GE213148
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.131e-43 Identity = 84/91 (92.31%), Postives = 91/91 (100.00%), Query Frame = -1 Query: 24 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 296 MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IFVFKFRTHFGGGKS+GFGLIYD+V+SA+KFEPKY Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVFKFRTHFGGGKSSGFGLIYDTVESAKKFEPKY 91
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 1.806e-41 Identity = 79/91 (86.81%), Postives = 89/91 (97.80%), Query Frame = -1 Query: 24 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 296 MA+KAVTIRTR FMTNRLL+RKQFVIDVLHPGRANVSKAELKEKLARMY+VKDPN+IF FKFRTHFGGGKS+G+GLIYD+V++A+KFEPKY Sbjct: 1 MAEKAVTIRTRNFMTNRLLARKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFCFKFRTHFGGGKSSGYGLIYDTVENAKKFEPKY 91
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_XENLA (40S ribosomal protein S24 OS=Xenopus laevis GN=rps24 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_RAT (40S ribosomal protein S24 OS=Rattus norvegicus GN=Rps24 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_PONAB (40S ribosomal protein S24 OS=Pongo abelii GN=RPS24 PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_MOUSE (40S ribosomal protein S24 OS=Mus musculus GN=Rps24 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_MESAU (40S ribosomal protein S24 OS=Mesocricetus auratus GN=RPS24 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_HUMAN (40S ribosomal protein S24 OS=Homo sapiens GN=RPS24 PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_BOVIN (40S ribosomal protein S24 OS=Bos taurus GN=RPS24 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 7.118e-30 Identity = 63/86 (73.26%), Postives = 73/86 (84.88%), Query Frame = -1 Query: 24 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 281 VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA+MY P+ IFVF FRTHFGGGK+TGFG+IYDS+D A+K EPK+ Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKT-TPDVIFVFGFRTHFGGGKTTGFGMIYDSLDYAKKNEPKH 89
BLAST of GE213148 vs. ExPASy Swiss-Prot
Match: RS24_DICDI (40S ribosomal protein S24 OS=Dictyostelium discoideum GN=rps24 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 9.296e-30 Identity = 58/91 (63.74%), Postives = 77/91 (84.62%), Query Frame = -1 Query: 24 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYDVKDPNSIFVFKFRTHFGGGKSTGFGLIYDSVDSARKFEPKY 296 M AV +RTRK +TNRLLSRKQFV++V+HPG+ANVSK +LK +A+++ V DP +IF+F F+T FGGGKSTGFGLIYD+++ A+K+EPKY Sbjct: 1 MDKAAVVVRTRKVLTNRLLSRKQFVVEVVHPGKANVSKKDLKTTIAKLHKVADPETIFLFGFKTDFGGGKSTGFGLIYDNLEIAKKYEPKY 91 The following BLAST results are available for this feature:
BLAST of GE213148 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >GE213148 ID=GE213148; Name=GE213148; organism=Citrus sinensis; type=EST; length=398bpback to top |