EY720038
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY720038 vs. ExPASy Swiss-Prot
Match: UBP53_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 53 OS=Homo sapiens GN=USP53 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 3.086e-22 Identity = 81/293 (27.65%), Postives = 125/293 (42.66%), Query Frame = 3 Query: 15 CALYEIFTALSIASTDTRKEAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTPGSNVSDTESVESNCMGSWDCTNSACIVHSLFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCAE-------SSLDELLNLVEMNHQLACDPGAGGCEKLNYIHHILSTPPHVFTTVLGWQNTCESFDDITATLAALSPEIDI-SILYRGLDPKRRHS---LVSVVCYYGQHYHCFAYSHDQERWIMYDDKTVKXVGS-WSDVLSMCERGTCNLRSFL 857 CAL IF +R++A+ ++R AL+ + D FQ M+DA+E + + +H P + CT+ +CI H F M ++E+ C SCG S L +T F I+ +AL E ELL P C + I +L P + T L W + E D A + L+ + + + YR D ++S LV ++CY QHY FA+ +W+ +DD VK +G+ W DV+S C R C+ + L Sbjct: 76 CALKTIFAQFQ----HSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECFENMLERIHFHIVPSRDADM-------------CTSKSCITHQKFAMTLYEQCVCRSCGASSDPLPFTEFVRYISTTALCNEVERMLERHERFKPEMFAELLQAANTTDDYRKCP--SNCGQKIKIRRVLMNCPEIVTIGLVWDS--EHSDLTEAVVRNLATHLYLPGLFYRVTDENAKNSELNLVGMICYTSQHYCAFAFHTKSSKWVFFDDANVKEIGTRWKDVVSKCIR--CHFQPLL 345
BLAST of EY720038 vs. ExPASy Swiss-Prot
Match: UBP54_MOUSE (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Mus musculus GN=Usp54 PE=1 SV=2) HSP 1 Score: 100.138 bits (248), Expect = 1.693e-20 Identity = 83/287 (28.92%), Postives = 125/287 (43.55%), Query Frame = 3 Query: 15 CALYEIFTALSIASTDTRKEAVAPT-SLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTPGSNVSDTESVESNCMGSWDCTNSACIVHSLFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCAE-------SSLDELL-NLVEMNHQLACDPGAGGCEKLNYIHHILSTPPHVFTTVLGWQNTCESF-DDITATLAALSPEIDISILYRGLDPKRRHS---LVSVVCYYGQHYHCFAYSHDQERWIMYDDKTVKXVG-SWSDVLSMCERG 833 CAL IF +S E V P+ +LR AL+ + D FQ M+DA+E + +H +++D + CT CI H F M +FE+ C SCG S L + H I+ +AL + E S ELL N M C G E++ I +L P + T L W + +D+ +L D+ +R D + + S LV ++CYYG+HY F + +W+ +DD VK +G W DV++ C +G Sbjct: 77 CALKGIFNQFQCSS-----EKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIH------FHIADETKEDI-------CTAQHCISHQKFAMTLFEQCVCSSCGATSDPLPFIQMVHYISTTALCNQAICMLEKREKPSPSMFGELLQNASTMGDLRNCPSNCG--ERIR-IRRVLMNAPQIITIGLVWDSEHSDLAEDVIHSLGTCLKLGDL--FFRVTDDRAKQSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKG 340
BLAST of EY720038 vs. ExPASy Swiss-Prot
Match: UBP54_HUMAN (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Homo sapiens GN=USP54 PE=1 SV=4) HSP 1 Score: 98.9821 bits (245), Expect = 3.772e-20 Identity = 82/287 (28.57%), Postives = 125/287 (43.55%), Query Frame = 3 Query: 15 CALYEIFTALSIASTDTRKEAVAPT-SLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTPGSNVSDTESVESNCMGSWDCTNSACIVHSLFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCAE-------SSLDELL-NLVEMNHQLACDPGAGGCEKLNYIHHILSTPPHVFTTVLGWQNTCESF-DDITATLAALSPEIDISILYRGLDPKRRHS---LVSVVCYYGQHYHCFAYSHDQERWIMYDDKTVKXVG-SWSDVLSMCERG 833 CAL IF +S E V P+ +LR AL+ + D FQ M+DA+E + +H +++D + CT CI H F M +FE+ C SCG S L + H I+ ++L + E S ELL N M C G E++ I +L P + T L W + +D+ +L D+ +R D + + S LV ++CYYG+HY F + +W+ +DD VK +G W DV++ C +G Sbjct: 77 CALKGIFNQFQCSS-----EKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIH------FHIADETKEDI-------CTAQHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLERREKPSPSMFGELLQNASTMGDLRNCPSNCG--ERIR-IRRVLMNAPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDL--FFRVTDDRAKQSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKG 340
BLAST of EY720038 vs. ExPASy Swiss-Prot
Match: UBP53_MOUSE (Inactive ubiquitin carboxyl-terminal hydrolase 53 OS=Mus musculus GN=Usp53 PE=2 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 1.098e-19 Identity = 80/293 (27.30%), Postives = 124/293 (42.32%), Query Frame = 3 Query: 15 CALYEIFTALSIASTDTRKEAVAPTSLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTPGSNVSDTESVESNCMGSWDCTNSACIVHSLFGMDIFERMNCYSCGLESRHLKYTSFFHNINASAL-----RTMK--VMCAESSLDELLNLVEMNHQLACDPGAGGCEKLNYIHHILSTPPHVFTTVLGWQNTCESFDDITATLAALSPEIDI-SILYRGLDPKRRHS---LVSVVCYYGQHYHCFAYSHDQERWIMYDDKTVKXVGS-WSDVLSMCERGTCNLRSFL 857 CAL IF +R++A+ ++R AL+ + D FQ M+DA+E I +H P + CT+ +C+ H F M ++E+ C SCG S L +T I+ +AL R M+ ELL P C + I +L P + T L W + E D + +L+ + + + YR D S LV ++CY +HY FA+ +W+ +DD VK +G+ W DV+S C R C+L+ L Sbjct: 76 CALKTIFAQFQ----HSREKALPSDNIRHALAESFKDEQRFQLGLMDDAAECFENILARIHFHLVPNRDADM-------------CTSKSCVTHQKFAMTLYEQCVCRSCGASSDPLPFTELVRYISTTALCNEVERMMERHERVKPEMFAELLQAANTADDYRKCP--SNCGQKIKIRRVLMNCPEIVTIGLVWDS--EHSDLTEDVVRSLATHLYLPGLFYRVTDENATDSELHLVGMICYTSRHYCAFAFHTKSSKWVFFDDAHVKEMGTRWKDVVSKCIR--CHLQPLL 345
BLAST of EY720038 vs. ExPASy Swiss-Prot
Match: UBP54_RAT (Inactive ubiquitin carboxyl-terminal hydrolase 54 OS=Rattus norvegicus GN=Usp54 PE=2 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.872e-19 Identity = 81/287 (28.22%), Postives = 124/287 (43.21%), Query Frame = 3 Query: 15 CALYEIFTALSIASTDTRKEAVAPT-SLRIALSNLYPDSNFFQEAQMNDASEVLAVIFDCLHRSFTPGSNVSDTESVESNCMGSWDCTNSACIVHSLFGMDIFERMNCYSCGLESRHLKYTSFFHNINASALRTMKVMCAESS-------LDELL-NLVEMNHQLACDPGAGGCEKLNYIHHILSTPPHVFTTVLGWQNTCESF-DDITATLAALSPEIDISILYRGLDPKRRHS---LVSVVCYYGQHYHCFAYSHDQERWIMYDDKTVKXVG-SWSDVLSMCERG 833 CAL IF +S E V P+ +LR AL+ + D FQ M+DA+E + +H +++D + CT CI H F M +FE+ C SCG S L + H I+ ++L + E ELL N M C G E++ I +L P + T L W + +D+ +L D+ +R D + + S LV ++CYYG+HY F + +W+ +DD VK +G W DV++ C +G Sbjct: 77 CALKGIFKQFQCSS-----EKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLLMRIH------FHIADETKEDI-------CTAPHCISHQKFAMTLFEQCVCTSCGATSDPLPFIQMVHYISTTSLCNQAICMLEKREKPSPGMFGELLQNASTMGDLRDCPSNCG--ERIR-IRRVLMNAPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDL--FFRVTDDRAKQSELYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIKG 340 The following BLAST results are available for this feature:
BLAST of EY720038 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720038 ID=EY720038; Name=EY720038; organism=Citrus sinensis; type=EST; length=876bpback to top |