CK934514
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK934514 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 9.826e-29 Identity = 64/119 (53.78%), Postives = 73/119 (61.34%), Query Frame = 3 Query: 18 SGXFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXXGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 374 SG NRS S+VPR VLP + FA +G V VN L LQD++C G LKQ GSCCNFLTVLYIGFV AHT+PVLYE++EDEVD YKKLD+GFLS Sbjct: 116 SGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGFLS 234
BLAST of CK934514 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-11 Identity = 39/115 (33.91%), Postives = 57/115 (49.57%), Query Frame = 3 Query: 30 NRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXXGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 374 N++P K+P + E F I + + +N+A +L+ I+ G LK+ G+ NFLT++YI FV HT+P+LYEKHED+VD Y D LS Sbjct: 127 NKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLS 241
BLAST of CK934514 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.425e-11 Identity = 38/119 (31.93%), Postives = 57/119 (47.90%), Query Frame = 3 Query: 18 SGXFNRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXXGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 374 S ++SP +P +P +V + + + +N +L+DI+ G LK+ GS CNFLT++YI V T+PVLYEK+ED+VD Y + D LS Sbjct: 119 STFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLS 237
BLAST of CK934514 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.431e-11 Identity = 37/115 (32.17%), Postives = 58/115 (50.43%), Query Frame = 3 Query: 30 NRSPSKVPRFVLPPEVFANIGTTVCANVNEALGLLQDISCGGKLKQXXXXXXXXXXXXXXGSCCNFLTVLYIGFVAAHTLPVLYEKHEDEVDSXXXXXXXXXXXXYKKLDSGFLS 374 N++ ++P +P E F + +++ +N+A +L+ I+ G LK+ G+ NFLT++YI FV HT+P+LYEKHED+VD Y D LS Sbjct: 127 NKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLS 241 The following BLAST results are available for this feature:
BLAST of CK934514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK934514 ID=CK934514; Name=CK934514; organism=Citrus sinensis; type=EST; length=561bpback to top |