EY728236

Overview
NameEY728236
Unique NameEY728236
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (5 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2)

HSP 1 Score: 347.821 bits (891), Expect = 4.796e-95
Identity = 186/277 (67.15%), Postives = 209/277 (75.45%), Query Frame = 3
Query:   15 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLK-------AAIYRTMLVITIIT*RKTSMLGKGTLNVRQSSKKRLPKIKANPRCQRLRRKLGRNRN-AGLSSSETKSKGSKMAK 821
            SGRSVVT+KNL FG++D++LFN+ANL IERGEK AIIGPNGCGKSTLLKLIMGLEKP  GEV+LGEHNVLPNYFEQNQAEA DLDKTV+ETV EAA DWRIDDIK LLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIP KEMLEEAI+EYKGTVITVSHDRYF+KQIV     ++       A  Y   L        K        L      +++ PK+KA  +  +  R+  + +      +S+ KSK SK AK
Sbjct:  406 SGRSVVTVKNLVFGFDDKMLFNKANLAIERGEKVAIIGPNGCGKSTLLKLIMGLEKPMRGEVILGEHNVLPNYFEQNQAEAQDLDKTVIETVVEAAVDWRIDDIKALLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYFL-------EKNVEARARELEREAELEEKAPKVKAKSKMSKAEREARKKQKMKAFQASKKKSKSSKNAK 675          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 2.228e-92
Identity = 177/273 (64.84%), Postives = 205/273 (75.09%), Query Frame = 3
Query:    6 RPRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLKAAIYRTMLVITIIT*RKTSMLGKGTLNVRQSSKKRLPKIKANPRCQRLRRKLGRNRN-AGLSSSETKSKGSKMAK 821
            R  SGRSVV +KN++FG+ED++LF +ANL+IERGEK AI+GPNGCGKSTLLKLIMGLEKP  GEV+LGEHNVLPNYFEQNQAE LDLDKTVLETV EAAEDWR DDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMV PSTLLVLDEPTNHLDIP KEMLEEAI+EY+GTVI VSHDRYF+KQIV     ++                K        L      +++ PK+KA  +  +  ++  + +       ++ KSK SK +K
Sbjct:  417 RGTSGRSVVNVKNIDFGFEDKMLFKKANLSIERGEKIAILGPNGCGKSTLLKLIMGLEKPVKGEVILGEHNVLPNYFEQNQAEVLDLDKTVLETVCEAAEDWRSDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVTPSTLLVLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKNLDARTKELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQQAKQKSKASKNSK 689          

HSP 2 Score: 72.0182 bits (175), Expect = 5.107e-12
Identity = 41/85 (48.24%), Postives = 51/85 (60.00%), Query Frame = 2
Query:  578 NRVVEVKGSNLQDYACDYNYYLEKNXXXXXXXXXXXXXXXXKASKNQGQSXMSKAEKEARKKQKCRPFKQ-RNKIKRLEDGKNGN 829
            NRV+EV+   L+DYA DYNYYLEKN                KA K + +S MSKAEKEARKKQK + F+Q + K K  ++ K  N
Sbjct:  608 NRVIEVEDGCLEDYAGDYNYYLEKNLDARTKELEREAELEEKAPKVKAKSKMSKAEKEARKKQKMQAFQQAKQKSKASKNSKRWN 692          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2)

HSP 1 Score: 147.902 bits (372), Expect = 7.283e-35
Identity = 90/242 (37.19%), Postives = 137/242 (56.61%), Query Frame = 3
Query:   12 RSGRSVVTIKNLEFGYEDRL-LFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLKAA-IYRTMLVITIIT*RKTSMLGKGTLNVRQSSKKRLPKIKANPR 731
            +SG  V+ +++L   YE++  L    +  + RGE  A++GPNG GKSTLLK ++   KP  G +  G  NV   Y++Q QAE L   K VL+ + +        +I+  LG   F  D + + V  LSGGEKARLA  K M++ +  L+LDEPTNHLD+  KE+LE A+ +Y GT++ VSHDRYF+ +I      L ++ I   +      T +KT  L    +N ++ + K    +K++ +
Sbjct:  321 QSGNEVLRVQDLTISYENQPPLLTEVSFMLTRGESAALVGPNGIGKSTLLKTLIDTLKPDQGTISYGS-NVSVGYYDQEQAE-LTSSKRVLDELWDEYPGLPEKEIRTCLGNFLFSGDDVLKPVHSLSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYTEKKTEQLELEKMNQQEETDKTPATVKSDSK 560          

HSP 2 Score: 93.5893 bits (231), Expect = 1.630e-18
Identity = 64/233 (27.47%), Postives = 104/233 (44.64%), Query Frame = 3
Query:   27 VVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVL---------LGEHNVLPNYFEQNQA--------EALDLDKTVLETVAEAAEDWRID-----------------------DIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLKAA 605
            ++ +  L   +    + N   L +   ++ AI+G NG GKSTLLK+I G      GE++         L +H  L +     +         +A++ +   +E    AA+   ++                       D++ +L    F       +V  LSGG+K RLA  K ++    LL+LDEPTNHLDI     LE  +  Y G ++ VSHDRYF+ ++V + + +  A
Sbjct:    3 ILQVNQLSKSFGADTILNNIKLEVRNRDRIAIVGRNGAGKSTLLKIIAGQLSYEKGEIIKPKDITMGYLAQHTGLDSKLTIKEELLTVFDHLKAMEKEMRAMEEKMAAADPGELESIMKTYDRLQQEFKDKGGYQYEADVRSVLHGLGFSHFDDSTQVQSLSGGQKTRLALGKLLLTQPDLLILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRA 235          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UUP1_HAEIN (ABC transporter ATP-binding protein uup-1 OS=Haemophilus influenzae GN=uup-A PE=3 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 1.293e-34
Identity = 78/198 (39.39%), Postives = 121/198 (61.11%), Query Frame = 3
Query:    3 TRPRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK----GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE 584
            T  RSG+ V  ++++ +    + L    + TI RG+K A++GPNGCGK+T +KL++G  +P  G++  G    +  YF+Q +A+ LD +KTV++ VA+  +D  I+ +K    G L    F        V  LSGGE+ RL   K ++KP+ LL+LDEPTN LD+   E+LEE +++Y+GT++ VSHDR F+     E
Sbjct:  311 TSSRSGKIVFEMEDVSYEIAGKTLLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSGKIRCGTKLEIA-YFDQYRAD-LDPEKTVMDNVADGKQDIEINGVKRHVLGYLQDFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEILTDYQGTLLIVSHDRQFIDNTATE 506          

HSP 2 Score: 24.6386 bits (52), Expect = 1.293e-34
Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  704 ASKNQGQSXMSKAEKEARKKQKCRPFKQRNKIK 802
            A + Q     SKA +E  K +K  P K+ + +K
Sbjct:  526 AKQQQANFWASKAVEEQAKAKKSEPLKEESAVK 558          

HSP 3 Score: 89.3521 bits (220), Expect = 3.074e-17
Identity = 81/337 (24.04%), Postives = 149/337 (44.21%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMG---------------------LEKPRGGEV---------------LLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQI---VIE*WRLKAAIYRTMLVITIIT*RKT------------SMLGKGTLNVRQSSKKRLPKIKANPRCQRLRRKLGRNRNAGLSSS----ETKSKGSKMAKMEMKDNPYICEGNPL 866
            +++++ N    + D  L + A L IE  E   ++G NG GKSTLLK+I G                      + PR  +                LL E++ +    E+N ++ +      ++   E A+ WR ++ I  +L +     +    K+S LSGG   + A  + +V    +L+LDEPTNHLD+   E LE  + +++G+++ +SHDR F++++   +++  R +   Y     + + T  +               L +  + +RQ  K R  + +   R  ++ R+  R R   + ++    +T S+  K+   EM+D  Y   G  L
Sbjct:    2 ALISLTNGYLSFSDAPLLDHAELHIEPNECVCLVGRNGAGKSTLLKIIAGDVLMDDGKIQYEKDLVVSRLEQDPPRNAQGNIFDYVAEGVGHLTDLLKEYHQISVQLEENYSDQILSQLEQVQAKLEHADGWRFENKINEVLLKLGLNPNT---KLSALSGGWLRKAALARALVCDPDVLLLDEPTNHLDVEAIEWLENFLLDFQGSIVFISHDRSFIRKMATRIVDLDRGQLVSYPGNYDLYLTTKEENLRVEALQNELFDKRLAQEEVWIRQGIKARRTRNEGRVRALKVMREERRQRRDVMGTAKLQLDTSSRSGKIV-FEMEDVSYEIAGKTL 334          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UUP2_HAEIN (ABC transporter ATP-binding protein uup-2 OS=Haemophilus influenzae GN=uup-B PE=3 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.737e-34
Identity = 77/198 (38.89%), Postives = 120/198 (60.61%), Query Frame = 3
Query:    3 TRPRSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIK----GLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE 584
            T  RSG+ V  ++++ +    + L    + TI RG+K A++GPNGCGK+T +KL++G  +P  G++  G    +  YF+Q +A+ LD +K V++ VA+  +D  I+ +K    G L    F        V  LSGGE+ RL   K ++KP+ LL+LDEPTN LD+   E+LEE +++Y+GT++ VSHDR F+     E
Sbjct:  123 TSSRSGKIVFEMEDVSYEIAGKTLLKDFSTTILRGDKIALVGPNGCGKTTFIKLLLGEIQPTSGKIRCGTKLEIA-YFDQYRAD-LDPEKIVMDNVADGKQDIEINGVKRHVLGYLQEFLFPPKRAMTPVKALSGGERNRLLLAKLLLKPNNLLILDEPTNDLDVETLELLEEILTDYQGTLLIVSHDRQFIDNTATE 318          

HSP 2 Score: 24.6386 bits (52), Expect = 3.737e-34
Identity = 11/33 (33.33%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  704 ASKNQGQSXMSKAEKEARKKQKCRPFKQRNKIK 802
            A + Q     SKA +E  K +K  P K+ + +K
Sbjct:  338 AKQQQANFWASKAVEEQAKAKKSEPLKEESAVK 370          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YFMM_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmM OS=Bacillus subtilis GN=yfmM PE=3 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 1.519e-32
Identity = 79/196 (40.31%), Postives = 113/196 (57.65%), Query Frame = 3
Query:   15 SGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*WRLKA 602
            SG+ +   K+L  GY D  L    NL +ERG+K A+ G NG GK+TLLK ++G  +P  G V  GEH +   YFEQ   E  +   T +E V      +   +I+  L +C      ++ +VS+LSGGEKA++  CK +   + LLVLDEPTNHLD   KE L+ A+ EYKG+++ +SH+  F   I  E W  ++
Sbjct:  321 SGKLIFETKDLVIGY-DSPLSRPLNLRMERGQKIALYGANGIGKTTLLKSLLGEIQPLEGSVERGEH-IYTGYFEQEVKETNN--NTCIEEVWSEFPSYTQYEIRAALAKCGLTTKHIESRVSVLSGGEKAKVRLCKLINSETNLLVLDEPTNHLDADAKEELKRALKEYKGSILLISHEPDFYMDIATETWNCES 512          

HSP 2 Score: 92.0485 bits (227), Expect = 4.743e-18
Identity = 64/229 (27.95%), Postives = 111/229 (48.47%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEV---------LLGEHNVLPN-------------------------YFEQNQAEALDLDKTVLETVAEAAE----------DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIV 578
            S++++K+L  G+ DR +FN  +  + +GE   +IG NG GKST + +I G  +P  G+V          L +H VL                           Y +  +A+  +L+K +LE V    +          D ++++I   LG  +     L+R V+ LSGG++ ++   K +++   +L+LDEPTN+LD    E L+  + EY+   I +SHD  F+  ++
Sbjct:    2 SILSVKDLSHGFGDRAIFNNVSFRLLKGEHVGLIGANGEGKSTFMNIITGKLEPDEGKVEWSKNVRVGYLDQHTVLEKGKSIRDVLKDAFHYLFAMEEEMNEIYNKMGEADPDELEK-LLEEVGVIQDALTNNDFYVIDSKVEEIARGLGLSDIG---LERDVTDLSGGQRTKVLLAKLLLEKPEILLLDEPTNYLDEQHIEWLKRYLQEYENAFILISHDIPFLNSVI 226          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UUP_ECOLI (ABC transporter ATP-binding protein uup OS=Escherichia coli (strain K12) GN=uup PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 1.983e-32
Identity = 81/197 (41.12%), Postives = 118/197 (59.90%), Query Frame = 3
Query:   12 RSGRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD----IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*W 590
            RSG+ V  ++++ +    + L    +  + RG+K A+IGPNGCGK+TLLKL++G  +   G + +G    +  YF+Q++AE LD DKTV++ +AE  ++  ++     + G L    F        V  LSGGE+ RL   +  +KPS LL+LDEPTN LD+   E+LEE I  Y+GTV+ VSHDR FV   V E W
Sbjct:  314 RSGKIVFEMEDVCYQVNGKQLVKDFSAQVLRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHVGTKLEVA-YFDQHRAE-LDPDKTVMDNLAEGKQEVMVNGKPRHVLGYLQDFLFHPKRAMTPVRALSGGERNRLLLARLFLKPSNLLILDEPTNDLDVETLELLEELIDSYQGTVLLVSHDRQFVDNTVTECW 508          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: UUP_BUCAI (ABC transporter ATP-binding protein uup OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=uup PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.333e-31
Identity = 74/195 (37.95%), Postives = 119/195 (61.03%), Query Frame = 3
Query:   18 GRSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAE----DWRIDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQIVIE*W 590
            G+ +  + N++F   ++++    +  I+ G+K A+IG NGCGKSTL+K+I+G  KP+ G++ +G+  +  +YF+QN++  L+ +K+++E +    E    + R   I   L    FK + L   V  LSGGE  RL   +  +KPS +L+LDEPTN LD+   ++LE+ I  YKGTVI VSHD+ F+K    + W
Sbjct:  286 GKIIFKLDNIDFLVNNKIIIKNFSSIIQHGDKLALIGDNGCGKSTLIKIIIGENKPQKGKIYIGK-GLKISYFDQNRS-FLNPNKSIIENIDYGKEKILLNSREQHIIRYLKNFLFKPNQLKSLVKTLSGGECNRLLLAQLFLKPSNVLILDEPTNDLDLDTLQLLEKIIIAYKGTVIIVSHDKTFIKNTAKKCW 478          

HSP 2 Score: 87.8113 bits (216), Expect = 8.945e-17
Identity = 54/193 (27.98%), Postives = 102/193 (52.85%), Query Frame = 3
Query:   24 SVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWR---------IDDIKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            S++ I N    + +  +  ++   I + E+  +IG NG GKSTLLK+I   +    G+++  + N    Y EQN  + L++  ++ + +A   ++           I  I+ ++       + L   +S LSGG   ++A  + +V+   +L+LDEPTNHLD+   + LE  + ++ G+++ VSHDR F++ +
Sbjct:    2 SLINIHNASLSFSNLQILEKSTFHINKNERVCLIGKNGAGKSTLLKIINKKQDLDEGQIIY-KKNTTTAYLEQNNPKNLNI--SIYDFIALGLKEHEKNKKKHTNEIVKIEKIIELIKLNKNTL---LSHLSGGLLRKVALGRVLVREPDILLLDEPTNHLDMKTIKWLETFLKKFSGSILFVSHDRNFIQNV 188          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YBIT_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli (strain K12) GN=ybiT PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.402e-30
Identity = 72/186 (38.71%), Postives = 111/186 (59.68%), Query Frame = 3
Query:   21 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            R+ + ++ L  G+++  LF   NL +E GEK A++G NG GKSTLLK ++G  +P  G V   E N    Y+ Q+     + D TV E +++  ++   +  ++ +LGR  F  D + +   +LSGGEK R+ F K M++   +L++DEPTNHLD+   E L  A+  Y+GT+I VSHDR FV  +
Sbjct:  317 RNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSE-NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSL 501          
BLAST of EY728236 vs. ExPASy Swiss-Prot
Match: YBIT_ECOL6 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O6 GN=ybiT PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 5.402e-30
Identity = 72/186 (38.71%), Postives = 111/186 (59.68%), Query Frame = 3
Query:   21 RSVVTIKNLEFGYEDRLLFNRANLTIERGEKTAIIGPNGCGKSTLLKLIMGLEKPRGGEVLLGEHNVLPNYFEQNQAEALDLDKTVLETVAEAAEDWRIDD-IKGLLGRCNFKADMLDRKVSLLSGGEKARLAFCKFMVKPSTLLVLDEPTNHLDIPFKEMLEEAISEYKGTVITVSHDRYFVKQI 575
            R+ + ++ L  G+++  LF   NL +E GEK A++G NG GKSTLLK ++G  +P  G V   E N    Y+ Q+     + D TV E +++  ++   +  ++ +LGR  F  D + +   +LSGGEK R+ F K M++   +L++DEPTNHLD+   E L  A+  Y+GT+I VSHDR FV  +
Sbjct:  317 RNALEVEGLTKGFDNGPLFKNLNLLLEVGEKLAVLGTNGVGKSTLLKTLVGDLQPDSGTVKWSE-NARIGYYAQDHEYEFENDLTVFEWMSQWKQEGDDEQAVRSILGRLLFSQDDIKKPAKVLSGGEKGRMLFGKLMMQKPNILIMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSL 501          
The following BLAST results are available for this feature:
BLAST of EY728236 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
AB2F_ARATH4.796e-9567.15ABC transporter F family member 2 OS=Arabidopsis t... [more]
AB5F_ARATH2.228e-9264.84ABC transporter F family member 5 OS=Arabidopsis t... [more]
YDIF_BACSU7.283e-3537.19Uncharacterized ABC transporter ATP-binding protei... [more]
UUP1_HAEIN1.293e-3439.39ABC transporter ATP-binding protein uup-1 OS=Haemo... [more]
UUP2_HAEIN3.737e-3438.89ABC transporter ATP-binding protein uup-2 OS=Haemo... [more]
YFMM_BACSU1.519e-3240.31Uncharacterized ABC transporter ATP-binding protei... [more]
UUP_ECOLI1.983e-3241.12ABC transporter ATP-binding protein uup OS=Escheri... [more]
UUP_BUCAI8.333e-3137.95ABC transporter ATP-binding protein uup OS=Buchner... [more]
YBIT_ECOLI5.402e-3038.71Uncharacterized ABC transporter ATP-binding protei... [more]
YBIT_ECOL65.402e-3038.71Uncharacterized ABC transporter ATP-binding protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-704-001-C03-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728236 ID=EY728236; Name=EY728236; organism=Citrus sinensis; type=EST; length=892bp
CCACGCGTCCGAGAAGTGGTAGATCTGTTGTAACAATTAAGAACCTGGAA
TTTGGATACGAGGATAGACTTCTGTTTAATCGAGCAAATCTCACAATTGA
AAGGGGAGAGAAAACTGCCATCATTGGCCCAAATGGTTGTGGTAAGAGTA
CTTTGCTGAAATTGATAATGGGTTTAGAGAAGCCAAGAGGAGGTGAAGTT
CTGCTTGGTGAGCATAATGTCCTACCAAACTATTTTGAGCAGAATCAGGC
TGAGGCACTTGATTTGGACAAAACAGTACTTGAGACAGTAGCAGAAGCTG
CAGAGGACTGGAGAATTGATGATATAAAGGGCCTCCTTGGTCGTTGTAAT
TTCAAAGCTGACATGCTTGATAGAAAGGTTTCCCTTTTGAGTGGTGGTGA
GAAGGCACGTCTTGCATTTTGCAAATTCATGGTAAAACCATCAACTCTTC
TAGTTTTGGATGAACCAACTAATCACTTGGATATTCCTTTCAAAGAGATG
CTCGAGGAGGCCATATCAGAGTACAAGGGCACAGTAATCACAGTTTCTCA
TGACCGATACTTCGTAAAGCAAATAGTAATAGAGTAGTGGAGGTTAAAGG
CAGCAATTTACAGGACTATGCTTGTGATTACAATTATTACCTAGAGAAAA
ACCTCCATGCTCGGGAAAGGGACCTTGAACGTGAGGCAGAGCTCCAAGAA
AAGGCTTCCAAAAATCAAGGCCAATCCNAGATGTCAAAGGCTGAGAAGGA
AGCTCGGAAGAAACAGAAATGCAGGCCTTTCAAGCAGCGAAACAAAATCA
AAAGGCTCGAAGATGGCAAAAATGGAAATGAAAGATAACCCGTATATATG
CGAAGGAAATCCATTGTACCTAATTTGCTGAGCAAATTCAGG
back to top