EY720034

Overview
NameEY720034
Unique NameEY720034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL1_ARATH (Squamosa promoter-binding-like protein 1 OS=Arabidopsis thaliana GN=SPL1 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 6.290e-50
Identity = 105/229 (45.85%), Postives = 140/229 (61.14%), Query Frame = 1
Query:   37 TSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPSNGNKSSRVLSLQTEKIMTKVTQQQCRFCEQKVAYRNMRSSLVYRPAMLSMXXXXXXXXXXXLLFKAHPSSLY 723
            +SS   + E+ LLH+AVR+N +PMVE+LL Y P                +     +F+P+  GPAGLTPLH+AA +D +E+VLDALT+DP  VGIEAWK+ +DSTG TP DYA LR H SYIHL+QRKINKKS+    V+++IP S  D + K+ P +G  +S +          ++TQ  C+ C+ K+ Y   R S+ YRPAMLSM           LLFK+ P  LY
Sbjct:  665 SSSNATLSELCLLHRAVRKNSKPMVEMLLRYIP----------------KQQRNSLFRPDAAGPAGLTPLHIAAGKDGSEDVLDALTEDPAMVGIEAWKTCRDSTGFTPEDYARLRGHFSYIHLIQRKINKKSTTEDHVVVNIPVSFSDREQKE-PKSGPMASAL----------EITQIPCKLCDHKLVYGTTRRSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLY 866          

HSP 2 Score: 21.9422 bits (45), Expect = 6.290e-50
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  713 VLYIFRAFXWE 745
            VLY+F+ F WE
Sbjct:  864 VLYVFQPFRWE 874          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL12_ARATH (Squamosa promoter-binding-like protein 12 OS=Arabidopsis thaliana GN=SPL12 PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 5.013e-43
Identity = 102/239 (42.68%), Postives = 142/239 (59.41%), Query Frame = 1
Query:   13 GTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPSNGNKSSRVLSLQTEKIMTKVTQ-QQCRFCEQK-VAYRNMRSSLVYRPAMLSMXXXXXXXXXXXLLFKAHPSSLY 723
            GTVD     S + A+ E+ LLH+AVR+N +PMVE+LL ++P         ++ Q +       +F+P+  GP GLTPLH+AA +D +E+VLDALT+DPG  GI+AWK+++D+TG TP DYA LR H SYIHLVQRK+++K      V+++IP S      ++K S  + SS            ++TQ  QC+ C+ K V       S+ YRPAMLSM           LLFK+ P  LY
Sbjct:  702 GTVDP----SPDAALSELCLLHRAVRKNSKPMVEMLLRFSP--------KKKNQTL-----AGLFRPDAAGPGGLTPLHIAAGKDGSEDVLDALTEDPGMTGIQAWKNSRDNTGFTPEDYARLRGHFSYIHLVQRKLSRKPIAKEHVVVNIPESFNIEHKQEKRSPMDSSS-----------LEITQINQCKLCDHKRVFVTTHHKSVAYRPAMLSMVAIAAVCVCVALLFKSCPEVLY 912          

HSP 2 Score: 21.9422 bits (45), Expect = 5.013e-43
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 2
Query:  713 VLYIFRAFXWE 745
            VLY+F+ F WE
Sbjct:  910 VLYVFQPFRWE 920          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL6_ORYSJ (Squamosa promoter-binding-like protein 6 OS=Oryza sativa subsp. japonica GN=SPL6 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.941e-30
Identity = 85/217 (39.17%), Postives = 119/217 (54.84%), Query Frame = 1
Query:   13 GTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPSNGNKSSRVLSLQTEKIMTKVTQQQCRFC-EQKVAYRNMRS-SLVYRPAMLSM 657
            G VD G  +  E+ + E  LLH AVR     MV  LL Y P+  L            R    F+F+P+  GP+  TPLH+AA  DDAE+VLDALT+DPG VGI  W++A+D  G TP DYA  R + +Y+++V++KINK   + G V+L +P SI         ++G K   V SL+   +        C  C  Q + Y N  + + +YRPAML++
Sbjct:  737 GLVDIGSQSPEEVVLSE-NLLHAAVRMKSAQMVRFLLGYKPNESLK-----------RTAETFLFRPDAQGPSKFTPLHIAAATDDAEDVLDALTNDPGLVGINTWRNARDGAGFTPEDYARQRGNDAYLNMVEKKINKHLGK-GHVVLGVPSSI-----HPVITDGVKPGEV-SLEI-GMTVPPPAPSCNACSRQALMYPNSTARTFLYRPAMLTV 933          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL1_ORYSJ (Squamosa promoter-binding-like protein 1 OS=Oryza sativa subsp. japonica GN=SPL1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.258e-29
Identity = 84/239 (35.15%), Postives = 131/239 (54.81%), Query Frame = 1
Query:   10 RGTVDTGDHTSSELAILEMGLLHKAVRRNCRPMVELLLNYAPDNV-LDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPSNGNKSSRVLSLQTEK---IMTKVTQQQCRFCEQKVAYR-NMRSSLVYRPAMLSMXXXXXXXXXXXLLFKAHP 711
            +G VD    ++ E  +L+  L+  AV +  +P+++ LL Y   +  +D   S        A + F+F P++ GP+ +TPLH+AA   D   VLDALTDDP  +GI+AWK+A+D+TGLTP DYA  R H SYI +VQ KI+ +  ++  V + I  +    D  +K ++ +K++   +   EK   I TK     CR C  ++AYR ++   L  RPA+LS+           L+ +  P
Sbjct:  615 QGGVDLDVQSTVEF-VLKQDLVFVAVNKRSKPLIDFLLTYTTSSAPMDGTESA-------APAQFLFTPDIAGPSDITPLHIAATYSDTAGVLDALTDDPQQLGIKAWKNARDATGLTPEDYARKRGHESYIEMVQNKIDSRLPKA-HVSVTISSTTSTTDFTEKHASQSKTTDQTAFDVEKGQQISTK-PPLSCRQCLPELAYRHHLNRFLSTRPAVLSLVAIAAVCVCVGLIMQGPP 843          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL14_ARATH (Squamosa promoter-binding-like protein 14 OS=Arabidopsis thaliana GN=SPL14 PE=2 SV=3)

HSP 1 Score: 110.923 bits (276), Expect = 1.032e-23
Identity = 63/159 (39.62%), Postives = 98/159 (61.64%), Query Frame = 1
Query:   55 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWD--SKQKPSNGNKSS 525
            + E+ LL++AV+R    MVELL++Y   N L    SR+          F+F PN+ GP G+TPLH+AAC   +++++D LT+DP  +G+ +W + +D+TG TP  YA++R +H+Y  LV RK+  K ++  +V L+I   +VD    SK+     NKSS
Sbjct:  822 LAEIQLLNRAVKRKSTKMVELLIHYLV-NPLTLSSSRK----------FVFLPNITGPGGITPLHLAACTSGSDDMIDLLTNDPQEIGLSSWNTLRDATGQTPYSYAAIRNNHNYNSLVARKLADKRNK--QVSLNIEHEVVDQTGLSKRLSLEMNKSS 967          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL16_ARATH (Squamosa promoter-binding-like protein 16 OS=Arabidopsis thaliana GN=SPL16 PE=2 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.651e-19
Identity = 50/141 (35.46%), Postives = 84/141 (59.57%), Query Frame = 1
Query:   55 ILEMGLLHKAVRRNCRPMVELLLNYAPDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSI 477
            + ++ LL++A++R    M E L++Y+ +     P +R           FIF P++ GP  +TPLH+AA    +++++DALT+DP  +G+  W +  D+TG TP  YA++R +HSY  LV RK+  K   +G++ L+I   I
Sbjct:  783 LADIQLLNRAIKRRNTKMAETLIHYSVN-----PSTRN----------FIFLPSIAGPGDITPLHLAASTSSSDDMIDALTNDPQEIGLSCWNTLVDATGQTPFSYAAMRDNHSYNTLVARKLADK--RNGQISLNIENGI 906          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSJ (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. japonica GN=SPL15 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.704e-18
Identity = 67/203 (33.00%), Postives = 101/203 (49.75%), Query Frame = 1
Query:   61 EMGLLHKAVRRNCRPMVELLLNYA---PDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPSNGNKSSRVLSLQTEKIMTKVTQQQCRFCEQKVAYRNMRS-SLVYRPAMLSM 657
            E+ LL++AV+R    M  LL+ +    PD+    P                F PNV GP GLTPLH+AA  +DA +++DALTDDP  +G+  W SA D  G +P  YA LR +++Y  LV +K+  +  ++ +V + +    +  D        NKS+ + +LQ           QC   +  +  R M S  L+ RP + SM
Sbjct:  927 EIHLLNRAVKRKSSHMARLLVQFVVVCPDDSKLYP----------------FLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDR--KNNQVTIMVGKEEIHMDQSGNVGEKNKSA-IQALQIRSC------NQCAILDAGLLRRPMHSRGLLARPYIHSM 1104          
BLAST of EY720034 vs. ExPASy Swiss-Prot
Match: SPL15_ORYSI (Squamosa promoter-binding-like protein 15 OS=Oryza sativa subsp. indica GN=SPL15 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.704e-18
Identity = 67/203 (33.00%), Postives = 101/203 (49.75%), Query Frame = 1
Query:   61 EMGLLHKAVRRNCRPMVELLLNYA---PDNVLDKPGSRQKQLVDRAHSGFIFKPNVIGPAGLTPLHVAACRDDAENVLDALTDDPGSVGIEAWKSAQDSTGLTPNDYASLRAHHSYIHLVQRKINKKSSESGRVILDIPGSIVDWDSKQKPSNGNKSSRVLSLQTEKIMTKVTQQQCRFCEQKVAYRNMRS-SLVYRPAMLSM 657
            E+ LL++AV+R    M  LL+ +    PD+    P                F PNV GP GLTPLH+AA  +DA +++DALTDDP  +G+  W SA D  G +P  YA LR +++Y  LV +K+  +  ++ +V + +    +  D        NKS+ + +LQ           QC   +  +  R M S  L+ RP + SM
Sbjct:  927 EIHLLNRAVKRKSSHMARLLVQFVVVCPDDSKLYP----------------FLPNVAGPGGLTPLHLAASIEDAVDIVDALTDDPQQIGLSCWHSALDDDGQSPETYAKLRNNNAYNELVAQKLVDR--KNNQVTIMVGKEEIHMDQSGNVGEKNKSA-IQALQIRSC------NQCAILDAGLLRRPMHSRGLLARPYIHSM 1104          
The following BLAST results are available for this feature:
BLAST of EY720034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
SPL1_ARATH6.290e-5045.85Squamosa promoter-binding-like protein 1 OS=Arabid... [more]
SPL12_ARATH5.013e-4342.68Squamosa promoter-binding-like protein 12 OS=Arabi... [more]
SPL6_ORYSJ1.941e-3039.17Squamosa promoter-binding-like protein 6 OS=Oryza ... [more]
SPL1_ORYSJ1.258e-2935.15Squamosa promoter-binding-like protein 1 OS=Oryza ... [more]
SPL14_ARATH1.032e-2339.62Squamosa promoter-binding-like protein 14 OS=Arabi... [more]
SPL16_ARATH7.651e-1935.46Squamosa promoter-binding-like protein 16 OS=Arabi... [more]
SPL15_ORYSJ1.704e-1833.00Squamosa promoter-binding-like protein 15 OS=Oryza... [more]
SPL15_ORYSI1.704e-1833.00Squamosa promoter-binding-like protein 15 OS=Oryza... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-B07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720034 ID=EY720034; Name=EY720034; organism=Citrus sinensis; type=EST; length=920bp
CCACGCGTCCGCGGAACAGTTGATACAGGAGACCATACTTCCTCTGAGCT
TGCAATATTAGAGATGGGTCTCCTTCACAAAGCAGTCCGGAGAAATTGCA
GGCCTATGGTGGAACTATTGTTAAATTATGCCCCCGATAATGTATTGGAT
AAACCAGGATCTCGGCAGAAGCAACTGGTGGACAGGGCTCACAGCGGCTT
TATTTTTAAACCCAATGTTATTGGGCCGGCTGGATTGACTCCACTTCATG
TTGCAGCATGTAGGGATGATGCAGAGAATGTGTTGGATGCCTTAACTGAT
GATCCTGGATCGGTGGGGATAGAAGCTTGGAAGAGTGCCCAAGACAGCAC
AGGTTTGACCCCAAATGATTATGCGAGTCTGCGAGCCCACCACTCATATA
TCCATCTAGTGCAAAGGAAAATCAACAAGAAATCATCAGAAAGTGGGCGT
GTGATCCTAGATATACCTGGTAGCATTGTTGACTGGGATTCCAAGCAGAA
ACCGTCGAACGGGAATAAATCATCTCGAGTTCTCAGCTTGCAGACTGAAA
AGATCATGACCAAAGTGACGCAGCAGCAATGCAGGTTTTGTGAACAGAAG
GTGGCTTATAGAAACATGAGATCATCACTGGTATACAGGCCTGCAATGCT
CTCAATGGTGGCCATTGCAGCTGTCTGTGTTTGCGTGGCACTGCTCTTCA
AAGCTCACCCGAGTTCTTTATATTTTCCGGGCATTCANGTGGGAATTNGC
TCAGTATGGGTCTANGTAAGGNAGTTATTATACTTATTTAGTCCTGCAGG
CAGCATGCTGGACTTTTTTCTCTTGCCCTCTTTTTTGTTTCCTCCTCCNT
CATATGAGCGCTAGAAGCCTGCTTATTTGNATGGATTAGAAATTCGGAGA
AAATAAGTACTGTATATGTG
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