CK934539

Overview
NameCK934539
Unique NameCK934539
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1697 contig Csv1_Contig1697:1..702. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 5.437e-34
Identity = 61/94 (64.89%), Postives = 77/94 (81.91%), Query Frame = 3
Query:  186 YTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINAM 467
            Y VG SGGW+FN  SW KGKRF+AGD L+FNY+P +HNVV VN+ G+ +C  P GAKVY+SG+D+IKL +GQ++FICN  GHC SGMKIA+NA+
Sbjct:    3 YVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKVYTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96          
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=At2g02850 PE=1 SV=2)

HSP 1 Score: 135.961 bits (341), Expect = 1.934e-31
Identity = 61/97 (62.89%), Postives = 71/97 (73.20%), Query Frame = 3
Query:  177 ATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINAM 467
            A TYTVGDSG W+FN   W KGK F+AGD LVFNY+P +HNVV V+   Y +C  P GAK Y+SGKDRI L +GQNFFICN   HC S MKIA+ A+
Sbjct:   33 AATYTVGDSGIWTFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVTAV 129          
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 8.982e-29
Identity = 54/97 (55.67%), Postives = 70/97 (72.16%), Query Frame = 3
Query:  174 DATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVRGQNFFICNSAGHCGSGMKIAINA 464
            ++  YTVGD GGW+F  + W  GK F+AGD LVF Y+P +HNVV+V   GY+SCTA  G++V+ SG DRI L RG N+FIC+  GHC  G+KIA+ A
Sbjct:   29 ESVVYTVGDGGGWTFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGGLKIAVTA 125          
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 5.112e-16
Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 3
Query:  177 ATTYTVGDSGGWS----FNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 458
            AT + VGDS GW+    ++ A WA   +F  GD+L+FNY+   HNV+ V++  ++SC +   A  Y+SG D I L R G  +F+C   GHC  G K+ I
Sbjct:    1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99          
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.382e-15
Identity = 41/97 (42.27%), Postives = 56/97 (57.73%), Query Frame = 3
Query:  177 ATTYTVGDSGGWSF--NMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKLVR-GQNFFICNSAGHCGSGMKIAI 458
            AT YTVGD+ GW    + ++WA  K F  GD+LVFNY    H V  V  + Y+SCT+       S+G   I L + G+++FIC   GH   GMK++I
Sbjct:   24 ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120          
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: STEL_RHUVE (Stellacyanin OS=Rhus vernicifera PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.259e-14
Identity = 42/102 (41.18%), Postives = 50/102 (49.02%), Query Frame = 3
Query:  180 TTYTVGDSGGWSFNMAS-------WAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKL-VRGQNFFICNSAGHCGSGMKIAIN 461
            T YTVGDS GW             WA  K F  GD LVF YD   HNV  V +  Y+SC        Y++G +RI L   GQ ++IC    HC  G K+ IN
Sbjct:    1 TVYTVGDSAGWKVPFFGDVDYDWKWASNKTFHIGDVLVFKYDRRFHNVDKVTQKNYQSCNDTTPIASYNTGBBRINLKTVGQKYYICGVPKHCDLGQKVHIN 102          
BLAST of CK934539 vs. ExPASy Swiss-Prot
Match: BCB2_ARATH (Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12
Identity = 40/100 (40.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  177 ATTYTVGDSGGWSFNMASWAKGKRFKAGDTLVFNYDPTLHNVVAVNRAGYRSCTAPGGAKVYSSGKDRIKL-VRGQNFFICNSAGHC--GSGMKIAINAM 467
            A TYT+  + G  ++   WA GK F+ GD L F Y  + H V  V++AGY  C A    + +S G  +I L   G N+FIC++ GHC    GMK+A+N +
Sbjct:   29 AVTYTIEWTTGVDYS--GWATGKTFRVGDILEFKYGSS-HTVDVVDKAGYDGCDASSSTENHSDGDTKIDLKTVGINYFICSTPGHCRTNGGMKLAVNVV 125          
The following BLAST results are available for this feature:
BLAST of CK934539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
BABL_CUCSA5.437e-3464.89Basic blue protein OS=Cucumis sativus PE=1 SV=1[more]
BABL_ARATH1.934e-3162.89Basic blue protein OS=Arabidopsis thaliana GN=At2g... [more]
BABL_LILLO8.982e-2955.67Chemocyanin OS=Lilium longiflorum PE=1 SV=1[more]
MAVI_CUCPE5.112e-1641.41Mavicyanin OS=Cucurbita pepo PE=1 SV=1[more]
BCP_PEA7.382e-1542.27Blue copper protein OS=Pisum sativum PE=2 SV=1[more]
STEL_RHUVE1.259e-1441.18Stellacyanin OS=Rhus vernicifera PE=1 SV=1[more]
BCB2_ARATH4.479e-1240.00Uclacyanin-2 OS=Arabidopsis thaliana GN=At2g44790 ... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004229_H10 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone P38DAB10002_IVF_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK934539 ID=CK934539; Name=CK934539; organism=Citrus sinensis; type=EST; length=702bp
GGGGACATAACACTCCTGTGTCTAGAACATTTAAGTTCTCTCACTCTCAG
CTAGCTAGGTAATTTAGTTAACTTTCTGCTTAGAGAATGTCCCAGGGAAG
AGGCAGTGCTAGATGTGCCACTATCGTGGCTGCACTTCTAATTTGCCTGC
TGCTGGTTTACATCGAAATTGTTGATGCAACAACCTACACTGTTGGAGAC
TCTGGTGGTTGGAGTTTCAATATGGCTAGTTGGGCGAAAGGGAAGCGCTT
CAAAGCTGGAGACACTCTCGTCTTCAATTACGATCCAACGCTCCACAATG
TGGTAGCCGTGAACAGAGCAGGTTACCGCAGCTGCACAGCTCCGGGAGGG
GCAAAAGTGTACAGCTCAGGGAAGGATCGCATAAAGTTGGTGAGGGGGCA
GAACTTCTTCATTTGCAACTCTGCTGGGCACTGTGGATCTGGCATGAAGA
TTGCTATTAATGCCATGTAATAAATTGTGAGATGAGTTAATTAGCACGGC
CTAAGGAAAAACTCTCTCTAGCTAATAACTATTAATTAGCTTTTACGTAT
TCCTTGCTCAATTATAAGATTTTTCTCGTCTTGTCAAACCTATTGTATGC
TGCTACTGCTTGTTTATGTTCCTTTGTAGCTCCTGATAAGATTTTTCTTA
TGAATGATTTTTAATTTGTATTAAAAAAAAAAAAAAAAAAANNNAAAAAA
AA
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