EY720025

Overview
NameEY720025
Unique NameEY720025
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length432
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11247 contig Csv1_Contig11247:2..433. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720025 vs. ExPASy Swiss-Prot
Match: QOR_PSEAE (Quinone oxidoreductase OS=Pseudomonas aeruginosa GN=qor PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 1.466e-12
Identity = 34/66 (51.52%), Postives = 51/66 (77.27%), Query Frame = -3
Query:  233 LYVTRPSLGVHVNTLAKLQAASEELFDLVLKKRIKVRIDQRYSLEQAGEAQTALASRKTTGATVLM 430
            LYVTRP+LG + +T  KLQA ++ELF L+ +  I++ I+QR++L +A  A T LA+R+TTG+TVL+
Sbjct:  259 LYVTRPTLGSYADTPEKLQAMADELFGLIERGDIRIEINQRFALAEAARAHTELAARRTTGSTVLL 324          
The following BLAST results are available for this feature:
BLAST of EY720025 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
QOR_PSEAE1.466e-1251.52Quinone oxidoreductase OS=Pseudomonas aeruginosa G... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-001-A09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720025 ID=EY720025; Name=EY720025; organism=Citrus sinensis; type=EST; length=432bp
TCATGTATTCCCGGATGGCGGCCAGTTCCGGACGGCCGGAGGCGGAGGAA
GGGGCGGACGGCATGCGTGAGGCTCCAACGGATAGGGTGAGGCCAGGATA
GCAACGGCCCACCGTGCTGGCTTGTCCGCCCGTGCATGGCGATTTGTCCC
GGTGCGCACGGCAAAAAAAAAGCGGGACGCGCCATGCGTCCCGCCTTGCC
CGCGGCGCCAGGGGCGCGCCGGATCAGTCCAGCATCAGCACCGTGGCGCC
GGTGGTCTTGCGCGAGGCCAGCGCGGTCTGCGCTTCGCCGGCCTGTTCCA
GGCTGTAGCGCTGGTCGATGCGGACCTTGATCCTCTTCTTCAGCACCAGG
TCGAACAGCTCTTCCGAGGCGGCCTGCAGCTTTGCCAGCGTATTGACGTG
CACGCCCAGCGACGGCCGCGTCACGTACAGGC
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