CK934528

Overview
NameCK934528
Unique NameCK934528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length825
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12041 contig Csv1_Contig12041:349..1174. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934528 vs. ExPASy Swiss-Prot
Match: TTHL_ARATH (Uric acid degradation bifunctional protein TTL OS=Arabidopsis thaliana GN=TTL PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.444e-50
Identity = 109/205 (53.17%), Postives = 132/205 (64.39%), Query Frame = 3
Query:    6 TAAEILAELKKRYTNRPIIEFEIAAQEQMKITEXXXXXXXXXXXXXXXXTFQYSATAKTAEEDRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYCPEGFFPYVSIVFEIRESQKREHFHVPLLLSPF 620
            T AE+L  LK+RY NRPI+E EIAA EQMKITE                T   S+   T  +DR+ II GHL  + EA A      P R+R PITTHVLDVS+G+PAAGVEV LE+W G    P F       W   G+S T++DGR G LM +++ LNPG Y+I+F+T KY P  FFPYVSIVF++ ESQK EHFHVPLLL+PF
Sbjct:  119 THAEMLHALKERYENRPIVELEIAAMEQMKITELRMAKLFSDKAKVISETDSSSSPVSTKPQDRLRIIGGHLNVAAEAKA------PKRSRPPITTHVLDVSRGAPAAGVEVHLEVWSGTTG-PSFVHGGGGVWSSVGTSATDRDGRSGPLMDLVDALNPGTYRISFDTAKYSPGCFFPYVSIVFQVTESQKWEHFHVPLLLAPF 316          
BLAST of CK934528 vs. ExPASy Swiss-Prot
Match: HIUH_MOUSE (5-hydroxyisourate hydrolase OS=Mus musculus GN=Urah PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.287e-14
Identity = 50/118 (42.37%), Postives = 66/118 (55.93%), Query Frame = 3
Query:  282 PITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYC----PEGFFPYVSIVFEI-RESQKREHFHVPLLLSPF 620
            P+TTHVLD + G PA G+ +RL             E     W+   +S TN DGRC  L+     + PG YK+ F+T +Y      E F+PYV +VF I +E+QK   FHVPLLLSP+
Sbjct:    7 PLTTHVLDTASGLPAQGLCLRLSRL----------EAPCQQWMELRTSYTNLDGRCPGLL-TPSQIKPGTYKLFFDTERYWKERGQESFYPYVEVVFTITKETQK---FHVPLLLSPW 110          
BLAST of CK934528 vs. ExPASy Swiss-Prot
Match: HIUH_DANRE (5-hydroxyisourate hydrolase OS=Danio rerio GN=urah PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.322e-13
Identity = 52/147 (35.37%), Postives = 72/147 (48.98%), Query Frame = 3
Query:  192 DRVSIIEGHLCASTEASAGKISQIPTRTRLPITTHVLDVSQGSPAAGVEVRLEMWKGIQPRPLFGETDVSGWVYQGSSTTNKDGRCGQLMGMIEDLNPGFYKITFNTGKYC----PEGFFPYVSIVFEIRESQKREHFHVPLLLSPF 620
            +R+  I GH+      SA K   +      P++THVL+++QG P A + + L     +           S W    +  TN DGRC  L+   E+   G YK+ F TGKY        F+PYV IVF I  +   +H+HVPLLLS F
Sbjct:    2 NRLQHIRGHI-----VSADKHINMSATLLSPLSTHVLNIAQGVPGANMTIVLHRLDPVS----------SAWNILTTGITNDDGRCPGLITK-ENFIAGVYKMRFETGKYWDALGETCFYPYVEIVFTITNTS--QHYHVPLLLSRF 130          
The following BLAST results are available for this feature:
BLAST of CK934528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TTHL_ARATH2.444e-5053.17Uric acid degradation bifunctional protein TTL OS=... [more]
HIUH_MOUSE6.287e-1442.375-hydroxyisourate hydrolase OS=Mus musculus GN=Ura... [more]
HIUH_DANRE5.322e-1335.375-hydroxyisourate hydrolase OS=Danio rerio GN=urah... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004258_B03 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10004_IF_B03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934528 ID=CK934528; Name=CK934528; organism=Citrus sinensis; type=EST; length=825bp
GGGGGACGGCTGCCGAAATACTTGCTGAGTTGAAGAAACGATACACAAAC
AGGCCCATAATTGAGTTTGAGATTGCTGCTCAGGAGCAAATGAAAATAAC
TGAATTACGTCTGGCAAAGCTCTTCTCAGCTAAAGCAAAAGCTTCTTCTG
CAACTTTCCAGTATTCTGCAACTGCAAAAACAGCAGAAGAAGATCGTGTG
AGCATCATAGAAGGACACCTATGTGCTTCTACTGAAGCTTCAGCAGGGAA
AATATCTCAAATCCCTACAAGAACTCGACTACCAATTACAACACATGTCT
TGGATGTTTCTCAAGGGTCTCCAGCTGCGGGTGTTGAGGTACGTTTGGAA
ATGTGGAAGGGCATCCAACCACGCCCCCTCTTTGGCGAAACAGATGTCAG
TGGGTGGGTGTACCAGGGGTCTTCAACTACAAATAAAGATGGACGATGTG
GTCAATTGATGGGCATGATTGAAGACTTGAACCCTGGATTTTACAAGATA
ACTTTCAACACTGGTAAATACTGTCCAGAAGGATTTTTTCCCTATGTTTC
TATTGTGTTTGAGATCAGGGAGTCACAAAAGCGAGAACATTTTCATGTTC
CTCTGCTGCTCTCACCATTCCATTCACTACCTATCGTGGAAGCTAGAATT
GTATGGTTGGTTTGTTGACTAATAGAAACATTGTGTGCTTGTGTTGCAAA
TATTCAATAGGGTTGGTCATGGCTGTGGTTATGTGGTTTAATTTAGCCAT
TGTTATTTATTGAACAAAAAAAAAAAGGATGTTATTTTAAGATTTTAAAA
AAAAAAAAAAAAAAAAAAAAAAAAA
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