CK934467

Overview
NameCK934467
Unique NameCK934467
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12923 contig Csv1_Contig12923:1..707. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.721e-64
Identity = 110/181 (60.77%), Postives = 134/181 (74.03%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +L  IISR  FDD+L++RND  CPARGFYTYDAFI AA++FPGFG +G+   RK+EIAAFF QT HETTGGW  AP G Y+WGYCF  E +P S+YC P+  +PC     Y GRGP+QLSWNYNY +C           NNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS
Sbjct:   70 DLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQC--GRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPS 248          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 8.778e-64
Identity = 114/182 (62.64%), Postives = 134/182 (73.63%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            +LG IIS  MFD +L++RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC++ E   P DYC P+  +PC    KY GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA
Sbjct:   79 DLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSA 258          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 242.276 bits (617), Expect = 1.956e-63
Identity = 110/181 (60.77%), Postives = 134/181 (74.03%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCRG--KYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPS 707
            +L  IIS   FDD+L++RND  CPARGFYTY+AFI AA++FPGFG +G+   RK+E+AAFF QT HETTGGW  AP G Y+WGYCF  E +P SDYC+P+  +PC    +Y GRGP+QLSWNYNY  C           NNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI  +W+PS
Sbjct:   85 DLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLC--GRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPS 263          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.956e-63
Identity = 113/182 (62.09%), Postives = 134/182 (73.63%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            +LG IIS  MFD +L++RND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKREIAAFFAQT HETTGGW  AP G YAWGYC++ E   P DYC P+  +PC    KY GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+
Sbjct:   74 DLGSIISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSS 253          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 7.431e-63
Identity = 111/179 (62.01%), Postives = 133/179 (74.30%), Query Frame = 3
Query:  186 KIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            KIISR MFD +L++RN+  CPA+GFYTYDAF+ AA++FP FG +G+  +RKRE+AAF  QT HETTGGWP AP G YAWGYCF+ E +P S+YC   P YPC  GK Y GRGP+QLSWNYNY  C            NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPC--GEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSA 180          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.216e-62
Identity = 112/183 (61.20%), Postives = 133/183 (72.68%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARG-FYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            ++G +IS  MFD +L++RND  C  +  FY+Y+AFI AA++F GFG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYCF+ E   P DYC P+  +PC    KY GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VII  W+PSA
Sbjct:   77 DIGSVISNSMFDQMLKHRNDNACQGKNNFYSYNAFINAARSFGGFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVIIGRWQPSA 257          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 234.958 bits (598), Expect = 3.122e-61
Identity = 115/184 (62.50%), Postives = 134/184 (72.83%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAN 713
            L  +ISRE F+ +L +RND  CPARGFYTYDAFI AA++FP F  +G++  RKREIAAF AQT HETTG  GW  AP G YAWGYC+  E++PPS YC  DPNYPC  GK Y GRGP+QLSWNYNY +C           NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++
Sbjct:   52 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC--GRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSS 232          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 3.122e-61
Identity = 115/184 (62.50%), Postives = 134/184 (72.83%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTG--GWPDAPGGEYAWGYCFISEVSPPSDYC--DPNYPCR-GK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSAN 713
            L  +ISRE F+ +L +RND  CPARGFYTYDAFI AA++FP F  +G++  RKREIAAF AQT HETTG  GW  AP G YAWGYC+  E++PPS YC  DPNYPC  GK Y GRGP+QLSWNYNY +C           NNPDLL++DP +SFKSA WFWMT Q PKPSCH VII  W PS++
Sbjct:   74 LTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQC--GRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSS 254          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 4.078e-61
Identity = 113/181 (62.43%), Postives = 129/181 (71.27%), Query Frame = 3
Query:  180 LGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDP--NYPC-RGK-YCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            L  II +  FD LL++RND RCPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF  QT HETTGGWPDAP G YAWGYC++ E++    YCDP  NY C  GK YCGRGPIQLSWNYNY  C             P+L+ TDPV+SFK+AIWFWM  Q PKPSCH VI   W PSA
Sbjct:   89 LSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEIN-CQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLC--GDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSA 266          
BLAST of CK934467 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 234.187 bits (596), Expect = 5.325e-61
Identity = 109/182 (59.89%), Postives = 130/182 (71.43%), Query Frame = 3
Query:  177 ELGKIISREMFDDLLEYRNDERCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCFISEVSPPSDYCDPN--YPCR--GKYCGRGPIQLSWNYNYLRCXXXXXXXXXXXNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSA 710
            +LG  IS  MFD +L++RN+  C  + FY+Y+AFI AA++FPGFG SG+   RKREIAAFFAQT HETTGGW  AP G YAWGYCF+ E   P DYC P+  +PC    KY GRGPIQ+S NYNY  C           NNPDL+ATDPV+SFK+A+WFWMT Q PKPSCH+VII  W PS+
Sbjct:   78 DLGSAISNSMFDQMLKHRNENSCQGKNFYSYNAFINAARSFPGFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPC--GRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSS 257          
The following BLAST results are available for this feature:
BLAST of CK934467 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI2_BRANA6.721e-6460.77Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHI1_TOBAC8.778e-6462.64Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHIB_ARATH1.956e-6360.77Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_TOBAC1.956e-6362.09Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHIT_CARPA7.431e-6362.01Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHI4_SOLTU8.216e-6261.20Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI2_GOSHI3.122e-6162.50Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI1_GOSHI3.122e-6162.50Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHI6_POPTR4.078e-6162.43Acidic endochitinase WIN6 OS=Populus trichocarpa G... [more]
CHIT_SOLTU5.325e-6159.89Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004258_F10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_F10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934467 ID=CK934467; Name=CK934467; organism=Citrus sinensis; type=EST; length=715bp
GGGGGAACCAAGCAGAGGATAATTGATATCATAACTNNNNCTTTCAAATG
AGGCTTATTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTACT
AGGAGGCTCAGCACAGAACTGTGGAAGCGGCGTTGTGTACGGTGGACGTG
ATACCGGCCATGGGACGCATGGCGGTGAACTGGGCAAGATCATCTCAAGG
GAGATGTTTGATGACTTGCTTGAGTATAGAAATGATGAACGATGCCCTGC
CAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTC
CAGGCTTTGGTAACTCTGGAAATGAAACCATGCGTAAAAGAGAAATCGCT
GCCTTTTTTGCCCAAACTGGCCATGAAACTACTGGGGGATGGCCCGATGC
ACCTGGTGGCGAATATGCTTGGGGATATTGCTTTATAAGCGAAGTTAGCC
CTCCGTCCGACTACTGTGATCCTAACTATCCATGTCGAGGGAAGTACTGT
GGCCGAGGTCCAATTCAACTCTCTTGGAATTACAATTACTTACGGTGCGG
AGAAGGCCTAGGGCTAGGAGAGGAGTTGTTGAACAATCCAGACCTTCTTG
CTACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGATGACT
GCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGAATGGAA
ACCATCAGCAAATGA
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