CK934388 | Citrus Genome Database

Overview


Name	CK934388
Unique Name	CK934388
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	433

Libraries


Library Name	Type
Developing fruit peel at 38 DAFB	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig6873	contig	Csv1_Contig6873:288..720.	BLAST: Citrus Unigene V1 Contigs to Populus V2 proteins

Homology

[Close]

BLAST of CK934388 vs. ExPASy Swiss-Prot
Match: ART2_YEAST (Uncharacterized protein ART2 OS=Saccharomyces cerevisiae GN=ART2 PE=4 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 4.715e-11
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = -3

Query:  288 EISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRP 398
            EISVL E  LGHLRY LTDVPPQPNSPPDNVF PD+P
Sbjct:   21 EISVLHEPPLGHLRYRLTDVPPQPNSPPDNVFNPDQP 57

The following BLAST results are available for this feature:

BLAST of CK934388 vs. ExPASy Swiss-Prot

BLAST of CK934388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
ART2_YEAST	4.715e-11	83.78	Uncharacterized protein ART2 OS=Saccharomyces cere...	[more]

Properties


Property Name	Value
Genbank description	CGF1004259_F04 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IIF_F04 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CK934388 ID=CK934388; Name=CK934388; organism=Citrus sinensis; type=EST; length=433bp
ATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCT
GTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCA
GCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAA
TGACTTGAGAGGTGTAGTATAAGTGGGAGCCGGAAACGGTGAAAGTGAAA
TACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGG
CACTGCCCCTCTTTTTGGACCCAAGGCCCCCTCACGGGGGTCGATCCGGG
CGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAA
AAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGT
GTGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA