CK934322

Overview
NameCK934322
Unique NameCK934322
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length344
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM4_ARATH (Secretory carrier-associated membrane protein 4 OS=Arabidopsis thaliana GN=SCAMP4 PE=2 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.778e-51
Identity = 53/60 (88.33%), Postives = 56/60 (93.33%), Query Frame = 1
Query:  160 CWIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 339
            CWIKGGGV+IFFLATIYAL+G P+SYVLWYRPLYRAMRTDSALKF WFF  YLIHIGFCI
Sbjct:  141 CWIKGGGVKIFFLATIYALIGCPLSYVLWYRPLYRAMRTDSALKFGWFFFTYLIHIGFCI 200          

HSP 2 Score: 102.834 bits (255), Expect = 1.778e-51
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIL 161
            DDKNWPPFFPIIHHDI+KEIP+HAQ+LQYLAFASW GIVLCLVFNVIA ++
Sbjct:   90 DDKNWPPFFPIIHHDIAKEIPVHAQKLQYLAFASWLGIVLCLVFNVIATMV 140          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM6_ORYSJ (Secretory carrier-associated membrane protein 6 OS=Oryza sativa subsp. japonica GN=SCAMP6 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.424e-44
Identity = 46/60 (76.67%), Postives = 53/60 (88.33%), Query Frame = 1
Query:  160 CWIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 339
            CWIK G  ++FFLATIYALLG+P+SY++WYRPLYRAMRT+SA  F WFFL YLIHIGFCI
Sbjct:  150 CWIKEGDSKLFFLATIYALLGIPLSYLIWYRPLYRAMRTNSAFSFGWFFLCYLIHIGFCI 209          

HSP 2 Score: 92.0485 bits (227), Expect = 1.424e-44
Identity = 40/53 (75.47%), Postives = 46/53 (86.79%), Query Frame = 3
Query:    3 PTDDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIL 161
            P +DKNWPPFFPIIHHDI+ EIP + Q+LQYLAFASW GIVLCL +N IAVI+
Sbjct:   97 PMEDKNWPPFFPIIHHDIANEIPANLQKLQYLAFASWLGIVLCLSWNFIAVIV 149          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM5_ORYSJ (Secretory carrier-associated membrane protein 5 OS=Oryza sativa subsp. japonica GN=SCAMP5 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 1.856e-44
Identity = 42/61 (68.85%), Postives = 53/61 (86.89%), Query Frame = 1
Query:  160 CWIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            CWI+GG  ++FFLATIY +LG+P+SY++WYRPLYRAMRTDSA  F WFFL Y++HI FC+F
Sbjct:  158 CWIRGGDSKLFFLATIYGMLGMPLSYLMWYRPLYRAMRTDSAFSFGWFFLCYMLHIAFCVF 218          

HSP 2 Score: 92.8189 bits (229), Expect = 1.856e-44
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 3
Query:    3 PTDDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAVIL 161
            P ++KNWPPFFPIIHHDI+ EIP +AQ+LQYLAFASW GIVLCL +N IAVI+
Sbjct:  105 PMEEKNWPPFFPIIHHDIANEIPANAQKLQYLAFASWLGIVLCLFWNFIAVIV 157          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM_PEA (Secretory carrier-associated membrane protein OS=Pisum sativum GN=PSAM2 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.627e-39
Identity = 44/59 (74.58%), Postives = 51/59 (86.44%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCI 339
            WIKG GV+I+FLA IY + GVP +Y LWYRPLYRA RTDSA+KF WFF+FYL+HIGFCI
Sbjct:  148 WIKGEGVKIWFLAIIYFIAGVPGAYALWYRPLYRAFRTDSAIKFGWFFMFYLLHIGFCI 206          

HSP 2 Score: 80.1073 bits (196), Expect = 1.627e-39
Identity = 33/49 (67.35%), Postives = 42/49 (85.71%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155
            ++KNWPPFFPIIHHDI+ EIPIH + LQY+AF S  G+VLCL +NV++V
Sbjct:   96 EEKNWPPFFPIIHHDITNEIPIHLRTLQYVAFFSLLGLVLCLTWNVVSV 144          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM3_ARATH (Secretory carrier-associated membrane protein 3 OS=Arabidopsis thaliana GN=SCAMP3 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.120e-39
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            WIKG GV I+ LA IY + GVP  YVLWYRPLYRA RTDSAL F WFFLFY++HI FC+F
Sbjct:  149 WIKGEGVTIWLLALIYFIAGVPGGYVLWYRPLYRAFRTDSALSFGWFFLFYMLHIAFCVF 208          

HSP 2 Score: 83.1889 bits (204), Expect = 2.120e-39
Identity = 33/47 (70.21%), Postives = 42/47 (89.36%), Query Frame = 3
Query:   15 KNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155
            KNWPPFFP+IHHDI+ EIP+H QRLQY+ FA++ G+VLCL +N+IAV
Sbjct:   99 KNWPPFFPLIHHDIANEIPVHLQRLQYVTFATYLGLVLCLFWNIIAV 145          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM1_ARATH (Secretory carrier-associated membrane protein 1 OS=Arabidopsis thaliana GN=SCAMP1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.121e-39
Identity = 43/60 (71.67%), Postives = 48/60 (80.00%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            WIKG G  I+FLA IY + GVP +YV+WYRPLYRAMRTDSALKF WFF  YL HI FC+F
Sbjct:  142 WIKGEGPTIWFLAIIYFISGVPGAYVMWYRPLYRAMRTDSALKFGWFFFTYLFHIAFCVF 201          

HSP 2 Score: 84.7297 bits (208), Expect = 2.121e-39
Identity = 33/49 (67.35%), Postives = 44/49 (89.80%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155
            ++KNWPPFFP+IHHDIS EIPIH QR+QY+AF S  G+V+CL++N++AV
Sbjct:   90 EEKNWPPFFPLIHHDISNEIPIHLQRIQYVAFTSMLGLVVCLLWNIVAV 138          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM2_ORYSJ (Secretory carrier-associated membrane protein 2 OS=Oryza sativa subsp. japonica GN=SCAMP2 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.599e-39
Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            WIKG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFYLIHI FCI+
Sbjct:  146 WIKGAGVMIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHILFCIW 205          

HSP 2 Score: 82.4185 bits (202), Expect = 3.599e-39
Identity = 34/48 (70.83%), Postives = 41/48 (85.42%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIA 152
            ++KNWPPFFPIIHHDIS EIPIH QR+QYLAF+S  G+  CL +N+IA
Sbjct:   94 EEKNWPPFFPIIHHDISNEIPIHLQRMQYLAFSSLLGLAACLFWNIIA 141          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM4_ORYSJ (Secretory carrier-associated membrane protein 4 OS=Oryza sativa subsp. japonica GN=SCAMP4 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 6.101e-39
Identity = 42/60 (70.00%), Postives = 50/60 (83.33%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            WIKG G +I+FLA IY +LG P +Y LWYRPLYRAMR +SALKF WFFLFYL+HI FC++
Sbjct:  173 WIKGEGPKIWFLAVIYFILGCPGAYYLWYRPLYRAMRNESALKFGWFFLFYLVHIAFCVY 232          

HSP 2 Score: 81.6481 bits (200), Expect = 6.101e-39
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155
            +DKNWPPFFPIIH+DI  EIP+H QR QY+AFAS  G+VLCL +N+I V
Sbjct:  121 EDKNWPPFFPIIHNDIGNEIPVHLQRTQYVAFASLLGLVLCLFWNIICV 169          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM3_ORYSJ (Secretory carrier-associated membrane protein 3 OS=Oryza sativa subsp. japonica GN=SCAMP3 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.294e-38
Identity = 43/60 (71.67%), Postives = 50/60 (83.33%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            W+KG GV I+ LA IY + GVP +YVLWYRPLY AMRT+SALKF WFFLFYLIHI FC++
Sbjct:  142 WVKGEGVIIWLLAIIYFISGVPGAYVLWYRPLYNAMRTESALKFGWFFLFYLIHIIFCVW 201          

HSP 2 Score: 82.4185 bits (202), Expect = 2.294e-38
Identity = 33/48 (68.75%), Postives = 42/48 (87.50%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIA 152
            +DKNWPPFFP+IHH+IS EIPIH QR+QYLAF+S+ G+  CL +N+IA
Sbjct:   90 EDKNWPPFFPLIHHNISNEIPIHLQRMQYLAFSSFLGLAACLFWNIIA 137          
BLAST of CK934322 vs. ExPASy Swiss-Prot
Match: SCAM1_ORYSJ (Secretory carrier-associated membrane protein 1 OS=Oryza sativa subsp. japonica GN=SCAMP1 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.539e-36
Identity = 42/60 (70.00%), Postives = 48/60 (80.00%), Query Frame = 1
Query:  163 WIKGGGVQIFFLATIYALLGVPMSYVLWYRPLYRAMRTDSALKFSWFFLFYLIHIGFCIF 342
            W+KG GV+I+ LA IY + GVP +YVLWYRPLY AMRTDSALKF  FFL YL HI FC+F
Sbjct:  166 WVKGEGVKIWLLAIIYFISGVPGAYVLWYRPLYNAMRTDSALKFGLFFLVYLFHILFCVF 225          

HSP 2 Score: 78.9518 bits (193), Expect = 4.539e-36
Identity = 32/49 (65.31%), Postives = 41/49 (83.67%), Query Frame = 3
Query:    9 DDKNWPPFFPIIHHDISKEIPIHAQRLQYLAFASWFGIVLCLVFNVIAV 155
            ++KNWPPF P+IHHDI+ EIP H QR+QY+AFAS+ G+  CL +NVIAV
Sbjct:  114 EEKNWPPFLPLIHHDITNEIPSHLQRMQYVAFASFLGLACCLFWNVIAV 162          
The following BLAST results are available for this feature:
BLAST of CK934322 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
SCAM4_ARATH1.778e-5188.33Secretory carrier-associated membrane protein 4 OS... [more]
SCAM6_ORYSJ1.424e-4476.67Secretory carrier-associated membrane protein 6 OS... [more]
SCAM5_ORYSJ1.856e-4468.85Secretory carrier-associated membrane protein 5 OS... [more]
SCAM_PEA1.627e-3974.58Secretory carrier-associated membrane protein OS=P... [more]
SCAM3_ARATH2.120e-3971.67Secretory carrier-associated membrane protein 3 OS... [more]
SCAM1_ARATH2.121e-3971.67Secretory carrier-associated membrane protein 1 OS... [more]
SCAM2_ORYSJ3.599e-3975.00Secretory carrier-associated membrane protein 2 OS... [more]
SCAM4_ORYSJ6.101e-3970.00Secretory carrier-associated membrane protein 4 OS... [more]
SCAM3_ORYSJ2.294e-3871.67Secretory carrier-associated membrane protein 3 OS... [more]
SCAM1_ORYSJ4.539e-3670.00Secretory carrier-associated membrane protein 1 OS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004260_E02 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIIF_E02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934322 ID=CK934322; Name=CK934322; organism=Citrus sinensis; type=EST; length=344bp
TTCCCACAGACGATAAAAATTGGCCACCTTTTTTTCCAATTATTCATCAT
GACATATCGAAGGAGATACCAATTCATGCTCAAAGGCTGCAGTATCTTGC
TTTTGCTAGTTGGTTTGGTATAGTTCTCTGTCTTGTATTCAATGTAATTG
CCGTGATTCTGTTGGATTAAAGGCGGTGGTGTCCAAATCTTTTTCCTTGC
AACAATTTATGCTTTGCTTGGAGTGCCTATGTCATATGTTCTATGGTACA
GGCCTCTTTATCGAGCAATGAGGACGGATAGTGCATTGAAGTTCAGCTGG
TTTTTCCTGTTCTACTTGATCCACATCGGTTTTTGTATCTTTGC
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