbjct:    1 MKTA--TAVVLLLFAFTSKSYFFGVANAANSPVLDTDGDELQTGVQYYVLSSISGA-GGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEFVPIRD-RLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGV------------LGYKFRFC-PSVCDSCTTLCSDIG 184          
The following BLAST results are available for this feature:
BLAST of CK934306 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
MIRA_RICDU9.271e-1330.77Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC1.748e-1127.3621 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004260_G10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934306 ID=CK934306; Name=CK934306; organism=Citrus sinensis; type=EST; length=621bp
GGGACAAAACAAACCCCTTCTACCTCAAAAAAAATAAACTAATGAAGACT
TCCTTAGTAACAACACTCTCCTTCCTTATACTTGCTTTGACCACAAAACC
TCAGTTGGGCGCCTCACAATCTGAACCTATCTTAGATGTCTATGGCAACC
AGGTGGACTCCAGCCACAGGTATTATCTTGTCTCACCACTCTGGGGAGTT
AAAACCGGCGGTGGAATTAGCGCGGACAAAGGCAAAAATGGACAGTGTCC
AACGGATGTTATCCAATTAAGTCCTAAGGACAAAAGGGGAAAGAATTTAG
TTTTACTTCCGAATGACAATTCCATAATTGTCCGGGAGTCCACTAATATT
AAATTGAAATTCTCAAGAGTTTCTTCTCTTCAGCAGTGTAACAAAGATTC
GTTGTGGAAAGTTGACAACGATAACGCTTCATTAGGAAAGCAGTTTATAA
CAATCGGTGAAGGTAAAACGTGTCAAAATTTGTTTAAACTTGAGAAAGTT
AGTGCATCAATATTTGATATGAAAATAGCACTAGACATTCCCTGTCTATA
CAAAATTGTTCATTGTTCNNCACCTGTTAATGGTTCTTGTGATACACTCT
GCAAAGACGTTGGCGTTTCTA
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