EY755894

Overview
NameEY755894
Unique NameEY755894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5839 contig Csv1_Contig5839:201..867. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSKP_SPIOL (Cysteine synthase, chloroplastic/chromoplastic OS=Spinacia oleracea GN=CYSK PE=1 SV=2)

HSP 1 Score: 165.236 bits (417), Expect = 2.679e-40
Identity = 82/104 (78.85%), Postives = 93/104 (89.42%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQP 335
            KP  +KIQG+GAGFVP NLD GV+DEVIEVSS+EAVE+AKQLA++EGLLVGISSG      + +GKRPENAGKLIAVVFPSFGERYLSS+LFQSIREECENM+P
Sbjct:  279 KPGPHKIQGLGAGFVPSNLDLGVMDEVIEVSSEEAVEMAKQLAMKEGLLVGISSGAAAAAAVRIGKRPENAGKLIAVVFPSFGERYLSSILFQSIREECENMKP 382          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSKP_SOLTU (Cysteine synthase, chloroplastic/chromoplastic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.125e-38
Identity = 79/104 (75.96%), Postives = 90/104 (86.54%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQP 335
            KP  +KIQGIGAGF+P NLD+ V+DEVIE+SSDEAVE A+ LALQEGLLVGISSG      ++VGKRPENAGKLI VVFPS+GERYLSS+LFQSIREECE M+P
Sbjct:  281 KPGPHKIQGIGAGFIPGNLDQDVMDEVIEISSDEAVETARTLALQEGLLVGISSGAAALAAIQVGKRPENAGKLIGVVFPSYGERYLSSILFQSIREECEKMKP 384          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSKP_ARATH (Cysteine synthase, chloroplastic/chromoplastic OS=Arabidopsis thaliana GN=OASB PE=1 SV=2)

HSP 1 Score: 154.451 bits (389), Expect = 4.728e-37
Identity = 77/104 (74.04%), Postives = 88/104 (84.62%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQP 335
            KP  +KIQGIGAGFVP+NLD  ++DE I +SS+EA+E +KQLALQEGLLVGISSG      ++V KRPENAGKLIAVVFPSFGERYLS+ LFQSIREECE MQP
Sbjct:  287 KPGPHKIQGIGAGFVPKNLDLAIVDEYIAISSEEAIETSKQLALQEGLLVGISSGAAAAAAIQVAKRPENAGKLIAVVFPSFGERYLSTQLFQSIREECEQMQP 390          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSKM_ARATH (Cysteine synthase, mitochondrial OS=Arabidopsis thaliana GN=OASC PE=1 SV=3)

HSP 1 Score: 152.14 bits (383), Expect = 2.347e-36
Identity = 75/104 (72.12%), Postives = 89/104 (85.58%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQP 335
            KP  +KIQGIGAGF+P+NLD+ ++DEVI +SS+EA+E AKQLAL+EGL+VGISSG      ++V KRPENAGKLIAVVFPSFGERYLS+ LFQSIREE E MQP
Sbjct:  325 KPGPHKIQGIGAGFIPKNLDQKIMDEVIAISSEEAIETAKQLALKEGLMVGISSGAAAAAAIKVAKRPENAGKLIAVVFPSFGERYLSTPLFQSIREEVEKMQP 428          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSKP_CAPAN (Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 7.549e-35
Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 3
Query:   42 IQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQP 335
            + G   GF+P NLD+ V+DEVIE+SSDEAVE AKQLALQEGLLVGISSG      ++V KRPENAGKLIAVVFPSFGERYLSS+LFQSIREECE M+P
Sbjct:  275 LSGGKPGFIPGNLDQDVMDEVIEISSDEAVETAKQLALQEGLLVGISSGAAALAAIQVAKRPENAGKLIAVVFPSFGERYLSSILFQSIREECEKMKP 372          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK2_ORYSJ (Cysteine synthase OS=Oryza sativa subsp. japonica GN=RCS3 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.574e-32
Identity = 70/102 (68.63%), Postives = 83/102 (81.37%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            +P  +KIQGIGAGFVP  LD  +LDEV++VSSDEA+ +AKQLAL+EGLLVGISSG      + V +RPEN GKL+ VVFPSFGERYLSSVLF+SI+ E ENM
Sbjct:  220 RPGPHKIQGIGAGFVPGVLDVNLLDEVVQVSSDEAISMAKQLALKEGLLVGISSGAAAVAAIRVAQRPENKGKLVVVVFPSFGERYLSSVLFESIKREAENM 321          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_MAIZE (Cysteine synthase OS=Zea mays PE=1 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.580e-32
Identity = 71/106 (66.98%), Postives = 83/106 (78.30%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQPVP 341
            KP  +KIQGIGAGF+P  LD  +LDE ++VSSDEA+E AK LAL+EGLLVGISSG      + + KRPENAGKL  VVFPSFGERYLSSVLFQSI++E E+M   P
Sbjct:  220 KPGPHKIQGIGAGFIPGVLDVDLLDETLQVSSDEAIETAKALALKEGLLVGISSGAAAAAAVRLAKRPENAGKLFVVVFPSFGERYLSSVLFQSIKKEAESMVVEP 325          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_SOLTU (Cysteine synthase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.981e-32
Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENMQPVP 341
            KP  +KIQGIGAGF+P  L+  ++D+V++VSS+E++E+AK LAL+EGLLVGISSG      ++V KRPENAGKLI V+FPSFGERYLSSVLF+++R E ENM   P
Sbjct:  220 KPGPHKIQGIGAGFIPGVLEVNLIDDVVQVSSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGERYLSSVLFETVRREAENMTVEP 325          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_SPIOL (Cysteine synthase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.020e-31
Identity = 66/102 (64.71%), Postives = 84/102 (82.35%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQG+GAGF+P  LD  ++DEV+++SS+E++E+AK LAL+EGLLVGISSG      ++V KRPENAGKLI  VFPSFGERYLSSVLF S+R+E E+M
Sbjct:  220 KPGPHKIQGLGAGFIPGVLDVNIIDEVVQISSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVAVFPSFGERYLSSVLFDSVRKEAESM 321          
BLAST of EY755894 vs. ExPASy Swiss-Prot
Match: CYSK_WHEAT (Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.333e-31
Identity = 68/102 (66.67%), Postives = 83/102 (81.37%), Query Frame = 3
Query:   24 KPVSYKIQGIGAGFVPRNLDEGVLDEVIEVSSDEAVEIAKQLALQEGLLVGISSGXXXXXXMEVGKRPENAGKLIAVVFPSFGERYLSSVLFQSIREECENM 329
            KP  +KIQGIGAGF+P  LD  ++DE I+VSSDE++E+AK LAL+EGLLVGISSG      ++V +RPENAGKL  VVFPSFGERYLSSVLF SI++E E+M
Sbjct:  221 KPGPHKIQGIGAGFIPGVLDVDIIDETIQVSSDESIEMAKSLALKEGLLVGISSGAAAAAAIKVAQRPENAGKLFVVVFPSFGERYLSSVLFHSIKKEAESM 322          
The following BLAST results are available for this feature:
BLAST of EY755894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
CYSKP_SPIOL2.679e-4078.85Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_SOLTU1.125e-3875.96Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKP_ARATH4.728e-3774.04Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSKM_ARATH2.347e-3672.12Cysteine synthase, mitochondrial OS=Arabidopsis th... [more]
CYSKP_CAPAN7.549e-3575.51Cysteine synthase, chloroplastic/chromoplastic OS=... [more]
CYSK2_ORYSJ1.574e-3268.63Cysteine synthase OS=Oryza sativa subsp. japonica ... [more]
CYSK_MAIZE4.580e-3266.98Cysteine synthase OS=Zea mays PE=1 SV=2[more]
CYSK_SOLTU5.981e-3263.21Cysteine synthase OS=Solanum tuberosum PE=2 SV=1[more]
CYSK_SPIOL1.020e-3164.71Cysteine synthase OS=Spinacia oleracea PE=1 SV=1[more]
CYSK_WHEAT1.333e-3166.67Cysteine synthase OS=Triticum aestivum GN=CYS1 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS13-C1-001-001-B04-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY755894 ID=EY755894; Name=EY755894; organism=Citrus sinensis; type=EST; length=667bp
GTCGAACAGACCCACGCGTCCGAAAGCCTGTTTCCTACAAGATTCAAGGG
ATTGGAGCAGGTTTTGTTCCTAGGAATTTGGATGAGGGTGTGCTTGATGA
AGTCATTGAGGTATCTAGTGATGAAGCTGTTGAAATTGCAAAGCAGTTAG
CACTCCAGGAAGGCTTGCTGGTTGGCATATCTTCTGGGGCGGCAGCTGCT
GCAGCAATGGAGGTTGGGAAGAGACCTGAGAATGCTGGAAAGCTTATTGC
AGTTGTGTTTCCGAGCTTTGGAGAACGATACCTCTCATCCGTTCTTTTCC
AGTCAATCCGAGAAGAATGTGAGAACATGCAGCCTGTGCCGTGAAATTCA
ACTCTTCGAGATTTATTGAAAATGCAAAGCTTATTTTTCTGTCTTCCATA
GACATTGGCATACATTTTGCTTTTGTTTTAGTCAGTATCTTCTGTTTTTG
TGTACATCCACTTGTAGGATCCTAATTATAGTTATGTCCATTCATGACTG
TTAAGTCCTTTTTTAAGAAGGAAAATCCTGTTATTTGTGGAATTCATCTT
AGGGGTGGAATTTGTGATTACATTTCTCTTCTGTAATTGATGTGCTTTAG
CTTAATTTTAAAATGTTAAAGACATGGGAAGTGATTAGTGAAAAAAAAAA
AAAAAAAAAAAAAAAAA
back to top