EY720033

Overview
NameEY720033
Unique NameEY720033
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720033 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 4.634e-21
Identity = 91/272 (33.46%), Postives = 126/272 (46.32%), Query Frame = 1
Query:   34 LESLDISGCQSLMCLSRRGRLSTV-LRRLKIQTCPKLKSLSSSEGQLPVAIKHLEVQNCAELTTLSSTG--KLPEALQYLSI-ADCPQLESIAESFHDNAALVFILIGNCRKLQSVPNAL-HKLISLDEMYIRNCPSLVSFPDERLPNQNLRVIEISRCEELRALPSGVERLNSLQVLDISLCPRIVGIPASGLPTNLTSLSIE--DLKMPLSCWGLHKLTSLRKLEIRGCPSAL-SFPEVSVRMRLPHTLTELNIGRFPMLHCLSSERFQN 825
            L+SL I  C  L  L      S   L  L I  C  L+S   S    P  +K L +++C +L    S    +    L+YL I + C  L +   S       + I      K  S+   L    I+L+ + IR+CP+L +FP   LP   L  + +S C++L+ALP  +  L SL  L I  CP I  IP  G P+NL +L I   D   P   WGL  L +LR LEI G    + SFPE  +   LP ++  L I RF  L  L+ + F +
Sbjct: 1093 LQSLHIDSCDGLTSLPENLTESYPNLHELLIIACHSLESFPGSHP--PTTLKTLYIRDCKKLNFTESLQPTRSYSQLEYLFIGSSCSNLVNFPLSLFPKLRSLSIRDCESFKTFSIHAGLGDDRIALESLEIRDCPNLETFPQGGLPTPKLSSMLLSNCKKLQALPEKLFGLTSLLSLFIIKCPEIETIPGGGFPSNLRTLCISLCDKLTPRIEWGLRDLENLRNLEIDGGNEDIESFPEEGL---LPKSVFSLRISRFENLKTLNRKGFHD 1359          
BLAST of EY720033 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 73/269 (27.14%), Postives = 118/269 (43.87%), Query Frame = 1
Query:    1 PRVRNNTSLSLLESLDISGCQSLMCLSRRGRLSTVLRRLKIQTCPKLKSLSSSEGQLPV---------------AIKHLEVQ---NCAELTTLSSTGKLPEALQYLSIADCPQLESIAESFHDNAALVFILIGNCRKLQSVPNA-------LHKLISLDEMYIRNCPSLVSFPDERLPN-QNLRVIEISRCEELRALPSGVERLNSLQVLDISLCPRIVGIPASGLP--TNLTSLSIEDLKMPLSCW--GLHKLTSLRKLEIRGCPSAL 717
            P   N++ L  + S+ ISGC++  CL   G L            P L+SL   +G + V               +++ L +    N   L  +    + P  L+ + I+DCP               VF  + + +KL+    A       +  L +L  + I +  ++ S  +E   N +NL  + +S  E L+ LP+ +  LN+L+ LDI  C  +  +P  GL   ++LT L +E   M L C   GL  LT+L  L+IRGCP  +
Sbjct:  727 PDWMNHSVLKNVVSILISGCENCSCLPPFGEL------------PCLESLELQDGSVEVEYVEDSGFLTRRRFPSLRKLHIGGFCNLKGLQRMKGAEQFP-VLEEMKISDCPMF-------------VFPTLSSVKKLEIWGEADAGGLSSISNLSTLTSLKIFSNHTVTSLLEEMFKNLENLIYLSVSFLENLKELPTSLASLNNLKCLDIRYCYALESLPEEGLEGLSSLTELFVEHCNM-LKCLPEGLQHLTTLTSLKIRGCPQLI 968          
BLAST of EY720033 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 6.707e-12
Identity = 49/132 (37.12%), Postives = 66/132 (50.00%), Query Frame = 1
Query:  397 LDEMYIRNCPSLV--------------------SFPDERLPN-QNLRVIEISRCEELRALPSGVERLNSLQVLDISLCPRIVGIPASGLP--TNLTSLSIEDLKMPLSCW--GLHKLTSLRKLEIRGCPSAL 717
            L+EM I  CP L                     SFP+E   N  NL+ + ISRC  L+ LP+ +  LN+L+ L I LC  +  +P  GL   ++LT L +E   M L C   GL  LT+L  L+IRGCP  +
Sbjct:  816 LEEMIIHECPFLTLSSNLRALTSLRICYNKVATSFPEEMFKNLANLKYLTISRCNNLKELPTSLASLNALKSLKIQLCCALESLPEEGLEGLSSLTELFVEHCNM-LKCLPEGLQHLTTLTSLKIRGCPQLI 946          
BLAST of EY720033 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.416e-11
Identity = 51/184 (27.72%), Postives = 96/184 (52.17%), Query Frame = 1
Query:    1 PRVRNNTSLSLLESLDISGCQSLMCLSRRGRLSTVLRRLKIQTCPKLKSLSSSEGQLPVAIKHLEVQNCAELTTLSSTGKLPEALQYLSIADCPQLESIAESFHDNAALVFILIGNCRKLQSVPNALHKLISLDEMYIRNCPSLVSFPDERLPNQNLRVIEISRCEELRALPSGVERLNSLQVL 552
            PR+ + T+L   E +D+ GC SL+ LS+       L  L ++ C KL+++ S      V ++ LEV N +  + L +  ++   ++ L +     ++ I  S  +   L  + + N R L+++P +++KL  L+ + +  C SL  FPD     + LR +++SR  +++ LPS +  L +L  L
Sbjct: 1275 PRLSSATNL---EHIDLEGCNSLLSLSQSISYLKKLVFLNLKGCSKLENIPSM-----VDLESLEVLNLSGCSKLGNFPEISPNVKELYMGG-TMIQEIPSSIKNLVLLEKLDLENSRHLKNLPTSIYKLKHLETLNLSGCISLERFPDSSRRMKCLRFLDLSR-TDIKELPSSISYLTALDEL 1448          
The following BLAST results are available for this feature:
BLAST of EY720033 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
DRL21_ARATH4.634e-2133.46Putative disease resistance protein At3g14460 OS=A... [more]
RGA3_SOLBU3.011e-1227.14Putative disease resistance protein RGA3 OS=Solanu... [more]
RGA2_SOLBU6.707e-1237.12Disease resistance protein RGA2 OS=Solanum bulboca... [more]
WRK19_ARATH7.416e-1127.72Probable WRKY transcription factor 19 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-B06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720033 ID=EY720033; Name=EY720033; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCAACAACACCAGCTTGTCTCTTCTAGAGAGTTTGGATAT
CTCTGGCTGTCAATCTCTGATGTGCCTATCACGGAGAGGCCGGTTATCTA
CAGTTCTCAGACGCCTTAAGATTCAGACTTGTCCAAAGCTTAAGAGCTTA
TCATCATCAGAAGGCCAGTTACCTGTTGCAATCAAACATCTTGAGGTTCA
AAATTGTGCGGAGCTTACTACTTTATCATCAACAGGAAAATTACCCGAGG
CCCTTCAATACCTCAGCATTGCTGATTGTCCACAGCTTGAGTCAATAGCG
GAAAGTTTTCATGATAACGCAGCACTCGTATTTATTTTGATTGGAAACTG
CAGAAAGCTTCAATCCGTACCCAATGCTCTACACAAGCTTATCAGTCTTG
ATGAAATGTATATTCGTAATTGTCCAAGTCTTGTTTCTTTTCCAGATGAA
AGACTTCCAAACCAAAATTTGAGAGTTATTGAAATCAGCAGATGCGAGGA
ACTTAGAGCACTTCCCAGTGGCGTGGAAAGACTCAACTCTCTTCAAGTAT
TAGACATAAGCCTGTGTCCAAGGATCGTAGGCATTCCAGCAAGTGGTCTT
CCAACCAATCTAACCTCACTTTCAATTGAAGATCTTAAAATGCCATTGTC
TTGTTGGGGGTTGCACAAGCTCACGTCTCTTAGAAAGCTTGAGATTAGAG
GATGTCCNAGTGCATTGTCTTTTCCAGAGGTGTCGGTGAGAATGAGGCTG
CCCCACACTCTAACTGAGCTGAATATTGGCAGATTTCCGATGCTACATTG
CTTATCTTCGGAGAGGTTTCAGAACCTTACTTTCTCTTGATAATTGTCAT
CAGTGAGTGCCCAGGCTCAAATCTTTTCATGGGAGGGCTGGCAT
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