CK934453

Overview
NameCK934453
Unique NameCK934453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12719 contig Csv1_Contig12719:137..1062. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934453 vs. ExPASy Swiss-Prot
Match: ACYP_SPHWW (Acylphosphatase OS=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) GN=acyP PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.717e-13
Identity = 40/79 (50.63%), Postives = 50/79 (63.29%), Query Frame = 2
Query:  479 FYRNWTIENATQLGLRGWVRNRRDGSVEALFSGNPDSVKEMEQRCRHGPPDAVVTGLQVFPSNDDPGT---GFVRKQTV 706
            ++R WT+E A +LGL GWVRNR DGSVEA+ +G  D V+EM  RCR G P + V  + V    D PG    GF +K TV
Sbjct:   24 WFRAWTVEQAAELGLDGWVRNRADGSVEAVAAGPADRVEEMIARCRRGSPASRVDSIDV---EDTPGVVAQGFTQKPTV 99          
BLAST of CK934453 vs. ExPASy Swiss-Prot
Match: ACYP_RHORT (Acylphosphatase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=acyP PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 38/76 (50.00%), Postives = 47/76 (61.84%), Query Frame = 2
Query:  479 FYRNWTIENATQLGLRGWVRNRRDGSVEALFSGNPDSVKEMEQRCRHGPPDAVVTGLQVFPSNDDPGTGFVRKQTV 706
            +YR WT+E A  LGL GWVRNR DG+VEALF G   +V+ M   CR GPP A V  L+V P       GF +K ++
Sbjct:   16 WYRGWTVETAKGLGLAGWVRNRADGTVEALFHGPEAAVEAMLIACRGGPPSARVDDLRVTPVAAPDQPGFSQKPSL 91          
BLAST of CK934453 vs. ExPASy Swiss-Prot
Match: ACYP_RHOFD (Acylphosphatase OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=acyP PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.009e-12
Identity = 34/65 (52.31%), Postives = 40/65 (61.54%), Query Frame = 2
Query:  479 FYRNWTIENATQLGLRGWVRNRRDGSVEALFSGNPDSVKEMEQRCRHGPPDAVVTGLQVFPSNDD 673
            FYR   +  A  LGLRGWVRNR DGSVEA+  G    V  M +  R GP +AVVT + +FPS  D
Sbjct:   18 FYRGSMVSRANALGLRGWVRNRLDGSVEAVVQGEATEVNRMVEWARRGPSNAVVTSVNIFPSEGD 82          
BLAST of CK934453 vs. ExPASy Swiss-Prot
Match: ACYP_BRAJA (Acylphosphatase OS=Bradyrhizobium japonicum GN=acyP PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.009e-12
Identity = 33/53 (62.26%), Postives = 37/53 (69.81%), Query Frame = 2
Query:  482 YRNWTIENATQLGLRGWVRNRRDGSVEALFSGNPDSVKEMEQRCRHGPPDAVV 640
            YR W    AT  GL GWVRNRRDGSVEALF+G P+ V +M   CRHGPP + V
Sbjct:   19 YRAWVEYQATASGLEGWVRNRRDGSVEALFAGAPNHVADMVALCRHGPPSSRV 71          
BLAST of CK934453 vs. ExPASy Swiss-Prot
Match: ACYP_NITHX (Acylphosphatase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=acyP PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 9.154e-12
Identity = 33/60 (55.00%), Postives = 43/60 (71.67%), Query Frame = 2
Query:  482 YRNWTIENATQLGLRGWVRNRRDGSVEALFSGNPDSVKEMEQRCRHGPPDAVVTGLQVFP 661
            +R WT+  A +LG+ GWVRNRRDGSVEALF+G  D+V +M  RCR+GP  A V  ++  P
Sbjct:   19 FRYWTMREAIRLGVAGWVRNRRDGSVEALFAGPADAVADMVARCRNGPGAARVDAVEDQP 78          
BLAST of CK934453 vs. ExPASy Swiss-Prot
Match: ACYP_NITWN (Acylphosphatase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=acyP PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 2
Query:  482 YRNWTIENATQLGLRGWVRNRRDGSVEALFSGNPDSVKEMEQRCRHGPPDAVVTGLQVFP 661
            +R WT+  A + G+ GWVRNRRDGSVEALF+G+ ++V EM  RCR GP  A V  ++  P
Sbjct:   19 FRYWTMREAIRFGVGGWVRNRRDGSVEALFAGSTEAVAEMITRCRSGPEFARVDDIEDQP 78          
The following BLAST results are available for this feature:
BLAST of CK934453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
ACYP_SPHWW3.717e-1350.63Acylphosphatase OS=Sphingomonas wittichii (strain ... [more]
ACYP_RHORT1.081e-1250.00Acylphosphatase OS=Rhodospirillum rubrum (strain A... [more]
ACYP_RHOFD7.009e-1252.31Acylphosphatase OS=Rhodoferax ferrireducens (strai... [more]
ACYP_BRAJA7.009e-1262.26Acylphosphatase OS=Bradyrhizobium japonicum GN=acy... [more]
ACYP_NITHX9.154e-1255.00Acylphosphatase OS=Nitrobacter hamburgensis (strai... [more]
ACYP_NITWN4.543e-1153.33Acylphosphatase OS=Nitrobacter winogradskyi (strai... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004258_H10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934453 ID=CK934453; Name=CK934453; organism=Citrus sinensis; type=EST; length=926bp
GGGGAATCATAGCTTTAATTCTATTCATTCTCCTCCTTCGTGCCGCTCTT
GTTTTCTTCTTTCTGATCCTTCTCTTTGCATTTTGCTCAGACTTCGTTCA
CCTTTTTCTGGATCTTTGTTCAGTATAATAGTGCAGTGGGAACACAATGA
TTCCAGGAATCAGATCACAAAACAAAATAATCGGATGGGAACATCAATCC
CACAACCGACACTGAGATTCCTGACATCTGGGATCAGCAAGAGAATAATA
TGGAACACTAAAGATGCTATTCGTACTCATAGACTCCCCCTTCGCACTCG
TTCTCCTTTTCGTTCTTTTCATAATCCTCTTTCGCTACTCTTTCCTCTTC
CTCCTCCTCATTCTTTTCTTTCTCCTCTGCTCAGACCTCCTCCTCGTTTT
CTCTGCAACATGACTGACACTCAATCTCCTCCCGCCAAAACGGTGAGGGT
TGTTGTAAAAGGCAGGGTGCAGGGTGTGTTCTACAGGAACTGGACCATAG
AGAATGCCACACAATTAGGGTTGAGAGGTTGGGTGCGGAACAGGCGTGAT
GGTTCTGTAGAGGCTCTGTTTTCAGGGAACCCTGATTCTGTCAAAGAGAT
GGAGCAGAGGTGCCGCCATGGCCCACCAGATGCTGTAGTTACAGGGCTCC
AGGTCTTCCCATCCAATGATGATCCTGGTACGGGATTTGTGCGCAAACAA
ACTGTTTGATCAAACTCTGCGTATAGATTACTACTGGTTTCCACTTTAAT
CATGTATACTGCATTCCTTTATACAAGTATTACAATAAACTCTCTTGAGG
AATTATATCTGATGTACCCGCAGTTGCTTCTTTATCTTGTTGGACTACGT
GTTACTGGATGACTTGTTACATTTGTGATATATTATTATCATTTTCTTGA
ACAAAAAAAAAAAAAAAAAAAAAAAA
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