FE659086

Overview
NameFE659086
Unique NameFE659086
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length347
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5271 contig Csv1_Contig5271:264..610. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FE659086 vs. ExPASy Swiss-Prot
Match: LEA5_CITSI (Late embryogenesis abundant protein Lea5 OS=Citrus sinensis GN=LEA5 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 8.381e-31
Identity = 67/69 (97.10%), Postives = 67/69 (97.10%), Query Frame = -2
Query:    2 MARSLFKAKLLLAPVADGISLSIGRRGYAAAAPLGTISRTGIMEKNDLTPAVREDSGASSAWAPDPITG 208
            MARSLFKAKLLLAPVADGISLSI RRGYAAAAPLGTISRTGIMEKNDL PAVREDSGASSAWAPDPITG
Sbjct:    1 MARSLFKAKLLLAPVADGISLSISRRGYAAAAPLGTISRTGIMEKNDLRPAVREDSGASSAWAPDPITG 69          
The following BLAST results are available for this feature:
BLAST of FE659086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
LEA5_CITSI8.381e-3197.10Late embryogenesis abundant protein Lea5 OS=Citrus... [more]
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Properties
Property NameValue
Genbank descriptionC25 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659086 ID=FE659086; Name=FE659086; organism=Citrus sinensis; type=EST; length=347bp
ACCCAGTGATGGGATCTGGGGCCCAGGCAGAAGAGGCCCCAGAATCCTCT
CTCACCGCAGGCGTCAAATCATTTTTCTCCATGATACCAGTCCGAGATAT
GGTTCCCAAGGGTGCTGCTGCAGCATATCCTCTCCTGCCAATGGAGAGCG
AGATGCCATCAGCAACAGGAGCAAGAAGAAGCTTAGCTTTGAAGAGAGAG
CGGGCCATTGTTTTATTTACTTATAGAACTTAATAGATATGAAGATAGCT
AGCTGGGATGTTTCTGTACAGTGCTACTACAGAAGAAGAAAGATTCTGCT
CCTGCAGTAGCTATAGGCAAAAGCTAGCGGCTCGCTCTCTTTGTGCT
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