CK934339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 1.373e-80 Identity = 140/209 (66.99%), Postives = 173/209 (82.78%), Query Frame = 3 Query: 219 AFKSKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGAL 845 +FKSK++RLFGRE+P+H VLG GKPADIFLWRNKK+S GVLG TA WVLFEL EYHL+ +CH +I +LA LFLWSNA TFI++S P IP V +PE +L+ S LR EINR L +LR IASG+D+KKF+ VIAGLW+LS++G+ NF+TLFY VLL T+PV+YEKYEDK+D++GEKA EIKKQYAV DEKVL+KV+S+IP+GAL Sbjct: 44 SFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPRGAL 252
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 3.995e-80 Identity = 146/208 (70.19%), Postives = 172/208 (82.69%), Query Frame = 3 Query: 219 AFKSKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGA 842 + K+K++RLFGRE+P+H + G GKPADIFLWRNKK+S GVLG AT W+LFELLEY+L+TL HISIL+LAVLFLWS+ASTFI++SP IP V +PE VL+ AS LR EINR VLR+IASGRDLKKFL VIAGLW+LS VG+ CNF+TL YI VLL T+PV+YEKYEDK+D FGEKA EIKKQY FD KVL KV+S+IPKGA Sbjct: 40 SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKGA 247
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1) HSP 1 Score: 291.197 bits (744), Expect = 4.883e-78 Identity = 142/209 (67.94%), Postives = 172/209 (82.30%), Query Frame = 3 Query: 219 AFKSKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGAL 845 + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+ I+ LAVLFLWSNA+ FIN+SPP+IP V +PE+ +L+ AS LR EINR + LREIASGRDLKKFL IAGLW+LS++G NF+TL YI VLL TVP+ Y+KYEDK+D GEKA IE+KKQYAV DE KVLS+IP G L Sbjct: 65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDE----KVLSKIPLGPL 269
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.571e-76 Identity = 136/209 (65.07%), Postives = 172/209 (82.30%), Query Frame = 3 Query: 219 AFKSKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGAL 845 + KSKV+RLFGRERP+H VLG GKPADIF+W++KK+S GV GGAT WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI++SPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL IAGLW+LS++G +F+TL YI VLL TVP+ Y+KYEDK+DS+GEKA E+KKQYAV D KV S+IP+G L Sbjct: 61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLD----AKVFSKIPRGPL 265
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.962e-75 Identity = 137/243 (56.38%), Postives = 180/243 (74.07%), Query Frame = 3 Query: 93 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 818 MAE + +++SL+EKI+ A K+K++R+FGRE+P+H VLG GKPAD+FLWR+KK+S VLG ATA+WVLFEL+EYHL++L+CHISIL+L LFLWSNA T IN++ P+IP + +PE+ L AS+LR E+N+A +LR IA GRDLKKFL V+ GLW++SVVGNW NF+TL YI FV+LHTVP++YEK+EDK+D EKA E++KQY VFDEKVL K+ Sbjct: 1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSKI 243
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 269.626 bits (688), Expect = 1.521e-71 Identity = 134/243 (55.14%), Postives = 172/243 (70.78%), Query Frame = 3 Query: 93 MAEHAPEHESSDKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 818 MAE + ++SL+EKI A K+K++RLFGRE+P+H VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL SNA F+N++PP+IP + + E+ L SALR E+N+A +LR IA GRDLKKFL V+ GLW++SVVGNW NF+TL YI FV+LHTVP++YEK+EDK+D EK E+KK Y VFDEKVL K+ Sbjct: 1 MAEELEKSMHKEESLMEKIADKIHDHDSSSSSDSEHEKPESPSALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSKL 243
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2) HSP 1 Score: 218.779 bits (556), Expect = 3.080e-56 Identity = 104/195 (53.33%), Postives = 142/195 (72.82%), Query Frame = 3 Query: 234 VFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKV 818 ++R+FGRERPIH VLG GKPAD+ LWR+KK++ G+L T +W+LF L+T +C SIL L + FLWSNA +N+SP + + +PEK +L+ ASA+ +E+N A A LR IA RD+K F+ + GLWL+SV+GNW +F++L YI FVL+HTVP++YEKYED+ID EKA IE+KK Y VF+ K L K+ Sbjct: 51 IYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSKI 242
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 6.011e-52 Identity = 98/204 (48.04%), Postives = 139/204 (68.14%), Query Frame = 3 Query: 228 SKVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKG 839 S+ RLF R++PIHHVLG GK AD+ LWRNKKISA VL GATA+WVLFE + +H ++LVC+ +L + F+WSNAS F+N S +P + LP+ F E A+ E+NR L L+++A +LK+FL + GLW+ ++VG+ CNF+T+ YI FV HT+PV+YE+YED++D F + ++ Y +K+ LSRIP G Sbjct: 40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHY----KKLDTGFLSRIPSG 239
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 8.143e-41 Identity = 85/205 (41.46%), Postives = 124/205 (60.49%), Query Frame = 3 Query: 231 KVFRLFGRERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSRIPKGAL 845 K +LF R+R IH + G GK ADI LWR KI+A ++ G + +W L E++EY+ ITL+CH S+ S+ F+WS AS F+N P IP V L E + A + N+ L L ++A GRD F L+++S++G + NFV L +I FV + T+PV+YE YED +D+ K ++KK Y +KV VLS+IP+G + Sbjct: 19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLY----KKVDTNVLSKIPRGTV 219
BLAST of CK934339 vs. ExPASy Swiss-Prot
Match: RTNLJ_ARATH (Reticulon-like protein B10 OS=Arabidopsis thaliana GN=RTNLB10 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.066e-32 Identity = 69/191 (36.13%), Postives = 110/191 (57.59%), Query Frame = 3 Query: 255 ERPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINESPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSVVGNWCNFVTLFYIVFVLLHTVPVIYEKYEDKIDSFGEKATIEIKKQYAVFDEKVLKKVLSR 827 E +H + G AD+ +W+N++ +LG T +W LFE Y V + +LS+ +LFLW+ ++ N P++P + + E+FV A A+R IN LAV REI GR+ K+ V LW +S VGN+ NF+T+ Y+ VL +P +YE+Y+D ID I+ QY DE++L+K++++ Sbjct: 2 EESVHQSIRFGSVADLIMWKNRRGGFLLLGSTTLLWFLFEKCGYSFFPFVVNTQLLSVVILFLWAKSAILFNRPMPQLPNLEITEEFVFMVADAIRVWINTVLAVAREIYVGRNAKQLFRVSVVLWTVSFVGNFLNFLTILYLGVVLSLLIPFLYERYQDLIDEKLSLTHRVIQTQYRKIDERLLQKIIAK 192 The following BLAST results are available for this feature:
BLAST of CK934339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934339 ID=CK934339; Name=CK934339; organism=Citrus sinensis; type=EST; length=845bpback to top |